BLASTX nr result
ID: Cocculus23_contig00057311
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00057311
(291 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004488292.1| PREDICTED: pentatricopeptide repeat-containi... 80 4e-13
ref|XP_003595556.1| Pentatricopeptide repeat protein [Medicago t... 77 2e-12
ref|XP_007138504.1| hypothetical protein PHAVU_009G2147001g, par... 77 3e-12
ref|XP_006597934.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
ref|XP_007138498.1| hypothetical protein PHAVU_009G214200g [Phas... 71 1e-10
ref|XP_007138508.1| hypothetical protein PHAVU_009G215000g [Phas... 71 2e-10
gb|EXB25448.1| hypothetical protein L484_005904 [Morus notabilis] 68 2e-09
ref|XP_006468055.1| PREDICTED: pentatricopeptide repeat-containi... 63 4e-08
ref|XP_006449009.1| hypothetical protein CICLE_v10018083mg [Citr... 63 4e-08
ref|NP_189297.1| pentatricopeptide repeat-containing protein [Ar... 60 4e-07
ref|XP_002876985.1| pentatricopeptide repeat-containing protein ... 59 7e-07
ref|XP_006291116.1| hypothetical protein CARUB_v10017228mg [Caps... 57 2e-06
ref|XP_007214136.1| hypothetical protein PRUPE_ppa018240mg [Prun... 57 3e-06
ref|XP_006395538.1| hypothetical protein EUTSA_v10004197mg [Eutr... 56 5e-06
ref|XP_007019372.1| Pentatricopeptide repeat superfamily protein... 56 6e-06
ref|XP_004499782.1| PREDICTED: pentatricopeptide repeat-containi... 56 6e-06
ref|XP_006836331.1| hypothetical protein AMTR_s00092p00078040 [A... 55 8e-06
ref|XP_004237759.1| PREDICTED: pentatricopeptide repeat-containi... 55 8e-06
>ref|XP_004488292.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cicer arietinum]
Length = 714
Score = 79.7 bits (195), Expect = 4e-13
Identities = 38/84 (45%), Positives = 57/84 (67%)
Frame = +1
Query: 40 EVTKRMSIENWTHWNTLIYEAFKNGNAEDCFYLFERMRMRRLEPNSVTIVNLLRASVVLN 219
E+ +R S+ + WN LI+EAF++G + F LF RMR ++PNSVT++NLLR +V LN
Sbjct: 171 ELFERKSVTGLSFWNNLIFEAFESGKIVESFQLFCRMREENIQPNSVTLINLLRGTVELN 230
Query: 220 SLDAGRMVHLLIVLYSLSGHLSAN 291
SL G+ +H L+V+ +L L+ N
Sbjct: 231 SLKMGQALHSLVVVSNLCEELTVN 254
>ref|XP_003595556.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484604|gb|AES65807.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 1040
Score = 77.4 bits (189), Expect = 2e-12
Identities = 37/83 (44%), Positives = 55/83 (66%)
Frame = +1
Query: 43 VTKRMSIENWTHWNTLIYEAFKNGNAEDCFYLFERMRMRRLEPNSVTIVNLLRASVVLNS 222
+ +R S+ WN LIYEA+++G + F LF RMR ++PNSVT++NLLRA+V NS
Sbjct: 173 LVERKSVTKLNFWNNLIYEAYESGKIVESFELFCRMRNENVQPNSVTLINLLRATVESNS 232
Query: 223 LDAGRMVHLLIVLYSLSGHLSAN 291
L G+++H L+V +L L+ N
Sbjct: 233 LKIGKVLHSLVVASNLCKELTVN 255
>ref|XP_007138504.1| hypothetical protein PHAVU_009G2147001g, partial [Phaseolus
vulgaris] gi|561011591|gb|ESW10498.1| hypothetical
protein PHAVU_009G2147001g, partial [Phaseolus vulgaris]
Length = 294
Score = 76.6 bits (187), Expect = 3e-12
Identities = 35/72 (48%), Positives = 50/72 (69%)
