BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00057437
         (331 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006481630.1| PREDICTED: putative pentatricopeptide repeat...   123   2e-26
ref|XP_007028037.1| Pentatricopeptide repeat (PPR) superfamily p...   120   2e-25
ref|XP_006430030.1| hypothetical protein CICLE_v10010964mg [Citr...   119   3e-25
ref|XP_002524089.1| pentatricopeptide repeat-containing protein,...   118   7e-25
gb|EXC12963.1| hypothetical protein L484_016893 [Morus notabilis]     113   3e-23
ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat...   113   3e-23
ref|XP_004228915.1| PREDICTED: putative pentatricopeptide repeat...   111   9e-23
ref|XP_004303386.1| PREDICTED: putative pentatricopeptide repeat...   110   2e-22
ref|XP_004303385.1| PREDICTED: putative pentatricopeptide repeat...   110   2e-22
ref|XP_006348568.1| PREDICTED: putative pentatricopeptide repeat...   110   3e-22
ref|XP_002308333.2| pentatricopeptide repeat-containing family p...   109   5e-22
ref|XP_002871218.1| pentatricopeptide repeat-containing protein ...   101   1e-19
ref|NP_196258.1| pentatricopeptide repeat-containing protein [Ar...    99   5e-19
ref|XP_006399113.1| hypothetical protein EUTSA_v10012543mg [Eutr...    99   5e-19
gb|EPS63838.1| hypothetical protein M569_10945, partial [Genlise...    96   7e-18
ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat...    94   2e-17
ref|XP_004136721.1| PREDICTED: putative pentatricopeptide repeat...    94   2e-17
ref|XP_006826424.1| hypothetical protein AMTR_s00004p00162290 [A...    91   2e-16
ref|XP_007204493.1| hypothetical protein PRUPE_ppa019635mg [Prun...    89   8e-16
ref|XP_007145770.1| hypothetical protein PHAVU_007G266200g [Phas...    87   2e-15

>ref|XP_006481630.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g06400, mitochondrial-like [Citrus sinensis]
          Length = 1040

 Score =  123 bits (309), Expect = 2e-26
 Identities = 57/80 (71%), Positives = 68/80 (85%)
 Frame = +2

Query: 92  KLGDSVEIDVSPIVHKITEVIRAEDSAVSMEERLENSGFVFDSEIVEKVLKRCFKVGHLA 271
           ++G+   IDVSPIVH+ITE++RA +  VSMEERLEN  F F+ E+V+KVLKRCFKV HLA
Sbjct: 119 RVGNLGGIDVSPIVHEITEIVRAGNDVVSMEERLENLSFRFEPEVVDKVLKRCFKVPHLA 178

Query: 272 LRFFNWIKLRAGFCHTTETY 331
           LRFFNW+KLR GFCHTTETY
Sbjct: 179 LRFFNWVKLREGFCHTTETY 198


>ref|XP_007028037.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao] gi|508716642|gb|EOY08539.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative [Theobroma cacao]
          Length = 1050

 Score =  120 bits (301), Expect = 2e-25
 Identities = 55/80 (68%), Positives = 69/80 (86%)
 Frame = +2

Query: 92  KLGDSVEIDVSPIVHKITEVIRAEDSAVSMEERLENSGFVFDSEIVEKVLKRCFKVGHLA 271
           ++G+SVE DVSP+VHKIT+++RAE++ VSME +LE SGF F+ EIVEKVLKRCFKV HLA
Sbjct: 130 QMGNSVEFDVSPVVHKITKIVRAENALVSMENQLEKSGFSFEPEIVEKVLKRCFKVPHLA 189

Query: 272 LRFFNWIKLRAGFCHTTETY 331
            RFF+W+KLR GF HTT T+
Sbjct: 190 FRFFSWVKLREGFRHTTGTF 209


>ref|XP_006430030.1| hypothetical protein CICLE_v10010964mg [Citrus clementina]
           gi|557532087|gb|ESR43270.1| hypothetical protein
           CICLE_v10010964mg [Citrus clementina]
          Length = 1040

