BLASTX nr result
ID: Cocculus23_contig00058617
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00058617
(238 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU24733.1| hypothetical protein MIMGU_mgv1a026080mg, partial... 75 1e-11
gb|ABV65193.1| NADH-plastoquinone oxidoreductase subunit 5, part... 70 2e-10
gb|ADZ45877.1| NdhF, partial (chloroplast) [Iris boissieri] 70 3e-10
gb|ABB13414.1| NADH dehydrogenase F [Zeugites americanus var. me... 70 4e-10
gb|ABB13415.1| NADH dehydrogenase F [Zeugites americanus var. pr... 70 4e-10
gb|AFJ52751.1| NADH dehydrogenase subunit F, partial (chloroplas... 70 4e-10
gb|ADZ45881.1| NdhF, partial (chloroplast) [Iris caucasica subsp... 70 4e-10
ref|YP_002000532.1| NADH dehydrogenase subunit 5 [Brachypodium d... 70 4e-10
emb|CAO91965.1| NADH dehydrogenase subunit F, partial (chloropla... 70 4e-10
gb|AAU95667.1| NADH dehydrogenase subunit F [Brachypodium pinnatum] 70 4e-10
gb|AAL36501.1| NADH dehydrogenase subunit F [Brachypodium distac... 70 4e-10
sp|Q9TL56.1|NU5C_CARCG RecName: Full=NAD(P)H-quinone oxidoreduct... 69 4e-10
gb|AEX96607.1| NADH-plastoquinone oxidoreductase subunit 5 (chlo... 68 4e-10
gb|AAF08186.1| NADH dehydrogenase subunit F [Liriodendron tulipi... 69 4e-10
emb|CAD23081.1| NADH dehydrogenase subunit F [Dipentodon sinicus... 69 4e-10
gb|AAS75938.1| NADH dehydrogenase subunit F [Cyclanthus bipartitus] 68 4e-10
gb|ABD65640.1| NADH dehydrogenase subunit F [Paepalanthus augustus] 69 4e-10
gb|ABQ95495.1| NADH dehydrogenase subunit F [Paepalanthus chloro... 69 4e-10
gb|ACL50842.1| NADH dehydrogenase subunit F [Reinwardtia indica] 69 4e-10
gb|AHA53736.1| NADH dehydrogenase subunit 5, partial (chloroplas... 69 5e-10
>gb|EYU24733.1| hypothetical protein MIMGU_mgv1a026080mg, partial [Mimulus
guttatus]
Length = 107
Score = 75.1 bits (183), Expect = 1e-11
Identities = 39/65 (60%), Positives = 48/65 (73%)
Frame = +3
Query: 36 IRSYFNSCSKEIL*EVRTLAFSTMFQLGYPTIALGIGSY*AALFHMITHA*PKTLFYLGS 215
IRSYF+SCSK+I R LA+STM QLGY +ALG+GSY + LFH+ITHA K L +LGS
Sbjct: 23 IRSYFSSCSKDIK---RGLAYSTMSQLGYMILALGMGSYRSVLFHLITHAYSKVLLFLGS 79
Query: 216 RSITH 230
+ H
Sbjct: 80 GFVIH 84
>gb|ABV65193.1| NADH-plastoquinone oxidoreductase subunit 5, partial (chloroplast)
[Elaeagnus sp. Nickrent 2898]
Length = 668
Score = 69.7 bits (169), Expect(2) = 2e-10
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +3
Query: 84 RTLAFSTMFQLGYPTIALGIGSY*AALFHMITHA*PKTLFYLGSRSITHQI 236
RTLA+STM QLGY +ALGIGSY AALFH+ITHA K L +LGS SI H +
Sbjct: 285 RTLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSIIHSM 335
Score = 21.2 bits (43), Expect(2) = 2e-10
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1
Query: 34 ILGATLTLAQK 66
+LGATL LAQK
Sbjct: 271 LLGATLALAQK 281
>gb|ADZ45877.1| NdhF, partial (chloroplast) [Iris boissieri]
Length = 727
Score = 70.1 bits (170), Expect = 3e-10