Frame = +1
Query: 76 HWNTLIYEAFKNGNAEDCFYLFERMRMRRLEPNSVTIVNLLRASVVLNSLDAGRMVHLLI 255
+WN LI EAF+NG E+ F LF RMR ++PNS+T++ LLR++V LNSL G+ +H +
Sbjct: 147 YWNNLISEAFENGKMEESFKLFCRMRKENIQPNSITVIGLLRSTVELNSLKTGQALHSFV 206
Query: 256 VLYSLSGHLSAN 291
V+ L G L+ N
Sbjct: 207 VVSCLYGKLTVN 218
>ref|XP_006597934.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 734
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/78 (43%), Positives = 52/78 (66%)
Frame = +1
Query: 58 SIENWTHWNTLIYEAFKNGNAEDCFYLFERMRMRRLEPNSVTIVNLLRASVVLNSLDAGR 237
S+ ++WN LI+EA ++G + F LF RMR +PNSVT++NLLR++ LNSL G+
Sbjct: 187 SVMELSYWNNLIFEACESGKMVESFQLFCRMRKENGQPNSVTVINLLRSTAELNSLKIGQ 246
Query: 238 MVHLLIVLYSLSGHLSAN 291
+H ++VL +L L+ N
Sbjct: 247 ALHAVVVLSNLCEELTVN 264
>ref|XP_007138498.1| hypothetical protein PHAVU_009G214200g [Phaseolus vulgaris]
gi|561011585|gb|ESW10492.1| hypothetical protein
PHAVU_009G214200g [Phaseolus vulgaris]
Length = 732
Score = 71.2 bits (173), Expect = 1e-10
Identities = 33/72 (45%), Positives = 48/72 (66%)
Frame = +1
Query: 76 HWNTLIYEAFKNGNAEDCFYLFERMRMRRLEPNSVTIVNLLRASVVLNSLDAGRMVHLLI 255
+WNTLI +A +NG E+ F LF RMR ++PNS+T++ LLR+ V LN L G+ +H +
Sbjct: 187 YWNTLISKASENGKMEESFKLFCRMRKENIQPNSITVIGLLRSVVELNLLKTGQALHSFV 246
Query: 256 VLYSLSGHLSAN 291
V+ L G L+ N
Sbjct: 247 VVSCLCGELTVN 258
>ref|XP_007138508.1| hypothetical protein PHAVU_009G215000g [Phaseolus vulgaris]
gi|561011595|gb|ESW10502.1| hypothetical protein
PHAVU_009G215000g [Phaseolus vulgaris]
Length = 730
Score = 70.9 bits (172), Expect = 2e-10
Identities = 33/72 (45%), Positives = 48/72 (66%)
Frame = +1
Query: 76 HWNTLIYEAFKNGNAEDCFYLFERMRMRRLEPNSVTIVNLLRASVVLNSLDAGRMVHLLI 255
+WN LI EA +NG E+ F F RMR ++PNS+T++ LLR++V LNSL G+ +H +
Sbjct: 184 YWNNLISEASENGKMEESFKHFCRMRKENIQPNSITVIGLLRSTVELNSLKTGQALHSFV 243
Query: 256 VLYSLSGHLSAN 291
V+ L G L+ N
Sbjct: 244 VVSCLYGKLTVN 255
>gb|EXB25448.1| hypothetical protein L484_005904 [Morus notabilis]
Length = 713
Score = 67.8 bits (164), Expect = 2e-09
Identities = 32/72 (44%), Positives = 51/72 (70%)
Frame = +1
Query: 76 HWNTLIYEAFKNGNAEDCFYLFERMRMRRLEPNSVTIVNLLRASVVLNSLDAGRMVHLLI 255
+WN I +A ++GN + F LF+RMR+ +E NSVT+++LLR+SV LN L G++VH L+
Sbjct: 187 YWNFFIVKAAQSGNGVESFRLFKRMRLESVELNSVTLLSLLRSSVDLNLLSVGKIVHCLV 246
Query: 256 VLYSLSGHLSAN 291
++ +L L+ N
Sbjct: 247 LVSNLGKDLAVN 258
>ref|XP_006468055.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Citrus sinensis]
Length = 727
Score = 63.2 bits (152), Expect = 4e-08
Identities = 33/73 (45%), Positives = 47/73 (64%)
Frame = +1
Query: 73 THWNTLIYEAFKNGNAEDCFYLFERMRMRRLEPNSVTIVNLLRASVVLNSLDAGRMVHLL 252
+ WN+LI A +NG +E F LF+ MRM E +S T++NLLR++V L SL+ GR+VH +
Sbjct: 199 SRWNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCV 258
Query: 253 IVLYSLSGHLSAN 291
V+ LS N
Sbjct: 259 AVVSDFCKDLSVN 271
>ref|XP_006449009.1| hypothetical protein CICLE_v10018083mg [Citrus clementina]
