BLASTX nr result
ID: Cocculus23_contig00057499
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00057499
(161 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006836393.1| hypothetical protein AMTR_s00092p00136000 [A... 53 3e-10
ref|XP_007022303.1| RecA DNA recombination family protein isofor... 53 7e-10
dbj|BAH56931.1| AT1G79050 [Arabidopsis thaliana] 53 7e-10
ref|XP_006477998.1| PREDICTED: DNA repair protein recA homolog 1... 53 7e-10
ref|XP_006441022.1| hypothetical protein CICLE_v10020181mg [Citr... 53 7e-10
ref|NP_565198.1| DNA repair protein recA-like 1 [Arabidopsis tha... 53 7e-10
gb|AAA32855.1| replicase, partial [Arabidopsis thaliana] 53 7e-10
gb|EEC75811.1| hypothetical protein OsI_12760 [Oryza sativa Indi... 52 7e-10
ref|XP_006301561.1| hypothetical protein CARUB_v10021995mg [Caps... 53 7e-10
gb|ACN27072.1| unknown [Zea mays] gi|414871796|tpg|DAA50353.1| T... 52 7e-10
ref|XP_003562019.1| PREDICTED: DNA repair protein recA homolog 1... 52 7e-10
ref|XP_006370468.1| DNA repair protein recA [Populus trichocarpa... 53 7e-10
ref|XP_007022304.1| RecA DNA recombination family protein isofor... 53 7e-10
ref|XP_006346054.1| PREDICTED: DNA repair protein recA homolog 1... 53 7e-10
ref|XP_004243994.1| PREDICTED: DNA repair protein recA homolog 1... 53 7e-10
ref|XP_004288592.1| PREDICTED: DNA repair protein recA homolog 1... 53 7e-10
ref|NP_001050738.1| Os03g0639700 [Oryza sativa Japonica Group] g... 52 7e-10
ref|XP_004151021.1| PREDICTED: DNA repair protein recA homolog 1... 53 7e-10
ref|XP_004982347.1| PREDICTED: DNA repair protein recA homolog 1... 52 7e-10
ref|XP_007133319.1| hypothetical protein PHAVU_011G169700g [Phas... 53 7e-10
>ref|XP_006836393.1| hypothetical protein AMTR_s00092p00136000 [Amborella trichopoda]
gi|548838911|gb|ERM99246.1| hypothetical protein
AMTR_s00092p00136000 [Amborella trichopoda]
Length = 406
Score = 53.1 bits (126), Expect(2) = 3e-10
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +1
Query: 1 QALRKMSGNASKAGCALIFLNQIRYK 78
QALRKMSGNASKAGC LIFLNQIRYK
Sbjct: 223 QALRKMSGNASKAGCTLIFLNQIRYK 248
Score = 37.0 bits (84), Expect(2) = 3e-10
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +3
Query: 114 FKIGVFYGNPEVTSGG 161
+KIGVFYGNPEVTSGG
Sbjct: 247 YKIGVFYGNPEVTSGG 262
>ref|XP_007022303.1| RecA DNA recombination family protein isoform 1 [Theobroma cacao]
gi|508721931|gb|EOY13828.1| RecA DNA recombination
family protein isoform 1 [Theobroma cacao]
Length = 485
Score = 53.1 bits (126), Expect(2) = 7e-10
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +1
Query: 1 QALRKMSGNASKAGCALIFLNQIRYK 78
QALRKMSGNASKAGC LIFLNQIRYK
Sbjct: 301 QALRKMSGNASKAGCTLIFLNQIRYK 326
Score = 35.8 bits (81), Expect(2) = 7e-10
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +3
Query: 114 FKIGVFYGNPEVTSGG 161
+KIGV+YGNPEVTSGG
Sbjct: 325 YKIGVYYGNPEVTSGG 340
>dbj|BAH56931.1| AT1G79050 [Arabidopsis thaliana]
Length = 448
Score = 53.1 bits (126), Expect(2) = 7e-10
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +1
Query: 1 QALRKMSGNASKAGCALIFLNQIRYK 78
QALRKMSGNASKAGC LIFLNQIRYK
Sbjct: 249 QALRKMSGNASKAGCTLIFLNQIRYK 274
Score = 35.8 bits (81), Expect(2) = 7e-10
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +3
Query: 114 FKIGVFYGNPEVTSGG 161