Identities = 35/51 (68%), Positives = 41/51 (80%)
Frame = +3
Query: 84 RTLAFSTMFQLGYPTIALGIGSY*AALFHMITHA*PKTLFYLGSRSITHQI 236
R+LA+STM QLGY T+ALGIGSY AALFH+ITHA K L +LGS SI H +
Sbjct: 300 RSLAYSTMSQLGYITLALGIGSYRAALFHLITHAYSKALLFLGSGSIIHSM 350
>gb|ABB13414.1| NADH dehydrogenase F [Zeugites americanus var. mexicanus]
Length = 678
Score = 69.7 bits (169), Expect = 4e-10
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +3
Query: 84 RTLAFSTMFQLGYPTIALGIGSY*AALFHMITHA*PKTLFYLGSRSITHQI 236
RTLA+STM QLGY +ALGIGSY AALFH+ITHA K L +LGS SI H +
Sbjct: 296 RTLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSIIHSM 346
>gb|ABB13415.1| NADH dehydrogenase F [Zeugites americanus var. pringlei]
Length = 674
Score = 69.7 bits (169), Expect = 4e-10
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +3
Query: 84 RTLAFSTMFQLGYPTIALGIGSY*AALFHMITHA*PKTLFYLGSRSITHQI 236
RTLA+STM QLGY +ALGIGSY AALFH+ITHA K L +LGS SI H +
Sbjct: 292 RTLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSIIHSM 342
>gb|AFJ52751.1| NADH dehydrogenase subunit F, partial (chloroplast) [Borismene
japurensis]
Length = 678
Score = 69.7 bits (169), Expect = 4e-10
Identities = 34/51 (66%), Positives = 41/51 (80%)
Frame = +3
Query: 84 RTLAFSTMFQLGYPTIALGIGSY*AALFHMITHA*PKTLFYLGSRSITHQI 236
R+LA+STM QLGY T+ALG+GSY AALFH+ITHA K L +LGS SI H +
Sbjct: 308 RSLAYSTMSQLGYTTLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSM 358
>gb|ADZ45881.1| NdhF, partial (chloroplast) [Iris caucasica subsp. turcica]
Length = 714
Score = 69.7 bits (169), Expect = 4e-10
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = +3
Query: 84 RTLAFSTMFQLGYPTIALGIGSY*AALFHMITHA*PKTLFYLGSRSITHQI 236
R+LA+STM +LGYP +ALGIGSY AALFH+ITHA K L +LGS S+ H +
Sbjct: 294 RSLAYSTMSRLGYPMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSM 344
>ref|YP_002000532.1| NADH dehydrogenase subunit 5 [Brachypodium distachyon]
gi|221272273|sp|B3TN96.1|NU5C_BRADI RecName:
Full=NAD(P)H-quinone oxidoreductase subunit 5,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 5; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 5 gi|193075601|gb|ACF08684.1|
NADH dehydrogenase subunit 5 (chloroplast) [Brachypodium
distachyon]
Length = 741
Score = 69.7 bits (169), Expect = 4e-10
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +3
Query: 84 RTLAFSTMFQLGYPTIALGIGSY*AALFHMITHA*PKTLFYLGSRSITHQI 236
RTLA+STM QLGY +ALGIGSY AALFH+ITHA K L +LGS SI H +
Sbjct: 317 RTLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSIIHSM 367
>emb|CAO91965.1| NADH dehydrogenase subunit F, partial (chloroplast) [Brachypodium
pinnatum]
Length = 702
Score = 69.7 bits (169), Expect = 4e-10
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +3
Query: 84 RTLAFSTMFQLGYPTIALGIGSY*AALFHMITHA*PKTLFYLGSRSITHQI 236
RTLA+STM QLGY +ALGIGSY AALFH+ITHA K L +LGS SI H +
Sbjct: 310 RTLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSIIHSM 360
