BLASTX nr result

ID: Cocculus23_contig00057229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00057229
         (200 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK32318.1| NBS resistance protein, partial [Phyllostachys ni...    56   5e-06

>gb|AFK32318.1| NBS resistance protein, partial [Phyllostachys nigra]
          Length = 232

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
 Frame = +3

Query: 12  LMCAGTGSKVLVTTRSDLDASIVD-APPTYKYDLGMLSEDDCWVVFERPAFQTG 170
           L     GSKV+VTTRS+  A ++   PP   Y+LG+LS+DDCW++FE+ AF  G
Sbjct: 95  LKVGAKGSKVIVTTRSEKVARLMGPGPPGISYELGVLSDDDCWILFEQRAFLHG 148


Top