+KIGV+YGNPEVTSGG
Sbjct: 273 YKIGVYYGNPEVTSGG 288
>ref|XP_006477998.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
[Citrus sinensis]
Length = 440
Score = 53.1 bits (126), Expect(2) = 7e-10
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +1
Query: 1 QALRKMSGNASKAGCALIFLNQIRYK 78
QALRKMSGNASKAGC LIFLNQIRYK
Sbjct: 257 QALRKMSGNASKAGCTLIFLNQIRYK 282
Score = 35.8 bits (81), Expect(2) = 7e-10
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +3
Query: 114 FKIGVFYGNPEVTSGG 161
+KIGV+YGNPEVTSGG
Sbjct: 281 YKIGVYYGNPEVTSGG 296
>ref|XP_006441022.1| hypothetical protein CICLE_v10020181mg [Citrus clementina]
gi|557543284|gb|ESR54262.1| hypothetical protein
CICLE_v10020181mg [Citrus clementina]
Length = 440
Score = 53.1 bits (126), Expect(2) = 7e-10
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +1
Query: 1 QALRKMSGNASKAGCALIFLNQIRYK 78
QALRKMSGNASKAGC LIFLNQIRYK
Sbjct: 257 QALRKMSGNASKAGCTLIFLNQIRYK 282
Score = 35.8 bits (81), Expect(2) = 7e-10
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +3
Query: 114 FKIGVFYGNPEVTSGG 161
+KIGV+YGNPEVTSGG
Sbjct: 281 YKIGVYYGNPEVTSGG 296
>ref|NP_565198.1| DNA repair protein recA-like 1 [Arabidopsis thaliana]
gi|2500098|sp|Q39199.1|RECAC_ARATH RecName: Full=DNA
repair protein recA homolog 1, chloroplastic; AltName:
Full=Recombinase A homolog 1; Flags: Precursor
gi|289208|gb|AAA61781.1| chloroplast DNA repair protein
precursor [Arabidopsis thaliana]
gi|3152570|gb|AAC17051.1| Match to nuclear-encoded
chloroplast DNA repair protein (E. coli recA homolog)
gb|L15229 [Arabidopsis thaliana]
gi|15292903|gb|AAK92822.1| putative replicase
[Arabidopsis thaliana] gi|21281181|gb|AAM45008.1|
putative replicase [Arabidopsis thaliana]
gi|332198076|gb|AEE36197.1| DNA repair protein recA-like
1 [Arabidopsis thaliana]
Length = 439
Score = 53.1 bits (126), Expect(2) = 7e-10
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +1
Query: 1 QALRKMSGNASKAGCALIFLNQIRYK 78
QALRKMSGNASKAGC LIFLNQIRYK
Sbjct: 249 QALRKMSGNASKAGCTLIFLNQIRYK 274
Score = 35.8 bits (81), Expect(2) = 7e-10
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +3
Query: 114 FKIGVFYGNPEVTSGG 161
+KIGV+YGNPEVTSGG
Sbjct: 273 YKIGVYYGNPEVTSGG 288
>gb|AAA32855.1| replicase, partial [Arabidopsis thaliana]
Length = 438
Score = 53.1 bits (126), Expect(2) = 7e-10
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +1
Query: 1 QALRKMSGNASKAGCALIFLNQIRYK 78
QALRKMSGNASKAGC LIFLNQIRYK
Sbjct: 248 QALRKMSGNASKAGCTLIFLNQIRYK 273
Score = 35.8 bits (81), Expect(2) = 7e-10
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +3
Query: 114 FKIGVFYGNPEVTSGG 161
+KIGV+YGNPEVTSGG
Sbjct: 272 YKIGVYYGNPEVTSGG 287
>gb|EEC75811.1| hypothetical protein OsI_12760 [Oryza sativa Indica Group]
gi|222625431|gb|EEE59563.1| hypothetical protein
OsJ_11852 [Oryza sativa Japonica Group]
Length = 436
Score = 52.0 bits (123), Expect(2) = 7e-10
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +1
Query: 1 QALRKMSGNASKAGCALIFLNQIRYK 78
QALRKMSGNASKAGC L+FLNQIRYK
Sbjct: 254 QALRKMSGNASKAGCTLMFLNQIRYK 279
Score = 37.0 bits (84), Expect(2) = 7e-10
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +3
Query: 114 FKIGVFYGNPEVTSGG 161
+KIGVFYGNPEVTSGG
Sbjct: 278 YKIGVFYGNPEVTSGG 293
