BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00058409
         (252 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containi...   117   2e-24
ref|XP_004140361.1| PREDICTED: pentatricopeptide repeat-containi...   117   2e-24
ref|XP_004301459.1| PREDICTED: pentatricopeptide repeat-containi...   114   1e-23
ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containi...   114   1e-23
emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]   114   1e-23
ref|XP_006482125.1| PREDICTED: pentatricopeptide repeat-containi...   112   5e-23
ref|XP_006430611.1| hypothetical protein CICLE_v10011485mg [Citr...   112   5e-23
ref|XP_002305195.1| pentatricopeptide repeat-containing family p...   112   5e-23
ref|XP_007214531.1| hypothetical protein PRUPE_ppa014874mg, part...   111   1e-22
gb|EYU26093.1| hypothetical protein MIMGU_mgv1a027076mg [Mimulus...   108   8e-22
gb|EXB56945.1| hypothetical protein L484_019990 [Morus notabilis]     108   1e-21
ref|XP_002531188.1| pentatricopeptide repeat-containing protein,...   103   3e-20
ref|XP_007022704.1| Pentatricopeptide repeat (PPR) superfamily p...   100   3e-19
ref|XP_007022703.1| Pentatricopeptide repeat (PPR) superfamily p...   100   3e-19
ref|XP_007022702.1| Pentatricopeptide repeat (PPR) superfamily p...   100   3e-19
ref|XP_007022701.1| Pentatricopeptide repeat superfamily protein...   100   3e-19
ref|XP_007022700.1| Pentatricopeptide repeat superfamily protein...   100   3e-19
ref|XP_006302104.1| hypothetical protein CARUB_v10020095mg [Caps...    97   2e-18
ref|NP_849849.1| pentatricopeptide repeat-containing protein [Ar...    95   1e-17
ref|XP_002887023.1| pentatricopeptide repeat-containing protein ...    94   2e-17

>ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Cucumis sativus]
          Length = 539

 Score =  117 bits (293), Expect = 2e-24
 Identities = 50/83 (60%), Positives = 70/83 (84%)
 Frame = +2

Query: 2   ILDDVAYSMIIYAKLKDNNLESAQELFEEMHKRGFHSNAYLYTLFIGAHCNKGRIDEARR 181
           +LDD+AYS+I+YAK+K  ++ S  E+FEEM +RGF +N+++YTLFIG HC  G+++EA  
Sbjct: 296 VLDDIAYSLIVYAKVKTGSITSTWEVFEEMSERGFQANSFIYTLFIGVHCRGGKVEEAHC 355

Query: 182 LMQEMKNMGLKPYDETYNVLIKG 250
           LMQEM+NMGLKPY ET+N+LI+G
Sbjct: 356 LMQEMENMGLKPYPETFNLLIEG 378


>ref|XP_004140361.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Cucumis sativus]
          Length = 517

 Score =  117 bits (293), Expect = 2e-24
 Identities = 50/83 (60%), Positives = 70/83 (84%)
 Frame = +2

Query: 2   ILDDVAYSMIIYAKLKDNNLESAQELFEEMHKRGFHSNAYLYTLFIGAHCNKGRIDEARR 181
           +LDD+AYS+I+YAK+K  ++ S  E+FEEM +RGF +N+++YTLFIG HC  G+++EA  
Sbjct: 274 VLDDIAYSLIVYAKVKTGSITSTWEVFEEMSERGFQANSFIYTLFIGVHCRGGKVEEAHC 333

Query: 182 LMQEMKNMGLKPYDETYNVLIKG 250
           LMQEM+NMGLKPY ET+N+LI+G
Sbjct: 334 LMQEMENMGLKPYPETFNLLIEG 356


>ref|XP_004301459.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 530

 Score =  114 bits (286), Expect = 1e-23
 Identities = 52/83 (62%), Positives = 69/83 (83%)
 Frame = +2