gi|557551620|gb|ESR62249.1| hypothetical protein
CICLE_v10018083mg [Citrus clementina]
Length = 727
Score = 63.2 bits (152), Expect = 4e-08
Identities = 33/73 (45%), Positives = 47/73 (64%)
Frame = +1
Query: 73 THWNTLIYEAFKNGNAEDCFYLFERMRMRRLEPNSVTIVNLLRASVVLNSLDAGRMVHLL 252
+ WN+LI A +NG +E F LF+ MRM E +S T++NLLR++V L SL+ GR+VH +
Sbjct: 199 SRWNSLISLAVQNGKSEKSFELFKLMRMEGAEFDSGTLINLLRSTVELKSLELGRIVHCV 258
Query: 253 IVLYSLSGHLSAN 291
V+ LS N
Sbjct: 259 AVVSDFCKDLSVN 271
>ref|NP_189297.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75275188|sp|Q38959.1|PP257_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g26630, chloroplastic; Flags: Precursor
gi|1402883|emb|CAA66814.1| hypothetical protein
[Arabidopsis thaliana] gi|1495263|emb|CAA66119.1| orf09
[Arabidopsis thaliana] gi|11994298|dbj|BAB01728.1|
unnamed protein product [Arabidopsis thaliana]
gi|20466384|gb|AAM20509.1| unknown protein [Arabidopsis
thaliana] gi|23198064|gb|AAN15559.1| unknown protein
[Arabidopsis thaliana] gi|332643668|gb|AEE77189.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 455
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/71 (43%), Positives = 41/71 (57%)
Frame = +1
Query: 34 AEEVTKRMSIENWTHWNTLIYEAFKNGNAEDCFYLFERMRMRRLEPNSVTIVNLLRASVV 213
AE V +M + N W +I KN ++ F LF RM++ ++PN TIVNLL+AS
Sbjct: 204 AEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQ 263
Query: 214 LNSLDAGRMVH 246
L SL GR VH
Sbjct: 264 LGSLSMGRWVH 274
>ref|XP_002876985.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297322823|gb|EFH53244.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 451
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/71 (43%), Positives = 40/71 (56%)
Frame = +1
Query: 34 AEEVTKRMSIENWTHWNTLIYEAFKNGNAEDCFYLFERMRMRRLEPNSVTIVNLLRASVV 213
AE V +M N W +I KN ++ F LF RM++ ++PN TIVNLL+AS
Sbjct: 203 AEIVFNQMPTRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQ 262
Query: 214 LNSLDAGRMVH 246
L SL GR VH
Sbjct: 263 LGSLSMGRWVH 273
>ref|XP_006291116.1| hypothetical protein CARUB_v10017228mg [Capsella rubella]
gi|482559823|gb|EOA24014.1| hypothetical protein
CARUB_v10017228mg [Capsella rubella]
Length = 454
Score = 57.4 bits (137), Expect = 2e-06
Identities = 30/71 (42%), Positives = 40/71 (56%)
Frame = +1
Query: 34 AEEVTKRMSIENWTHWNTLIYEAFKNGNAEDCFYLFERMRMRRLEPNSVTIVNLLRASVV 213
A+ V +M N W +I KN ++ F LF RM++ ++PN TIVNLL+AS
Sbjct: 203 AKIVFNQMPTRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQ 262
Query: 214 LNSLDAGRMVH 246
L SL GR VH
Sbjct: 263 LGSLSMGRWVH 273
>ref|XP_007214136.1| hypothetical protein PRUPE_ppa018240mg [Prunus persica]
gi|462410001|gb|EMJ15335.1| hypothetical protein
PRUPE_ppa018240mg [Prunus persica]
Length = 696
Score = 57.0 bits (136), Expect = 3e-06
Identities = 31/71 (43%), Positives = 43/71 (60%)
Frame = +1
Query: 79 WNTLIYEAFKNGNAEDCFYLFERMRMRRLEPNSVTIVNLLRASVVLNSLDAGRMVHLLIV 258