 Score =  119 bits (299), Expect = 3e-25
 Identities = 55/80 (68%), Positives = 66/80 (82%)
 Frame = +2

Query: 92  KLGDSVEIDVSPIVHKITEVIRAEDSAVSMEERLENSGFVFDSEIVEKVLKRCFKVGHLA 271
           ++G+   ID SPIVH+ITE++RA +  VSMEERLEN  F F+ E+V+KVLKRCFKV HLA
Sbjct: 119 RVGNLGGIDFSPIVHEITEIVRAGNDVVSMEERLENLSFRFEPEVVDKVLKRCFKVPHLA 178

Query: 272 LRFFNWIKLRAGFCHTTETY 331
           LRFFNW+KLR GFCH TETY
Sbjct: 179 LRFFNWVKLREGFCHATETY 198


>ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536657|gb|EEF38299.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1072

 Score =  118 bits (296), Expect = 7e-25
 Identities = 54/80 (67%), Positives = 67/80 (83%)
 Frame = +2

Query: 92  KLGDSVEIDVSPIVHKITEVIRAEDSAVSMEERLENSGFVFDSEIVEKVLKRCFKVGHLA 271
           ++ D  EIDVSP+V +IT ++RAE+  V+MEERLEN GF F+ EIVEKVLKRCFKV HLA
Sbjct: 134 QIRDLNEIDVSPVVREITGIVRAENDLVAMEERLENLGFYFEPEIVEKVLKRCFKVPHLA 193

Query: 272 LRFFNWIKLRAGFCHTTETY 331
            RFF+W+K+R GFCHTT+TY
Sbjct: 194 FRFFSWVKMRDGFCHTTKTY 213


>gb|EXC12963.1| hypothetical protein L484_016893 [Morus notabilis]
          Length = 1039

 Score =  113 bits (282), Expect = 3e-23
 Identities = 59/106 (55%), Positives = 71/106 (66%)
 Frame = +2

Query: 14  CRPNVCRMGKESXXXXXXXXXXXXXXKLGDSVEIDVSPIVHKITEVIRAEDSAVSMEERL 193
           C   VCR  +ES              K G ++EIDVSP+VH++  ++RAE  +VSMEERL
Sbjct: 104 CTLTVCRNVEESVLQE----------KDGFAIEIDVSPVVHEVARIVRAEFGSVSMEERL 153

Query: 194 ENSGFVFDSEIVEKVLKRCFKVGHLALRFFNWIKLRAGFCHTTETY 331
           E SGF  DSEIV+KVLKRCFKV HLA+RFFNW+KLR  F  TT  Y
Sbjct: 154 EKSGFELDSEIVDKVLKRCFKVPHLAMRFFNWVKLRDWFDPTTRVY 199


>ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g06400, mitochondrial-like [Vitis vinifera]
          Length = 1048

 Score =  113 bits (282), Expect = 3e-23
 Identities = 52/72 (72%), Positives = 61/72 (84%)
 Frame = +2

Query: 116 DVSPIVHKITEVIRAEDSAVSMEERLENSGFVFDSEIVEKVLKRCFKVGHLALRFFNWIK 295
           DVSP+V +IT+++RA+    SMEE+LE SGFVFDSE+VEKVLKRCFKV HLALRFFNW+K
Sbjct: 137 DVSPMVDEITKIVRADIGTGSMEEKLEKSGFVFDSEVVEKVLKRCFKVPHLALRFFNWVK 196

Query: 296 LRAGFCHTTETY 331
            R G CHTT TY
Sbjct: 197 FRNGGCHTTRTY 208


>ref|XP_004228915.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g06400, mitochondrial-like [Solanum lycopersicum]
          Length = 1092

 Score =  111 bits (278), Expect = 9e-23
 Identities = 50/80 (62%), Positives = 67/80 (83%)
 Frame = +2

Query: 92  KLGDSVEIDVSPIVHKITEVIRAEDSAVSMEERLENSGFVFDSEIVEKVLKRCFKVGHLA 271
           ++ D V+ DVSPIVHKIT ++R+E   ++MEE+LE++GF ++ ++VEKVLKRCFKV HLA
Sbjct: 173 RVEDLVKRDVSPIVHKITGILRSECDVIAMEEQLESAGFEYNEDVVEKVLKRCFKVPHLA 232