Query: 2   ILDDVAYSMIIYAKLKDNNLESAQELFEEMHKRGFHSNAYLYTLFIGAHCNKGRIDEARR 181
           +LD +AYS+I+YAK+K  +L SAQ+++EEM KRGF +N+++YTLFI AHC  GRIDEA+ 
Sbjct: 286 VLDTIAYSLIVYAKVKLEDLGSAQQVYEEMLKRGFRANSFVYTLFIEAHCKAGRIDEAQS 345

Query: 182 LMQEMKNMGLKPYDETYNVLIKG 250
           +M EM NM LKPYDE+YN LI+G
Sbjct: 346 MMNEMGNMDLKPYDESYNFLIEG 368


>ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Vitis vinifera]
          Length = 547

 Score =  114 bits (286), Expect = 1e-23
 Identities = 52/83 (62%), Positives = 68/83 (81%)
 Frame = +2

Query: 2   ILDDVAYSMIIYAKLKDNNLESAQELFEEMHKRGFHSNAYLYTLFIGAHCNKGRIDEARR 181
           ILD ++YS+I YAK+K   L+SA E++EEM  RGFH NA++YTLFIG+HC +GRI+EA  
Sbjct: 293 ILDTISYSLIAYAKVKYGTLDSAWEVYEEMLNRGFHPNAFVYTLFIGSHCVEGRIEEANE 352

Query: 182 LMQEMKNMGLKPYDETYNVLIKG 250
           LMQ+M+N GL PYDET+N+LI G
Sbjct: 353 LMQDMENAGLMPYDETFNLLIAG 375


>emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]
          Length = 642

 Score =  114 bits (286), Expect = 1e-23
 Identities = 52/83 (62%), Positives = 68/83 (81%)
 Frame = +2

Query: 2   ILDDVAYSMIIYAKLKDNNLESAQELFEEMHKRGFHSNAYLYTLFIGAHCNKGRIDEARR 181
           ILD ++YS+I YAK+K   L+SA E++EEM  RGFH NA++YTLFIG+HC +GRI+EA  
Sbjct: 293 ILDTISYSLIAYAKVKYGTLDSAWEVYEEMLNRGFHPNAFVYTLFIGSHCVEGRIEEANE 352

Query: 182 LMQEMKNMGLKPYDETYNVLIKG 250
           LMQ+M+N GL PYDET+N+LI G
Sbjct: 353 LMQDMENAGLMPYDETFNLLIAG 375


>ref|XP_006482125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like isoform X1 [Citrus sinensis]
          Length = 553

 Score =  112 bits (280), Expect = 5e-23
 Identities = 52/83 (62%), Positives = 69/83 (83%)
 Frame = +2

Query: 2   ILDDVAYSMIIYAKLKDNNLESAQELFEEMHKRGFHSNAYLYTLFIGAHCNKGRIDEARR 181
           I D +AYS+I+YAK+K  NLESA  ++EEM KRGF +N+++YT FIGA+C  G+I+EA  
Sbjct: 294 IHDTIAYSLIVYAKVKMGNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 353

Query: 182 LMQEMKNMGLKPYDETYNVLIKG 250
           LMQEM+N GLKPYDET+N+LI+G
Sbjct: 354 LMQEMENAGLKPYDETFNLLIEG 376


>ref|XP_006430611.1| hypothetical protein CICLE_v10011485mg [Citrus clementina]
           gi|557532668|gb|ESR43851.1| hypothetical protein
           CICLE_v10011485mg [Citrus clementina]
          Length = 521

 Score =  112 bits (280), Expect = 5e-23
 Identities = 52/83 (62%), Positives = 69/83 (83%)
 Frame = +2

Query: 2   ILDDVAYSMIIYAKLKDNNLESAQELFEEMHKRGFHSNAYLYTLFIGAHCNKGRIDEARR 181
           I D +AYS+I+YAK+K  NLESA  ++EEM KRGF +N+++YT FIGA+C  G+I+EA  
Sbjct: 262 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 321

