BLASTX nr result
ID: Cocculus23_contig00057177
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00057177
(220 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007048080.1| Pentatricopeptide (PPR) repeat-containing pr... 103 2e-20
ref|XP_002310592.2| pentatricopeptide repeat-containing family p... 101 9e-20
ref|XP_004306202.1| PREDICTED: pentatricopeptide repeat-containi... 98 1e-18
ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containi... 98 1e-18
emb|CBI21484.3| unnamed protein product [Vitis vinifera] 98 1e-18
ref|XP_006354721.1| PREDICTED: pentatricopeptide repeat-containi... 97 2e-18
ref|XP_004237612.1| PREDICTED: pentatricopeptide repeat-containi... 97 2e-18
ref|XP_002878586.1| pentatricopeptide repeat-containing protein ... 97 2e-18
ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containi... 96 4e-18
ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containi... 96 4e-18
ref|XP_004496732.1| PREDICTED: pentatricopeptide repeat-containi... 95 9e-18
ref|XP_006296049.1| hypothetical protein CARUB_v10025197mg [Caps... 95 9e-18
ref|NP_179798.1| pentatricopeptide repeat-containing protein [Ar... 95 9e-18
ref|XP_007143255.1| hypothetical protein PHAVU_007G057100g [Phas... 94 2e-17
gb|EYU31065.1| hypothetical protein MIMGU_mgv1a025575mg [Mimulus... 92 7e-17
gb|EXB80846.1| hypothetical protein L484_020104 [Morus notabilis] 91 1e-16
ref|XP_006404655.1| hypothetical protein EUTSA_v10000053mg [Eutr... 91 2e-16
ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
ref|XP_006651864.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
ref|XP_006428089.1| hypothetical protein CICLE_v10027512mg [Citr... 90 3e-16
>ref|XP_007048080.1| Pentatricopeptide (PPR) repeat-containing protein [Theobroma cacao]
gi|508700341|gb|EOX92237.1| Pentatricopeptide (PPR)
repeat-containing protein [Theobroma cacao]
Length = 782
Score = 103 bits (257), Expect = 2e-20
Identities = 48/72 (66%), Positives = 55/72 (76%)
Frame = -1
Query: 220 IEKMPIEPDIIAWGSLLASCKVYKHXXXXXXXXXXXXXXEPDNSGAYSALANVYSACGRW 41
IEKMPIEPD+I WGSLL+SCKVYK+ +PDNSGAYSALAN+YS CG+W
Sbjct: 570 IEKMPIEPDVITWGSLLSSCKVYKNVDLGKVAAERLLCIDPDNSGAYSALANLYSVCGKW 629
Query: 40 DDAAKARKLMKD 5
+DAAK RKLMKD
Sbjct: 630 EDAAKIRKLMKD 641
>ref|XP_002310592.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550334248|gb|EEE91042.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 785
Score = 101 bits (252), Expect = 9e-20
Identities = 48/73 (65%), Positives = 56/73 (76%)
Frame = -1
Query: 220 IEKMPIEPDIIAWGSLLASCKVYKHXXXXXXXXXXXXXXEPDNSGAYSALANVYSACGRW 41
+E MP+EPD+IAWGSLL+SCKVYK+ EP+NSGAYSALANVYS+CG+W
Sbjct: 573 VENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKW 632
Query: 40 DDAAKARKLMKDR 2
DDAAK RKLMK R
Sbjct: 633 DDAAKIRKLMKAR 645
>ref|XP_004306202.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22070-like
[Fragaria vesca subsp. vesca]
Length = 1013
Score = 98.2 bits (243), Expect = 1e-18