WN+L E ++G A M + EP+SVT++NLLR+SV LNSL G+ VH L+V
Sbjct: 186 WNSLTSEGSQSGKA-----------MEKFEPDSVTVINLLRSSVDLNSLQVGKAVHCLVV 234
Query: 259 LYSLSGHLSAN 291
+ +L LS N
Sbjct: 235 VSNLCVDLSVN 245
>ref|XP_006395538.1| hypothetical protein EUTSA_v10004197mg [Eutrema salsugineum]
gi|557092177|gb|ESQ32824.1| hypothetical protein
EUTSA_v10004197mg [Eutrema salsugineum]
Length = 453
Score = 56.2 bits (134), Expect = 5e-06
Identities = 28/71 (39%), Positives = 40/71 (56%)
Frame = +1
Query: 34 AEEVTKRMSIENWTHWNTLIYEAFKNGNAEDCFYLFERMRMRRLEPNSVTIVNLLRASVV 213
AE + +M N W +I KN ++ F LF RM++ ++PN TIV++L+AS
Sbjct: 203 AEIIFNQMPTRNVVSWTAMITAYVKNCRPDEAFQLFRRMQVDEVKPNEFTIVSMLQASTQ 262
Query: 214 LNSLDAGRMVH 246
L SL GR VH
Sbjct: 263 LGSLSMGRWVH 273
>ref|XP_007019372.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
gi|508724700|gb|EOY16597.1| Pentatricopeptide repeat
superfamily protein [Theobroma cacao]
Length = 578
Score = 55.8 bits (133), Expect = 6e-06
Identities = 28/80 (35%), Positives = 42/80 (52%)
Frame = +1
Query: 16 RGLCVVAEEVTKRMSIENWTHWNTLIYEAFKNGNAEDCFYLFERMRMRRLEPNSVTIVNL 195
RG A + R+ + N +WN+LI +NG E +F +M+ EP+ VTI ++
Sbjct: 246 RGDVKEARNIFDRIPVRNLVNWNSLISGYAQNGFCEKALEMFRKMQSEGFEPDEVTITSI 305
Query: 196 LRASVVLNSLDAGRMVHLLI 255
L A L LD G+ +H LI
Sbjct: 306 LSACAQLGELDVGKEIHYLI 325
>ref|XP_004499782.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cicer arietinum]
Length = 814
Score = 55.8 bits (133), Expect = 6e-06
Identities = 30/81 (37%), Positives = 46/81 (56%)
Frame = +1
Query: 43 VTKRMSIENWTHWNTLIYEAFKNGNAEDCFYLFERMRMRRLEPNSVTIVNLLRASVVLNS 222
V +RMS +N WNT+I +NG +E+ F F +M ++EP +VT++ L A L
Sbjct: 297 VFRRMSSKNVVSWNTVIDGLAQNGESEEAFATFLKMLDEKVEPTNVTMMGALHACSNLGD 356
Query: 223 LDAGRMVHLLIVLYSLSGHLS 285
L+ GR VH L+ L ++S
Sbjct: 357 LERGRFVHRLLDERKLDSNVS 377
>ref|XP_006836331.1| hypothetical protein AMTR_s00092p00078040 [Amborella trichopoda]
gi|548838849|gb|ERM99184.1| hypothetical protein
AMTR_s00092p00078040 [Amborella trichopoda]
Length = 716
Score = 55.5 bits (132), Expect = 8e-06
Identities = 31/89 (34%), Positives = 45/89 (50%)
Frame = +1
Query: 19 GLCVVAEEVTKRMSIENWTHWNTLIYEAFKNGNAEDCFYLFERMRMRRLEPNSVTIVNLL 198
G V+A + + N WNT+I G+A F LF MR + + P+ VT+ +L
Sbjct: 174 GKLVIARNLFDEIPERNLISWNTMIEGCNLCGDANGAFSLFREMREKGISPDYVTMTCML 233
Query: 199 RASVVLNSLDAGRMVHLLIVLYSLSGHLS 285
RA + L L G +H +IVL L G L+
Sbjct: 234 RACIKLGCLQLGLALHCVIVLNDLEGELT 262
>ref|XP_004237759.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g21470-like [Solanum lycopersicum]
Length = 528
Score = 55.5 bits (132), Expect = 8e-06
Identities = 28/75 (37%), Positives = 44/75 (58%)
Frame = +1
Query: 34 AEEVTKRMSIENWTHWNTLIYEAFKNGNAEDCFYLFERMRMRRLEPNSVTIVNLLRASVV 213
AE + RM + N +WN+LI +NG E+ F +M+ LEP+ VT+V++L A
Sbjct: 220 AEAIFDRMKMRNLVNWNSLICGYTQNGLCEEALEAFTKMQDEGLEPDEVTVVSVLSACSQ 279
Query: 214 LNSLDAGRMVHLLIV 258
L LD G+ +H +I+
Sbjct: 280 LALLDIGKDIHEMII 294