Query: 182 LMQEMKNMGLKPYDETYNVLIKG 250
           LMQEM+N GLKPYDET+N+LI+G
Sbjct: 322 LMQEMENAGLKPYDETFNLLIEG 344


>ref|XP_002305195.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222848159|gb|EEE85706.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 556

 Score =  112 bits (280), Expect = 5e-23
 Identities = 50/83 (60%), Positives = 71/83 (85%)
 Frame = +2

Query: 2   ILDDVAYSMIIYAKLKDNNLESAQELFEEMHKRGFHSNAYLYTLFIGAHCNKGRIDEARR 181
           ILD VAYS+I+YAK+K  NL SA +++EEM KRGF++N+++YT FIGA+C + RI+EA +
Sbjct: 300 ILDTVAYSLIVYAKVKLGNLNSAMQVYEEMLKRGFNANSFVYTSFIGAYCKEERIEEANQ 359

Query: 182 LMQEMKNMGLKPYDETYNVLIKG 250
           L+QEM+NMGLKPY +T+N L++G
Sbjct: 360 LLQEMENMGLKPYGDTFNFLLEG 382


>ref|XP_007214531.1| hypothetical protein PRUPE_ppa014874mg, partial [Prunus persica]
           gi|462410396|gb|EMJ15730.1| hypothetical protein
           PRUPE_ppa014874mg, partial [Prunus persica]
          Length = 499

 Score =  111 bits (277), Expect = 1e-22
 Identities = 48/83 (57%), Positives = 72/83 (86%)
 Frame = +2

Query: 2   ILDDVAYSMIIYAKLKDNNLESAQELFEEMHKRGFHSNAYLYTLFIGAHCNKGRIDEARR 181
           +LD +AYS+I+YAK+K  ++ SA E++EEM KRGF +N+++YTLF+GAHC +GR++EA+ 
Sbjct: 288 VLDTIAYSLIVYAKVKLGDVCSAWEVYEEMLKRGFRANSFVYTLFMGAHCEEGRMEEAQG 347

Query: 182 LMQEMKNMGLKPYDETYNVLIKG 250
           +M EM+NM LKP+DE+YN+LI+G
Sbjct: 348 MMNEMENMDLKPFDESYNLLIEG 370


>gb|EYU26093.1| hypothetical protein MIMGU_mgv1a027076mg [Mimulus guttatus]
          Length = 541

 Score =  108 bits (270), Expect = 8e-22
 Identities = 48/83 (57%), Positives = 70/83 (84%)
 Frame = +2

Query: 2   ILDDVAYSMIIYAKLKDNNLESAQELFEEMHKRGFHSNAYLYTLFIGAHCNKGRIDEARR 181
           ILD ++YS++I+AK+K  NL++A+E++EEM KRGF  N ++ +LFIGA+C +GRIDEA  
Sbjct: 297 ILDTISYSLVIFAKVKMGNLDNAKEIYEEMLKRGFEENVFVCSLFIGAYCEEGRIDEAVG 356

Query: 182 LMQEMKNMGLKPYDETYNVLIKG 250
           L +EM+++GLKP+DET+N LIKG
Sbjct: 357 LFEEMESLGLKPFDETFNHLIKG 379


>gb|EXB56945.1| hypothetical protein L484_019990 [Morus notabilis]
          Length = 829

 Score =  108 bits (269), Expect = 1e-21
 Identities = 47/82 (57%), Positives = 68/82 (82%)
 Frame = +2

Query: 2   ILDDVAYSMIIYAKLKDNNLESAQELFEEMHKRGFHSNAYLYTLFIGAHCNKGRIDEARR 181
           + D +AYS+I+YAKLK  N+ SAQ+++EEM KRGF +N ++YTLFI A+C +GRIDE   
Sbjct: 468 LFDTIAYSLIVYAKLKLGNIVSAQDVYEEMLKRGFRANPFVYTLFIRAYCKEGRIDETHC 527