>ref|XP_006301561.1| hypothetical protein CARUB_v10021995mg [Capsella rubella]
gi|482570271|gb|EOA34459.1| hypothetical protein
CARUB_v10021995mg [Capsella rubella]
Length = 434
Score = 53.1 bits (126), Expect(2) = 7e-10
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +1
Query: 1 QALRKMSGNASKAGCALIFLNQIRYK 78
QALRKMSGNASKAGC LIFLNQIRYK
Sbjct: 245 QALRKMSGNASKAGCTLIFLNQIRYK 270
Score = 35.8 bits (81), Expect(2) = 7e-10
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +3
Query: 114 FKIGVFYGNPEVTSGG 161
+KIGV+YGNPEVTSGG
Sbjct: 269 YKIGVYYGNPEVTSGG 284
>gb|ACN27072.1| unknown [Zea mays] gi|414871796|tpg|DAA50353.1| TPA: putative recA
DNA recombination family protein [Zea mays]
Length = 433
Score = 52.0 bits (123), Expect(2) = 7e-10
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +1
Query: 1 QALRKMSGNASKAGCALIFLNQIRYK 78
QALRKMSGNASKAGC L+FLNQIRYK
Sbjct: 250 QALRKMSGNASKAGCTLMFLNQIRYK 275
Score = 37.0 bits (84), Expect(2) = 7e-10
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +3
Query: 114 FKIGVFYGNPEVTSGG 161
+KIGVFYGNPEVTSGG
Sbjct: 274 YKIGVFYGNPEVTSGG 289
>ref|XP_003562019.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
isoform 2 [Brachypodium distachyon]
Length = 430
Score = 52.0 bits (123), Expect(2) = 7e-10
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +1
Query: 1 QALRKMSGNASKAGCALIFLNQIRYK 78
QALRKMSGNASKAGC L+FLNQIRYK
Sbjct: 247 QALRKMSGNASKAGCTLMFLNQIRYK 272
Score = 37.0 bits (84), Expect(2) = 7e-10
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +3
Query: 114 FKIGVFYGNPEVTSGG 161
+KIGVFYGNPEVTSGG
Sbjct: 271 YKIGVFYGNPEVTSGG 286
>ref|XP_006370468.1| DNA repair protein recA [Populus trichocarpa]
gi|550349661|gb|ERP67037.1| DNA repair protein recA
[Populus trichocarpa]
Length = 427
Score = 53.1 bits (126), Expect(2) = 7e-10
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +1
Query: 1 QALRKMSGNASKAGCALIFLNQIRYK 78
QALRKMSGNASKAGC LIFLNQIRYK
Sbjct: 243 QALRKMSGNASKAGCTLIFLNQIRYK 268
Score = 35.8 bits (81), Expect(2) = 7e-10
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +3
Query: 114 FKIGVFYGNPEVTSGG 161
+KIGV+YGNPEVTSGG
Sbjct: 267 YKIGVYYGNPEVTSGG 282
>ref|XP_007022304.1| RecA DNA recombination family protein isoform 2, partial [Theobroma
cacao] gi|508721932|gb|EOY13829.1| RecA DNA
recombination family protein isoform 2, partial
[Theobroma cacao]
Length = 420
Score = 53.1 bits (126), Expect(2) = 7e-10
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +1
Query: 1 QALRKMSGNASKAGCALIFLNQIRYK 78
QALRKMSGNASKAGC LIFLNQIRYK
Sbjct: 270 QALRKMSGNASKAGCTLIFLNQIRYK 295
Score = 35.8 bits (81), Expect(2) = 7e-10
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +3
Query: 114 FKIGVFYGNPEVTSGG 161
+KIGV+YGNPEVTSGG
Sbjct: 294 YKIGVYYGNPEVTSGG 309
>ref|XP_006346054.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
[Solanum tuberosum]
Length = 419
Score = 53.1 bits (126), Expect(2) = 7e-10
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +1
Query: 1 QALRKMSGNASKAGCALIFLNQIRYK 78
QALRKMSGNASKAGC LIFLNQIRYK
Sbjct: 234 QALRKMSGNASKAGCTLIFLNQIRYK 259
Score = 35.8 bits (81), Expect(2) = 7e-10
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +3
Query: 114 FKIGVFYGNPEVTSGG 161
+KIGV+YGNPEVTSGG
Sbjct: 258 YKIGVYYGNPEVTSGG 273