Query: 272 LRFFNWIKLRAGFCHTTETY 331
           LRFF+W+K R GF HTTETY
Sbjct: 233 LRFFDWLKTREGFSHTTETY 252


>ref|XP_004303386.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g06400, mitochondrial-like isoform 2 [Fragaria vesca
           subsp. vesca]
          Length = 1037

 Score =  110 bits (276), Expect = 2e-22
 Identities = 49/74 (66%), Positives = 60/74 (81%)
 Frame = +2

Query: 110 EIDVSPIVHKITEVIRAEDSAVSMEERLENSGFVFDSEIVEKVLKRCFKVGHLALRFFNW 289
           E DVSP+VH++T ++RAE   VSMEERL+   F  DSEIV+ VLKRCFKV HLALRFF+W
Sbjct: 129 EADVSPVVHEVTRIVRAESGLVSMEERLDELRFELDSEIVDNVLKRCFKVPHLALRFFDW 188

Query: 290 IKLRAGFCHTTETY 331
           +K+R GFCHTT+ Y
Sbjct: 189 VKMREGFCHTTKIY 202


>ref|XP_004303385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g06400, mitochondrial-like isoform 1 [Fragaria vesca
           subsp. vesca]
          Length = 1038

 Score =  110 bits (276), Expect = 2e-22
 Identities = 49/74 (66%), Positives = 60/74 (81%)
 Frame = +2

Query: 110 EIDVSPIVHKITEVIRAEDSAVSMEERLENSGFVFDSEIVEKVLKRCFKVGHLALRFFNW 289
           E DVSP+VH++T ++RAE   VSMEERL+   F  DSEIV+ VLKRCFKV HLALRFF+W
Sbjct: 129 EADVSPVVHEVTRIVRAESGLVSMEERLDELRFELDSEIVDNVLKRCFKVPHLALRFFDW 188

Query: 290 IKLRAGFCHTTETY 331
           +K+R GFCHTT+ Y
Sbjct: 189 VKMREGFCHTTKIY 202


>ref|XP_006348568.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g06400, mitochondrial-like [Solanum tuberosum]
          Length = 1087

 Score =  110 bits (274), Expect = 3e-22
 Identities = 50/80 (62%), Positives = 66/80 (82%)
 Frame = +2

Query: 92  KLGDSVEIDVSPIVHKITEVIRAEDSAVSMEERLENSGFVFDSEIVEKVLKRCFKVGHLA 271
           ++ D V+ DVS IVHKIT ++R+E   ++MEE+LE++GF ++ E+VEKVLKRCFKV HLA
Sbjct: 168 RIEDLVKRDVSSIVHKITGILRSECDVIAMEEQLESAGFEYNEEVVEKVLKRCFKVPHLA 227

Query: 272 LRFFNWIKLRAGFCHTTETY 331
           LRFF+W+K R GF HTTETY
Sbjct: 228 LRFFDWLKTREGFSHTTETY 247


>ref|XP_002308333.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550336797|gb|EEE91856.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 1048

 Score =  109 bits (272), Expect = 5e-22
 Identities = 50/80 (62%), Positives = 62/80 (77%)
 Frame = +2

Query: 92  KLGDSVEIDVSPIVHKITEVIRAEDSAVSMEERLENSGFVFDSEIVEKVLKRCFKVGHLA 271
           K+G   E DVS +VH+IT ++RAE+   SMEERL+  GF  + EIVEKVLKRC+KV HLA
Sbjct: 128 KVGALNETDVSAVVHEITGIVRAENCTASMEERLDKVGFQLEPEIVEKVLKRCYKVPHLA 187

Query: 272 LRFFNWIKLRAGFCHTTETY 331
            RFFNW+K + GFCHTT+TY
Sbjct: 188 YRFFNWVKTKDGFCHTTKTY 207


>ref|XP_002871218.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297317055|gb|EFH47477.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1029

 Score =  101 bits (251), Expect = 1e-19
 Identities = 46/74 (62%), Positives = 57/74 (77%)
 Frame = +2