Query: 182 LMQEMKNMGLKPYDETYNVLIK 247
           +M++M++MGLKPY+ETYN L++
Sbjct: 528 MMKDMEDMGLKPYEETYNSLVE 549


>ref|XP_002531188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529229|gb|EEF31203.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score =  103 bits (256), Expect = 3e-20
 Identities = 46/83 (55%), Positives = 69/83 (83%)
 Frame = +2

Query: 2   ILDDVAYSMIIYAKLKDNNLESAQELFEEMHKRGFHSNAYLYTLFIGAHCNKGRIDEARR 181
           ILD VAYS+I++AK++  NL+SA E++E M KRGF++N++++T+ IGA+CN G+I++A +
Sbjct: 301 ILDTVAYSLIVFAKVRLGNLDSALEVYEAMLKRGFNANSFVHTVLIGAYCNGGKIEKANQ 360

Query: 182 LMQEMKNMGLKPYDETYNVLIKG 250
           L  EM  MGL+PYDET+N LI+G
Sbjct: 361 LFGEMGTMGLEPYDETFNFLIEG 383


>ref|XP_007022704.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           isoform 5 [Theobroma cacao] gi|508722332|gb|EOY14229.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative isoform 5 [Theobroma cacao]
          Length = 504

 Score =  100 bits (248), Expect = 3e-19
 Identities = 47/83 (56%), Positives = 64/83 (77%)
 Frame = +2

Query: 2   ILDDVAYSMIIYAKLKDNNLESAQELFEEMHKRGFHSNAYLYTLFIGAHCNKGRIDEARR 181
           ILD +AYS +++ KLK  NLE A E+ EEM KRGF +N++L++ FI A+   GRI EA  
Sbjct: 300 ILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIHEAEN 359

Query: 182 LMQEMKNMGLKPYDETYNVLIKG 250
           +++EM+NMGLKPYDET+N LI+G
Sbjct: 360 VLREMENMGLKPYDETFNYLIEG 382


>ref|XP_007022703.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           isoform 4 [Theobroma cacao] gi|508722331|gb|EOY14228.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative isoform 4 [Theobroma cacao]
          Length = 569

 Score =  100 bits (248), Expect = 3e-19
 Identities = 47/83 (56%), Positives = 64/83 (77%)
 Frame = +2

Query: 2   ILDDVAYSMIIYAKLKDNNLESAQELFEEMHKRGFHSNAYLYTLFIGAHCNKGRIDEARR 181
           ILD +AYS +++ KLK  NLE A E+ EEM KRGF +N++L++ FI A+   GRI EA  
Sbjct: 300 ILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIHEAEN 359

Query: 182 LMQEMKNMGLKPYDETYNVLIKG 250
           +++EM+NMGLKPYDET+N LI+G
Sbjct: 360 VLREMENMGLKPYDETFNYLIEG 382


>ref|XP_007022702.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           isoform 3 [Theobroma cacao] gi|508722330|gb|EOY14227.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative isoform 3 [Theobroma cacao]
          Length = 563

 Score =  100 bits (248), Expect = 3e-19
 Identities = 47/83 (56%), Positives = 64/83 (77%)
 Frame = +2

Query: 2   ILDDVAYSMIIYAKLKDNNLESAQELFEEMHKRGFHSNAYLYTLFIGAHCNKGRIDEARR 181
           ILD +AYS +++ KLK  NLE A E+ EEM KRGF +N++L++ FI A+   GRI EA  
Sbjct: 300 ILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIHEAEN 359

Query: 182 LMQEMKNMGLKPYDETYNVLIKG 250
           +++EM+NMGLKPYDET+N LI+G
Sbjct: 360 VLREMENMGLKPYDETFNYLIEG 382


>ref|XP_007022701.1| Pentatricopeptide repeat superfamily protein, putative isoform 2
           [Theobroma cacao] gi|508722329|gb|EOY14226.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 2 [Theobroma cacao]
          Length = 549

 Score =  100 bits (248), Expect = 3e-19
 Identities = 47/83 (56%), Positives = 64/83 (77%)
 Frame = +2