>ref|XP_004243994.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
[Solanum lycopersicum]
Length = 419
Score = 53.1 bits (126), Expect(2) = 7e-10
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +1
Query: 1 QALRKMSGNASKAGCALIFLNQIRYK 78
QALRKMSGNASKAGC LIFLNQIRYK
Sbjct: 234 QALRKMSGNASKAGCTLIFLNQIRYK 259
Score = 35.8 bits (81), Expect(2) = 7e-10
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +3
Query: 114 FKIGVFYGNPEVTSGG 161
+KIGV+YGNPEVTSGG
Sbjct: 258 YKIGVYYGNPEVTSGG 273
>ref|XP_004288592.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 418
Score = 53.1 bits (126), Expect(2) = 7e-10
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +1
Query: 1 QALRKMSGNASKAGCALIFLNQIRYK 78
QALRKMSGNASKAGC LIFLNQIRYK
Sbjct: 233 QALRKMSGNASKAGCTLIFLNQIRYK 258
Score = 35.8 bits (81), Expect(2) = 7e-10
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +3
Query: 114 FKIGVFYGNPEVTSGG 161
+KIGV+YGNPEVTSGG
Sbjct: 257 YKIGVYYGNPEVTSGG 272
>ref|NP_001050738.1| Os03g0639700 [Oryza sativa Japonica Group]
gi|108710024|gb|ABF97819.1| DNA repair protein recA,
chloroplast precursor, putative, expressed [Oryza sativa
Japonica Group] gi|113549209|dbj|BAF12652.1|
Os03g0639700 [Oryza sativa Japonica Group]
gi|215704578|dbj|BAG94211.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 418
Score = 52.0 bits (123), Expect(2) = 7e-10
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +1
Query: 1 QALRKMSGNASKAGCALIFLNQIRYK 78
QALRKMSGNASKAGC L+FLNQIRYK
Sbjct: 236 QALRKMSGNASKAGCTLMFLNQIRYK 261
Score = 37.0 bits (84), Expect(2) = 7e-10
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +3
Query: 114 FKIGVFYGNPEVTSGG 161
+KIGVFYGNPEVTSGG
Sbjct: 260 YKIGVFYGNPEVTSGG 275
>ref|XP_004151021.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
[Cucumis sativus]
Length = 417
Score = 53.1 bits (126), Expect(2) = 7e-10
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +1
Query: 1 QALRKMSGNASKAGCALIFLNQIRYK 78
QALRKMSGNASKAGC LIFLNQIRYK
Sbjct: 235 QALRKMSGNASKAGCTLIFLNQIRYK 260
Score = 35.8 bits (81), Expect(2) = 7e-10
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +3
Query: 114 FKIGVFYGNPEVTSGG 161
+KIGV+YGNPEVTSGG
Sbjct: 259 YKIGVYYGNPEVTSGG 274
>ref|XP_004982347.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
[Setaria italica]
Length = 417
Score = 52.0 bits (123), Expect(2) = 7e-10
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +1
Query: 1 QALRKMSGNASKAGCALIFLNQIRYK 78
QALRKMSGNASKAGC L+FLNQIRYK
Sbjct: 234 QALRKMSGNASKAGCTLMFLNQIRYK 259
Score = 37.0 bits (84), Expect(2) = 7e-10
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +3
Query: 114 FKIGVFYGNPEVTSGG 161
+KIGVFYGNPEVTSGG
Sbjct: 258 YKIGVFYGNPEVTSGG 273
>ref|XP_007133319.1| hypothetical protein PHAVU_011G169700g [Phaseolus vulgaris]
gi|561006319|gb|ESW05313.1| hypothetical protein
PHAVU_011G169700g [Phaseolus vulgaris]
Length = 415
Score = 53.1 bits (126), Expect(2) = 7e-10
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +1
Query: 1 QALRKMSGNASKAGCALIFLNQIRYK 78
QALRKMSGNASKAGC LIFLNQIRYK
Sbjct: 230 QALRKMSGNASKAGCTLIFLNQIRYK 255
Score = 35.8 bits (81), Expect(2) = 7e-10
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +3
Query: 114 FKIGVFYGNPEVTSGG 161
+KIGV+YGNPEVTSGG
Sbjct: 254 YKIGVYYGNPEVTSGG 269