Identities = 47/73 (64%), Positives = 56/73 (76%)
Frame = -1
Query: 220 IEKMPIEPDIIAWGSLLASCKVYKHXXXXXXXXXXXXXXEPDNSGAYSALANVYSACGRW 41
I+ MPIEPDIIAWGSLL++CK++K+ EPDNSGAYSALAN+YSACGRW
Sbjct: 801 IQNMPIEPDIIAWGSLLSACKLHKNVYLAKVAAEKLLLIEPDNSGAYSALANLYSACGRW 860
Query: 40 DDAAKARKLMKDR 2
DAA+ RKLMK+R
Sbjct: 861 ADAAEVRKLMKNR 873
>ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 97.8 bits (242), Expect = 1e-18
Identities = 47/73 (64%), Positives = 55/73 (75%)
Frame = -1
Query: 220 IEKMPIEPDIIAWGSLLASCKVYKHXXXXXXXXXXXXXXEPDNSGAYSALANVYSACGRW 41
IE MPIEPD+IAWGSLLASCKV+K+ EP+NSGAYSALANVYSACG+W
Sbjct: 573 IENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACGQW 632
Query: 40 DDAAKARKLMKDR 2
++AA RK MKD+
Sbjct: 633 ENAANIRKSMKDK 645
>emb|CBI21484.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 97.8 bits (242), Expect = 1e-18
Identities = 47/73 (64%), Positives = 55/73 (75%)
Frame = -1
Query: 220 IEKMPIEPDIIAWGSLLASCKVYKHXXXXXXXXXXXXXXEPDNSGAYSALANVYSACGRW 41
IE MPIEPD+IAWGSLLASCKV+K+ EP+NSGAYSALANVYSACG+W
Sbjct: 378 IENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACGQW 437
Query: 40 DDAAKARKLMKDR 2
++AA RK MKD+
Sbjct: 438 ENAANIRKSMKDK 450
>ref|XP_006354721.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Solanum tuberosum]
Length = 786
Score = 97.1 bits (240), Expect = 2e-18
Identities = 46/73 (63%), Positives = 54/73 (73%)
Frame = -1
Query: 220 IEKMPIEPDIIAWGSLLASCKVYKHXXXXXXXXXXXXXXEPDNSGAYSALANVYSACGRW 41
IE MPIEPD+IAWGSLLASC+V+K +P+NSGAYSALANVYSACG+W
Sbjct: 574 IENMPIEPDVIAWGSLLASCRVHKKMELAKVAADRLLSIDPENSGAYSALANVYSACGKW 633
Query: 40 DDAAKARKLMKDR 2
+AAK RK MKD+
Sbjct: 634 AEAAKIRKSMKDK 646
>ref|XP_004237612.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Solanum lycopersicum]
Length = 786
Score = 97.1 bits (240), Expect = 2e-18
Identities = 46/73 (63%), Positives = 54/73 (73%)
Frame = -1
Query: 220 IEKMPIEPDIIAWGSLLASCKVYKHXXXXXXXXXXXXXXEPDNSGAYSALANVYSACGRW 41
IE MPIEPD+IAWGSLLASC+V+K +P+NSGAYSALANVYSACG+W
Sbjct: 574 IENMPIEPDVIAWGSLLASCRVHKKMELAKVAADRLLSIDPENSGAYSALANVYSACGKW 633
Query: 40 DDAAKARKLMKDR 2
+AAK RK MKD+
Sbjct: 634 AEAAKIRKSMKDK 646
>ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297324425|gb|EFH54845.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 786
Score = 97.1 bits (240), Expect = 2e-18
Identities = 44/72 (61%), Positives = 55/72 (76%)
Frame = -1
Query: 220 IEKMPIEPDIIAWGSLLASCKVYKHXXXXXXXXXXXXXXEPDNSGAYSALANVYSACGRW 41
IEKMPIEPD++ WGSLL++C+VYK+ EP+NSGAYSALAN+YSACG+W
Sbjct: 574 IEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKW 633
Query: 40 DDAAKARKLMKD 5
++AAK RK MKD
Sbjct: 634 EEAAKIRKSMKD 645
>ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 96.3 bits (238), Expect = 4e-18
Identities = 46/73 (63%), Positives = 54/73 (73%)
Frame = -1
Query: 220 IEKMPIEPDIIAWGSLLASCKVYKHXXXXXXXXXXXXXXEPDNSGAYSALANVYSACGRW 41
IE MPIEPD IAWGSLLASCK++K+ +P NSGAY ALANVYSACG+W
Sbjct: 570 IESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKW 629