>gb|AAU95667.1| NADH dehydrogenase subunit F [Brachypodium pinnatum]
Length = 717
Score = 69.7 bits (169), Expect = 4e-10
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +3
Query: 84 RTLAFSTMFQLGYPTIALGIGSY*AALFHMITHA*PKTLFYLGSRSITHQI 236
RTLA+STM QLGY +ALGIGSY AALFH+ITHA K L +LGS SI H +
Sbjct: 293 RTLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSIIHSM 343
>gb|AAL36501.1| NADH dehydrogenase subunit F [Brachypodium distachyon]
Length = 690
Score = 69.7 bits (169), Expect = 4e-10
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +3
Query: 84 RTLAFSTMFQLGYPTIALGIGSY*AALFHMITHA*PKTLFYLGSRSITHQI 236
RTLA+STM QLGY +ALGIGSY AALFH+ITHA K L +LGS SI H +
Sbjct: 306 RTLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSIIHSM 356
>sp|Q9TL56.1|NU5C_CARCG RecName: Full=NAD(P)H-quinone oxidoreductase subunit 5,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 5; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 5 gi|6424838|gb|AAF08173.1| NADH
dehydrogenase subunit F [Carpenteria californica]
Length = 743
Score = 68.6 bits (166), Expect(2) = 4e-10
Identities = 32/51 (62%), Positives = 41/51 (80%)
Frame = +3
Query: 84 RTLAFSTMFQLGYPTIALGIGSY*AALFHMITHA*PKTLFYLGSRSITHQI 236
R+LA+STM QLGY +ALG+GSY +ALFH+ITHA PK L +LGS S+ H +
Sbjct: 317 RSLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYPKALLFLGSGSVIHSM 367
Score = 21.2 bits (43), Expect(2) = 4e-10
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1
Query: 34 ILGATLTLAQK 66
+LGATL LAQK
Sbjct: 303 LLGATLALAQK 313
>gb|AEX96607.1| NADH-plastoquinone oxidoreductase subunit 5 (chloroplast)
[Haworthia cymbiformis]
Length = 738
Score = 67.8 bits (164), Expect(2) = 4e-10
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = +3
Query: 84 RTLAFSTMFQLGYPTIALGIGSY*AALFHMITHA*PKTLFYLGSRSITHQI 236
R+LA+STM QLGY +ALGIGSY AALFH+ITHA K L +LGS SI H +
Sbjct: 317 RSLAYSTMSQLGYIMLALGIGSYRAALFHLITHAYSKALLFLGSGSIIHSM 367
Score = 21.9 bits (45), Expect(2) = 4e-10
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +1
Query: 34 ILGATLTLAQK 66
+LGATLTLAQ+
Sbjct: 303 LLGATLTLAQR 313
>gb|AAF08186.1| NADH dehydrogenase subunit F [Liriodendron tulipifera]
Length = 732
Score = 68.6 bits (166), Expect(2) = 4e-10
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = +3
Query: 84 RTLAFSTMFQLGYPTIALGIGSY*AALFHMITHA*PKTLFYLGSRSITHQI 236
R+LA+STM QLGY +ALGIGSY AALFH+ITHA K L +LGS SI H +
Sbjct: 308 RSLAYSTMSQLGYTMLALGIGSYRAALFHLITHAYSKALLFLGSGSIIHSM 358
Score = 21.2 bits (43), Expect(2) = 4e-10
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1
Query: 34 ILGATLTLAQK 66
+LGATL LAQK
Sbjct: 294 LLGATLALAQK 304
>emb|CAD23081.1| NADH dehydrogenase subunit F [Dipentodon sinicus]
gi|22795808|emb|CAD23109.1| NADH dehydrogenase subunit F
[Dipentodon sinicus]
Length = 718
Score = 68.6 bits (166), Expect(2) = 4e-10
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = +3