Query: 110 EIDVSPIVHKITEVIRAEDSAVSMEERLENSGFVFDSEIVEKVLKRCFKVGHLALRFFNW 289
           ++D SP+VH+IT V+RA+D  VSME+RLE   F F+ EIVE VLKRCFKV HLA+RFFNW
Sbjct: 118 KVDFSPVVHQITSVVRADDEIVSMEDRLEILSFRFEPEIVENVLKRCFKVPHLAMRFFNW 177

Query: 290 IKLRAGFCHTTETY 331
           +KL+ GF H    Y
Sbjct: 178 VKLKDGFSHRVGIY 191


>ref|NP_196258.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171850|sp|Q9FNG8.1|PP366_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At5g06400, mitochondrial; Flags: Precursor
           gi|9758420|dbj|BAB08962.1| unnamed protein product
           [Arabidopsis thaliana] gi|332003627|gb|AED91010.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 1030

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 45/74 (60%), Positives = 55/74 (74%)
 Frame = +2

Query: 110 EIDVSPIVHKITEVIRAEDSAVSMEERLENSGFVFDSEIVEKVLKRCFKVGHLALRFFNW 289
           E+D SP+VH+IT V+R +D  VSME+RLE   F F+ EIVE VLKRCFKV HLA+RFFNW
Sbjct: 119 EVDFSPVVHEITSVVRGDDVLVSMEDRLEKLSFRFEPEIVENVLKRCFKVPHLAMRFFNW 178

Query: 290 IKLRAGFCHTTETY 331
           +K + GF H    Y
Sbjct: 179 VKQKDGFSHRVGIY 192


>ref|XP_006399113.1| hypothetical protein EUTSA_v10012543mg [Eutrema salsugineum]
           gi|557100203|gb|ESQ40566.1| hypothetical protein
           EUTSA_v10012543mg [Eutrema salsugineum]
          Length = 1036

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 48/75 (64%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
 Frame = +2

Query: 110 EIDVSPIVHKITEVIRAEDSAV-SMEERLENSGFVFDSEIVEKVLKRCFKVGHLALRFFN 286
           E DVSP VH+IT V+RA+D  + SMEERLE   F F+ +IVEKVLKRCFKV HLALRFFN
Sbjct: 123 EFDVSPFVHEITSVVRADDDILDSMEERLEELSFRFEPDIVEKVLKRCFKVPHLALRFFN 182

Query: 287 WIKLRAGFCHTTETY 331
           W+K + G+ HT   Y
Sbjct: 183 WVKDKEGYSHTVGVY 197


>gb|EPS63838.1| hypothetical protein M569_10945, partial [Genlisea aurea]
          Length = 913

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 47/78 (60%), Positives = 57/78 (73%), Gaps = 4/78 (5%)
 Frame = +2

Query: 110 EIDVSPIVHKITEVIRAEDS----AVSMEERLENSGFVFDSEIVEKVLKRCFKVGHLALR 277
           E D SP+VHK+T +IR+ +S    A  MEE+L N+ F+++ EIVE VLKRCFKV HLA R
Sbjct: 1   EEDSSPVVHKVTALIRSPNSTAAAAAPMEEQLNNADFIYNEEIVENVLKRCFKVPHLAFR 60

Query: 278 FFNWIKLRAGFCHTTETY 331
           FFNWIK R  F HTT TY
Sbjct: 61  FFNWIKTRNEFRHTTRTY 78


>ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g06400, mitochondrial-like [Glycine max]
          Length = 1034

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 48/110 (43%), Positives = 66/110 (60%)
 Frame = +2

Query: 2   EHLQCRPNVCRMGKESXXXXXXXXXXXXXXKLGDSVEIDVSPIVHKITEVIRAEDSAVSM 181
           + L C   VC    ++              ++G+  E DVS +V +ITE++R E+ + S+
Sbjct: 91  DQLDCTKGVCENAAQNVDILEDA-------QMGNMGEKDVSRVVSEITEIVRVENDSSSV 143

