BLASTX nr result

ID: Cocculus23_contig00059024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00059024
         (314 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282238.1| PREDICTED: WD repeat-containing protein 11-l...    42   8e-06
emb|CBI28216.3| unnamed protein product [Vitis vinifera]               42   8e-06

>ref|XP_002282238.1| PREDICTED: WD repeat-containing protein 11-like [Vitis vinifera]
          Length = 1317

 Score = 42.4 bits (98), Expect(2) = 8e-06
 Identities = 18/35 (51%), Positives = 25/35 (71%)
 Frame = +1

Query: 172  PCLSPEHADINAIGKYYE*CQRKLLRHCQDTQPLF 276
            P L PE+ D+ A+G++YE  QRKL+  C D+QP F
Sbjct: 1282 PGLDPENEDVIAVGEFYEQYQRKLVHLCMDSQPSF 1316



 Score = 32.7 bits (73), Expect(2) = 8e-06
 Identities = 15/37 (40%), Positives = 27/37 (72%)
 Frame = +2

Query: 8    SGALPEVLKALQDAQRPETAVMFYMSPMKLLQKIPTN 118
            +GAL E L AL++A+ P+TA MF ++  ++ ++I +N
Sbjct: 1226 AGALQEALAALREAKLPDTAAMFIVACREIHEEIISN 1262


>emb|CBI28216.3| unnamed protein product [Vitis vinifera]
          Length = 1250

 Score = 42.4 bits (98), Expect(2) = 8e-06
 Identities = 18/35 (51%), Positives = 25/35 (71%)
 Frame = +1

Query: 172  PCLSPEHADINAIGKYYE*CQRKLLRHCQDTQPLF 276
            P L PE+ D+ A+G++YE  QRKL+  C D+QP F
Sbjct: 1215 PGLDPENEDVIAVGEFYEQYQRKLVHLCMDSQPSF 1249



 Score = 32.7 bits (73), Expect(2) = 8e-06
 Identities = 15/37 (40%), Positives = 27/37 (72%)
 Frame = +2

Query: 8    SGALPEVLKALQDAQRPETAVMFYMSPMKLLQKIPTN 118
            +GAL E L AL++A+ P+TA MF ++  ++ ++I +N
Sbjct: 1159 AGALQEALAALREAKLPDTAAMFIVACREIHEEIISN 1195


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