Query: 84 RTLAFSTMFQLGYPTIALGIGSY*AALFHMITHA*PKTLFYLGSRSITHQI 236
R+LA+STM QLGY +ALGIGSY AALFH+ITHA K L +LGS SI H +
Sbjct: 297 RSLAYSTMSQLGYTMLALGIGSYRAALFHLITHAYSKALLFLGSGSIIHSM 347
Score = 21.2 bits (43), Expect(2) = 4e-10
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1
Query: 34 ILGATLTLAQK 66
+LGATL LAQK
Sbjct: 283 LLGATLALAQK 293
>gb|AAS75938.1| NADH dehydrogenase subunit F [Cyclanthus bipartitus]
Length = 684
Score = 67.8 bits (164), Expect(2) = 4e-10
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = +3
Query: 84 RTLAFSTMFQLGYPTIALGIGSY*AALFHMITHA*PKTLFYLGSRSITHQI 236
R+LA+STM QLGY +ALGIGSY AALFH+ITHA K L +LGS SI H +
Sbjct: 304 RSLAYSTMSQLGYIMLALGIGSYRAALFHLITHAYSKALLFLGSGSIIHSM 354
Score = 21.9 bits (45), Expect(2) = 4e-10
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +1
Query: 34 ILGATLTLAQK 66
+LGATLTLAQ+
Sbjct: 290 LLGATLTLAQR 300
>gb|ABD65640.1| NADH dehydrogenase subunit F [Paepalanthus augustus]
Length = 533
Score = 68.9 bits (167), Expect(2) = 4e-10
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +3
Query: 84 RTLAFSTMFQLGYPTIALGIGSY*AALFHMITHA*PKTLFYLGSRSITHQI 236
R+LA+STM QLGY +ALGIGSY AALFH+ITHA K L +LGS SI H I
Sbjct: 162 RSLAYSTMSQLGYIMLALGIGSYRAALFHLITHAYSKALLFLGSGSIIHSI 212
Score = 20.8 bits (42), Expect(2) = 4e-10
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1
Query: 34 ILGATLTLAQK 66
ILGATL LAQ+
Sbjct: 148 ILGATLALAQR 158
>gb|ABQ95495.1| NADH dehydrogenase subunit F [Paepalanthus chlorocephalus]
Length = 482
Score = 68.9 bits (167), Expect(2) = 4e-10
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +3
Query: 84 RTLAFSTMFQLGYPTIALGIGSY*AALFHMITHA*PKTLFYLGSRSITHQI 236
R+LA+STM QLGY +ALGIGSY AALFH+ITHA K L +LGS SI H I
Sbjct: 162 RSLAYSTMSQLGYIMLALGIGSYRAALFHLITHAYSKALLFLGSGSIIHSI 212
Score = 20.8 bits (42), Expect(2) = 4e-10
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1
Query: 34 ILGATLTLAQK 66
ILGATL LAQ+
Sbjct: 148 ILGATLALAQR 158
>gb|ACL50842.1| NADH dehydrogenase subunit F [Reinwardtia indica]
Length = 146
Score = 68.6 bits (166), Expect(2) = 4e-10
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = +3
Query: 84 RTLAFSTMFQLGYPTIALGIGSY*AALFHMITHA*PKTLFYLGSRSITHQI 236
R+LA+STM QLGY +ALG+GSY AALFH+ITHA K L +LGS SI H I
Sbjct: 33 RSLAYSTMSQLGYTMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSI 83
Score = 21.2 bits (43), Expect(2) = 4e-10
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1
Query: 34 ILGATLTLAQK 66
+LGATL LAQK
Sbjct: 19 LLGATLALAQK 29
>gb|AHA53736.1| NADH dehydrogenase subunit 5, partial (chloroplast) [Mullerochloa
moreheadiana]
Length = 698
Score = 69.3 bits (168), Expect = 5e-10
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = +3
Query: 84 RTLAFSTMFQLGYPTIALGIGSY*AALFHMITHA*PKTLFYLGSRSITHQI 236
RTLA+STM QLGY +ALGIGSY AALFH+ITHA K L +LGS S+ H +
Sbjct: 307 RTLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSM 357