BLASTX nr result

ID: Cocculus23_contig00057136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00057136
         (357 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communi...    61   2e-07
emb|CBI29756.3| unnamed protein product [Vitis vinifera]               60   3e-07
ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like...    60   3e-07
ref|XP_006471018.1| PREDICTED: ATP-dependent DNA helicase Q-like...    59   7e-07
ref|XP_006431828.1| hypothetical protein CICLE_v10000077mg [Citr...    58   2e-06
ref|XP_007042260.1| DNA helicase isoform 1 [Theobroma cacao] gi|...    55   8e-06

>ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communis]
            gi|223529772|gb|EEF31710.1| DNA helicase hus2, putative
            [Ricinus communis]
          Length = 1233

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 39/105 (37%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
 Frame = +1

Query: 1    DGNDSSMYDNSEVIKRRRDSSGALDANSNEDDDFTDSAGVSKKRATKGGLDKNAENDVST 180
            D N SS   +++ +KRRRD+S A + N+ E DDFT S G SKKR  K    +N + D+ T
Sbjct: 1111 DKNSSSSNGSNDSVKRRRDASRAPNGNAEEADDFTKSTGRSKKRVAK---LQNKDTDIYT 1167

Query: 181  V-PTYDEQCIXXXXXXXXXXXXXXXXXXXSIADQSGSGRVLPSWS 312
               T + QC+                     A ++ +GRVLPSWS
Sbjct: 1168 SRETNNSQCLDDDLDFEDSCHDFETNGSAIEAGKNDAGRVLPSWS 1212


>emb|CBI29756.3| unnamed protein product [Vitis vinifera]
          Length = 1235

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 40/104 (38%), Positives = 51/104 (49%)
 Frame = +1

Query: 1    DGNDSSMYDNSEVIKRRRDSSGALDANSNEDDDFTDSAGVSKKRATKGGLDKNAENDVST 180
            D N SS  D+++ IKRRR+S+  LDAN  EDDDFT S   S+ RA K   +K  E + + 
Sbjct: 1087 DKNSSSSNDSTDTIKRRRESAKVLDANP-EDDDFTKSTDRSRGRAMKRH-NKGGEANNTR 1144

Query: 181  VPTYDEQCIXXXXXXXXXXXXXXXXXXXSIADQSGSGRVLPSWS 312
               Y  QCI                      D+ G+ R LPSWS
Sbjct: 1145 ETDYYNQCIDDDLDFDDANCDVAINGSAPKVDRDGARRTLPSWS 1188


>ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Vitis vinifera]
          Length = 1224

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 40/104 (38%), Positives = 51/104 (49%)
 Frame = +1

Query: 1    DGNDSSMYDNSEVIKRRRDSSGALDANSNEDDDFTDSAGVSKKRATKGGLDKNAENDVST 180
            D N SS  D+++ IKRRR+S+  LDAN  EDDDFT S   S+ RA K   +K  E + + 
Sbjct: 1076 DKNSSSSNDSTDTIKRRRESAKVLDANP-EDDDFTKSTDRSRGRAMKRH-NKGGEANNTR 1133

Query: 181  VPTYDEQCIXXXXXXXXXXXXXXXXXXXSIADQSGSGRVLPSWS 312
               Y  QCI                      D+ G+ R LPSWS
Sbjct: 1134 ETDYYNQCIDDDLDFDDANCDVAINGSAPKVDRDGARRTLPSWS 1177


>ref|XP_006471018.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like isoform X1
            [Citrus sinensis] gi|568833708|ref|XP_006471019.1|
            PREDICTED: ATP-dependent DNA helicase Q-like 4A-like
            isoform X2 [Citrus sinensis]
          Length = 1212

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
 Frame = +1

Query: 1    DGNDSSMYDNSEVIKRRRDSSGALDANSNEDDDFTDSAGVSKKRATKGGLDKNAENDVST 180
            D N SS  D+++  KRRRD + A +AN  +DDDFT S   SKKRA+K      ++N    
Sbjct: 1106 DKNGSSSNDSNDSGKRRRDENEAPNANKGDDDDFTKSTARSKKRASK------SQNKTVE 1159

Query: 181  VPTYDE----QCIXXXXXXXXXXXXXXXXXXXSIADQSGSGRVLPSWSAFKE 324
            V  ++E    +C+                      DQ+  GRVLP WS F E
Sbjct: 1160 VINHNEPDSYECVDDLDFDEYEYVYEMNGSTTK-PDQNNGGRVLPRWSMFSE 1210


>ref|XP_006431828.1| hypothetical protein CICLE_v10000077mg [Citrus clementina]
            gi|557533950|gb|ESR45068.1| hypothetical protein
            CICLE_v10000077mg [Citrus clementina]
          Length = 1151

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
 Frame = +1

Query: 1    DGNDSSMYDNSEVIKRRRDSSGALDANSNEDDDFTDSAGVSKKRATKGGLDKNAENDVST 180
            D N SS  D+++  KRRRD + A ++N  +DDDFT S   SKKRA+K      ++N    
Sbjct: 1045 DKNGSSSNDSNDSGKRRRDENEAPNSNKGDDDDFTKSTARSKKRASK------SQNKTVE 1098

Query: 181  VPTYDE----QCIXXXXXXXXXXXXXXXXXXXSIADQSGSGRVLPSWSAFKE 324
            V  ++E    +C+                      DQ+  GRVLP WS F E
Sbjct: 1099 VINHNEPDSYECVDDLDFDEYEYVYEMNGSTTK-PDQNNGGRVLPRWSMFSE 1149


>ref|XP_007042260.1| DNA helicase isoform 1 [Theobroma cacao] gi|508706195|gb|EOX98091.1|
            DNA helicase isoform 1 [Theobroma cacao]
          Length = 1250

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 39/105 (37%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
 Frame = +1

Query: 1    DGNDSSMYDNSEVIKRRRDSSGALDANSNEDDDFTDSAGVSKKRATKGGLDKNAENDVST 180
            D N SS  D+++  KRRRD++GA  AN  +DDDFT S   SKKR  K   +    +  S 
Sbjct: 1147 DRNSSSSNDSNDSTKRRRDANGAPKANV-DDDDFTRSTSRSKKRTVKMQNNDGGAHS-SK 1204

Query: 181  VPTYDEQCIXXXXXXXXXXXXXXXXXXXSI-ADQSGSGRVLPSWS 312
             P Y+ QC                     +     G+GRVLPSWS
Sbjct: 1205 DPDYNNQCTGNDLDFDDYDDYGVESKCPEMKVHVDGTGRVLPSWS 1249


Top