Query: 40 DDAAKARKLMKDR 2
++AA+ RKLMKDR
Sbjct: 630 ENAAQTRKLMKDR 642
>ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 96.3 bits (238), Expect = 4e-18
Identities = 46/73 (63%), Positives = 54/73 (73%)
Frame = -1
Query: 220 IEKMPIEPDIIAWGSLLASCKVYKHXXXXXXXXXXXXXXEPDNSGAYSALANVYSACGRW 41
IE MPIEPD IAWGSLLASCK++K+ +P NSGAY ALANVYSACG+W
Sbjct: 570 IESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKW 629
Query: 40 DDAAKARKLMKDR 2
++AA+ RKLMKDR
Sbjct: 630 ENAAQTRKLMKDR 642
>ref|XP_004496732.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cicer arietinum]
Length = 782
Score = 95.1 bits (235), Expect = 9e-18
Identities = 45/73 (61%), Positives = 53/73 (72%)
Frame = -1
Query: 220 IEKMPIEPDIIAWGSLLASCKVYKHXXXXXXXXXXXXXXEPDNSGAYSALANVYSACGRW 41
I MPIEPD+IAWGSLL+SC+V+K+ +P+NSGAYSALAN SACG+W
Sbjct: 570 IRSMPIEPDVIAWGSLLSSCRVHKNVDLAKVAAEKLFLIDPNNSGAYSALANTLSACGKW 629
Query: 40 DDAAKARKLMKDR 2
DAAK RKLMKDR
Sbjct: 630 ADAAKVRKLMKDR 642
>ref|XP_006296049.1| hypothetical protein CARUB_v10025197mg [Capsella rubella]
gi|482564757|gb|EOA28947.1| hypothetical protein
CARUB_v10025197mg [Capsella rubella]
Length = 795
Score = 95.1 bits (235), Expect = 9e-18
Identities = 43/72 (59%), Positives = 55/72 (76%)
Frame = -1
Query: 220 IEKMPIEPDIIAWGSLLASCKVYKHXXXXXXXXXXXXXXEPDNSGAYSALANVYSACGRW 41
IEKMPIEPD++ WGSLL++C+V+K+ EP+NSGAYSALAN+YSACG+W
Sbjct: 583 IEKMPIEPDVVTWGSLLSACRVHKNVDLGKVAAERLLLIEPENSGAYSALANLYSACGKW 642
Query: 40 DDAAKARKLMKD 5
++AAK RK MKD
Sbjct: 643 EEAAKIRKSMKD 654
>ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g22070 gi|4587589|gb|AAD25817.1| hypothetical protein
[Arabidopsis thaliana] gi|330252165|gb|AEC07259.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 786
Score = 95.1 bits (235), Expect = 9e-18
Identities = 43/72 (59%), Positives = 55/72 (76%)
Frame = -1
Query: 220 IEKMPIEPDIIAWGSLLASCKVYKHXXXXXXXXXXXXXXEPDNSGAYSALANVYSACGRW 41
IEKMPIEPD++ WGSLL++C+V+K+ EP+NSGAYSALAN+YSACG+W
Sbjct: 574 IEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKW 633
Query: 40 DDAAKARKLMKD 5
++AAK RK MKD
Sbjct: 634 EEAAKIRKSMKD 645
>ref|XP_007143255.1| hypothetical protein PHAVU_007G057100g [Phaseolus vulgaris]
gi|561016445|gb|ESW15249.1| hypothetical protein
PHAVU_007G057100g [Phaseolus vulgaris]
Length = 786
Score = 94.0 bits (232), Expect = 2e-17
Identities = 43/73 (58%), Positives = 54/73 (73%)
Frame = -1
Query: 220 IEKMPIEPDIIAWGSLLASCKVYKHXXXXXXXXXXXXXXEPDNSGAYSALANVYSACGRW 41
I+ MPIEPD++AWGSLL+SC+V+K+ +P+NSGAYSALAN SACG+W
Sbjct: 574 IKTMPIEPDVVAWGSLLSSCRVHKNVDLAIVAAKKLLFIDPNNSGAYSALANTLSACGKW 633
Query: 40 DDAAKARKLMKDR 2
+DAAK RK MKDR
Sbjct: 634 EDAAKVRKSMKDR 646
>gb|EYU31065.1| hypothetical protein MIMGU_mgv1a025575mg [Mimulus guttatus]
Length = 783
Score = 92.0 bits (227), Expect = 7e-17
Identities = 45/73 (61%), Positives = 53/73 (72%)
Frame = -1
Query: 220 IEKMPIEPDIIAWGSLLASCKVYKHXXXXXXXXXXXXXXEPDNSGAYSALANVYSACGRW 41