Query: 182 EERLENSGFVFDSEIVEKVLKRCFKVGHLALRFFNWIKLRAGFCHTTETY 331
           EERLEN  +  +SE+   VLKRCFKV  LALR FNW+KL+ GF HTT TY
Sbjct: 144 EERLENLSYGLNSEVFHMVLKRCFKVPQLALRVFNWLKLKDGFSHTTRTY 193


>ref|XP_004136721.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g06400, mitochondrial-like [Cucumis sativus]
           gi|449501176|ref|XP_004161299.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein At5g06400,
           mitochondrial-like [Cucumis sativus]
          Length = 1037

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 54/110 (49%), Positives = 65/110 (59%)
 Frame = +2

Query: 2   EHLQCRPNVCRMGKESXXXXXXXXXXXXXXKLGDSVEIDVSPIVHKITEVIRAEDSAVSM 181
           EHL   P+VC+  ++               +L    E DVS +VH+IT VIR  +  VSM
Sbjct: 97  EHLPGAPDVCKNAEQETEGT----------QLVVLEENDVSSVVHEITAVIRGGNGLVSM 146

Query: 182 EERLENSGFVFDSEIVEKVLKRCFKVGHLALRFFNWIKLRAGFCHTTETY 331
           EERL N   +F SEIVEKVLKRCFK  HLAL FFNW+K R GF  TT  +
Sbjct: 147 EERLGNLDVMFSSEIVEKVLKRCFKFPHLALGFFNWVKSRDGFQCTTNVF 196


>ref|XP_006826424.1| hypothetical protein AMTR_s00004p00162290 [Amborella trichopoda]
           gi|548830738|gb|ERM93661.1| hypothetical protein
           AMTR_s00004p00162290 [Amborella trichopoda]
          Length = 961

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 41/72 (56%), Positives = 52/72 (72%)
 Frame = +2

Query: 116 DVSPIVHKITEVIRAEDSAVSMEERLENSGFVFDSEIVEKVLKRCFKVGHLALRFFNWIK 295
           DVS  VH+ITE+IR E+S  SME  L  +G  FDS+ V+K+LKRCFK    A+RFF W+K
Sbjct: 42  DVSQFVHRITEIIRDENSTFSMEHSLGEAGLTFDSDTVDKILKRCFKARDAAIRFFYWVK 101

Query: 296 LRAGFCHTTETY 331
           L+ GF HT +TY
Sbjct: 102 LQPGFQHTAQTY 113


>ref|XP_007204493.1| hypothetical protein PRUPE_ppa019635mg [Prunus persica]
           gi|462400024|gb|EMJ05692.1| hypothetical protein
           PRUPE_ppa019635mg [Prunus persica]
          Length = 893

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 41/51 (80%), Positives = 44/51 (86%)
 Frame = +2

Query: 179 MEERLENSGFVFDSEIVEKVLKRCFKVGHLALRFFNWIKLRAGFCHTTETY 331
           MEE LEN GF  DSEIV+KVLKRCFKV HLALRFFNW+KL+ GF HTTETY
Sbjct: 1   MEELLENMGFQLDSEIVDKVLKRCFKVPHLALRFFNWVKLKEGFRHTTETY 51


>ref|XP_007145770.1| hypothetical protein PHAVU_007G266200g [Phaseolus vulgaris]
           gi|561018960|gb|ESW17764.1| hypothetical protein
           PHAVU_007G266200g [Phaseolus vulgaris]
          Length = 1069

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 40/79 (50%), Positives = 58/79 (73%)
 Frame = +2

Query: 92  KLGDSVEIDVSPIVHKITEVIRAEDSAVSMEERLENSGFVFDSEIVEKVLKRCFKVGHLA 271
           ++G+  + DV  IV +ITE++R E+ + SMEERLE+  +  +SE+ + VLKRCFKV  LA
Sbjct: 149 QMGNMGKEDVRRIVDEITEIVRGENGSTSMEERLESLSYGLNSEVFDMVLKRCFKVPQLA 208

Query: 272 LRFFNWIKLRAGFCHTTET 328
            R FNW+KL+ G+ HTT+T
Sbjct: 209 FRAFNWLKLKEGYSHTTQT 227