Query: 2   ILDDVAYSMIIYAKLKDNNLESAQELFEEMHKRGFHSNAYLYTLFIGAHCNKGRIDEARR 181
           ILD +AYS +++ KLK  NLE A E+ EEM KRGF +N++L++ FI A+   GRI EA  
Sbjct: 300 ILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIHEAEN 359

Query: 182 LMQEMKNMGLKPYDETYNVLIKG 250
           +++EM+NMGLKPYDET+N LI+G
Sbjct: 360 VLREMENMGLKPYDETFNYLIEG 382


>ref|XP_007022700.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508722328|gb|EOY14225.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 1 [Theobroma cacao]
          Length = 596

 Score =  100 bits (248), Expect = 3e-19
 Identities = 47/83 (56%), Positives = 64/83 (77%)
 Frame = +2

Query: 2   ILDDVAYSMIIYAKLKDNNLESAQELFEEMHKRGFHSNAYLYTLFIGAHCNKGRIDEARR 181
           ILD +AYS +++ KLK  NLE A E+ EEM KRGF +N++L++ FI A+   GRI EA  
Sbjct: 300 ILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIHEAEN 359

Query: 182 LMQEMKNMGLKPYDETYNVLIKG 250
           +++EM+NMGLKPYDET+N LI+G
Sbjct: 360 VLREMENMGLKPYDETFNYLIEG 382


>ref|XP_006302104.1| hypothetical protein CARUB_v10020095mg [Capsella rubella]
           gi|482570814|gb|EOA35002.1| hypothetical protein
           CARUB_v10020095mg [Capsella rubella]
          Length = 548

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 39/83 (46%), Positives = 63/83 (75%)
 Frame = +2

Query: 2   ILDDVAYSMIIYAKLKDNNLESAQELFEEMHKRGFHSNAYLYTLFIGAHCNKGRIDEARR 181
           ++D + YS+++YAK K+ +LESA+ +F+EM +RGF  NA++YT F+ A C +G ++EA R
Sbjct: 298 VVDTIGYSIVVYAKTKEGDLESARNVFDEMLQRGFSGNAFVYTAFVRACCERGEVEEAER 357

Query: 182 LMQEMKNMGLKPYDETYNVLIKG 250
            M EM+  G+ PY++T+N LI+G
Sbjct: 358 WMSEMEESGINPYEDTFNCLIEG 380


>ref|NP_849849.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122215314|sp|Q3ECH5.1|PP107_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g66345, mitochondrial; Flags: Precursor
           gi|332196377|gb|AEE34498.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 544

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 39/83 (46%), Positives = 63/83 (75%)
 Frame = +2

Query: 2   ILDDVAYSMIIYAKLKDNNLESAQELFEEMHKRGFHSNAYLYTLFIGAHCNKGRIDEARR 181
           ++D + YS+++YAK K+ +L SA+++F+EM +RGF +N+++YT+F+   C KG + EA R
Sbjct: 301 VVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAER 360

Query: 182 LMQEMKNMGLKPYDETYNVLIKG 250
           L+ EM+  G+ PYDET+N LI G
Sbjct: 361 LLSEMEESGVSPYDETFNCLIGG 383


>ref|XP_002887023.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297332864|gb|EFH63282.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 539

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 39/83 (46%), Positives = 62/83 (74%)
 Frame = +2

Query: 2   ILDDVAYSMIIYAKLKDNNLESAQELFEEMHKRGFHSNAYLYTLFIGAHCNKGRIDEARR 181
           ++D + YS+++YAK K  +LE A+ +F+EM +RGF +NA++YT F+   C +G ++EA R
Sbjct: 295 VVDVIGYSIVVYAKTKKGDLECARNVFDEMIRRGFSANAFVYTAFVRVCCERGDVEEAER 354

Query: 182 LMQEMKNMGLKPYDETYNVLIKG 250
           LM EM++ G+ PY+ET+N LI G
Sbjct: 355 LMSEMEDSGVNPYEETFNFLIVG 377