I+ M IEPD+IAWGSLLASC+ +K+ EPDNSGAYSALANVYSA G+W
Sbjct: 571 IKNMKIEPDVIAWGSLLASCRAHKNVDLAMVAAENMLSLEPDNSGAYSALANVYSASGKW 630
Query: 40 DDAAKARKLMKDR 2
++AAK RK MKDR
Sbjct: 631 EEAAKIRKSMKDR 643
>gb|EXB80846.1| hypothetical protein L484_020104 [Morus notabilis]
Length = 799
Score = 91.3 bits (225), Expect = 1e-16
Identities = 41/73 (56%), Positives = 53/73 (72%)
Frame = -1
Query: 220 IEKMPIEPDIIAWGSLLASCKVYKHXXXXXXXXXXXXXXEPDNSGAYSALANVYSACGRW 41
I+ MPIEPD++ WGSLL++C+V+K+ EP+NSGAY ALAN YSACG+W
Sbjct: 573 IKSMPIEPDVVGWGSLLSACRVHKNVDLAKVAAERLLAIEPENSGAYLALANAYSACGKW 632
Query: 40 DDAAKARKLMKDR 2
+DAA+ RK MKDR
Sbjct: 633 EDAARIRKSMKDR 645
>ref|XP_006404655.1| hypothetical protein EUTSA_v10000053mg [Eutrema salsugineum]
gi|557105783|gb|ESQ46108.1| hypothetical protein
EUTSA_v10000053mg [Eutrema salsugineum]
Length = 785
Score = 90.9 bits (224), Expect = 2e-16
Identities = 41/71 (57%), Positives = 52/71 (73%)
Frame = -1
Query: 217 EKMPIEPDIIAWGSLLASCKVYKHXXXXXXXXXXXXXXEPDNSGAYSALANVYSACGRWD 38
E MPIEPD++ WGSLL++C+V+K+ EP+NSGAYSALAN+YSACG+W
Sbjct: 574 ENMPIEPDVVTWGSLLSACRVHKNVELGKIAAEKLLLIEPENSGAYSALANLYSACGKWG 633
Query: 37 DAAKARKLMKD 5
+AAK RK MKD
Sbjct: 634 EAAKVRKSMKD 644
>ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like isoform X1 [Glycine max]
gi|571439750|ref|XP_006574948.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g22070-like isoform X2 [Glycine max]
Length = 785
Score = 90.9 bits (224), Expect = 2e-16
Identities = 41/73 (56%), Positives = 52/73 (71%)
Frame = -1
Query: 220 IEKMPIEPDIIAWGSLLASCKVYKHXXXXXXXXXXXXXXEPDNSGAYSALANVYSACGRW 41
I MPIEPD++AWGSLL+SC+V+K+ +P+NSGAY ALAN SACG+W
Sbjct: 573 IRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKW 632
Query: 40 DDAAKARKLMKDR 2
+DAAK RK MKD+
Sbjct: 633 EDAAKVRKSMKDK 645
>ref|XP_006651864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like, partial [Oryza brachyantha]
Length = 761
Score = 90.5 bits (223), Expect = 2e-16
Identities = 41/73 (56%), Positives = 53/73 (72%)
Frame = -1
Query: 220 IEKMPIEPDIIAWGSLLASCKVYKHXXXXXXXXXXXXXXEPDNSGAYSALANVYSACGRW 41
I +MP++PD IAWGSLL++C+V+K+ +P+NSGAYSA+ANVYSACGRW
Sbjct: 549 IRQMPVQPDAIAWGSLLSACRVHKNAELAELAAVRLLSIDPNNSGAYSAIANVYSACGRW 608
Query: 40 DDAAKARKLMKDR 2
DAA+ KL KDR
Sbjct: 609 SDAARVWKLRKDR 621
>ref|XP_006428089.1| hypothetical protein CICLE_v10027512mg [Citrus clementina]
gi|568819548|ref|XP_006464311.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g22070-like [Citrus sinensis]
gi|557530079|gb|ESR41329.1| hypothetical protein
CICLE_v10027512mg [Citrus clementina]
Length = 785
Score = 90.1 bits (222), Expect = 3e-16
Identities = 40/71 (56%), Positives = 52/71 (73%)
Frame = -1
Query: 220 IEKMPIEPDIIAWGSLLASCKVYKHXXXXXXXXXXXXXXEPDNSGAYSALANVYSACGRW 41
IE MP+EPD++AWGSLL++C+V+K+ EPDNSGAYSAL N+YS+CG+W
Sbjct: 573 IENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKW 632
Query: 40 DDAAKARKLMK 8
+DAA RK MK
Sbjct: 633 EDAANIRKSMK 643