BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00056963
         (314 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007040996.1| Pentatricopeptide repeat (PPR) superfamily p...   136   3e-30
ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containi...   134   1e-29
emb|CBI27232.3| unnamed protein product [Vitis vinifera]              134   1e-29
ref|XP_007138861.1| hypothetical protein PHAVU_009G243700g [Phas...   129   3e-28
ref|XP_002528143.1| pentatricopeptide repeat-containing protein,...   129   3e-28
ref|XP_004295517.1| PREDICTED: pentatricopeptide repeat-containi...   128   7e-28
ref|XP_006586948.1| PREDICTED: pentatricopeptide repeat-containi...   127   2e-27
ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containi...   127   2e-27
ref|XP_007211368.1| hypothetical protein PRUPE_ppa002507mg [Prun...   126   3e-27
ref|XP_004232626.1| PREDICTED: pentatricopeptide repeat-containi...   125   6e-27
ref|XP_002297917.1| hypothetical protein POPTR_0001s12190g [Popu...   125   6e-27
ref|XP_006363176.1| PREDICTED: pentatricopeptide repeat-containi...   124   1e-26
gb|EYU22630.1| hypothetical protein MIMGU_mgv1a021685mg, partial...   122   4e-26
ref|XP_002304600.2| hypothetical protein POPTR_0003s15360g [Popu...   122   4e-26
ref|XP_004487899.1| PREDICTED: pentatricopeptide repeat-containi...   122   4e-26
ref|XP_006468575.1| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25
ref|XP_006448599.1| hypothetical protein CICLE_v10014519mg [Citr...   118   7e-25
ref|XP_006283284.1| hypothetical protein CARUB_v10004320mg [Caps...   117   2e-24
ref|XP_003605339.1| Pentatricopeptide repeat-containing protein ...   114   1e-23
ref|XP_003594857.1| Pentatricopeptide repeat-containing protein ...   114   1e-23

>ref|XP_007040996.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao] gi|508704931|gb|EOX96827.1| Pentatricopeptide
           repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 636

 Score =  136 bits (343), Expect = 3e-30
 Identities = 62/88 (70%), Positives = 77/88 (87%)
 Frame = -3

Query: 309 CDPDIGTCNIFLKILGEKVNPPQDGRDFLDELVLRLSKRQRIVGASKIVEVMLQKYLCPM 130
           CDPDI TCNIFL+ L EKV+PPQDGR+FLDELV+RL KRQR+ GASKIV+VMLQK+L P 
Sbjct: 547 CDPDIATCNIFLRTLREKVDPPQDGREFLDELVIRLFKRQRVFGASKIVQVMLQKFLPPK 606

Query: 129 ASTLEKVIQDLCKHKKVRAAIDECWRKL 46
           AST  +V+++LCK KK++AAID+CWR +
Sbjct: 607 ASTWARVVEELCKPKKIQAAIDKCWRNI 634


>ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  134 bits (337), Expect = 1e-29
 Identities = 63/89 (70%), Positives = 76/89 (85%)
 Frame = -3

Query: 312 GCDPDIGTCNIFLKILGEKVNPPQDGRDFLDELVLRLSKRQRIVGASKIVEVMLQKYLCP 133
           GC+PD+ TCNIFL  L EK+NPPQDGR+FLDELV+RL KRQRIVGA+KI+EVMLQK+L P
Sbjct: 554 GCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPP 613

Query: 132 MASTLEKVIQDLCKHKKVRAAIDECWRKL 46
            AST E++I +LCK KKV+A ID+CW  L
Sbjct: 614 NASTWERIIPELCKPKKVQAIIDKCWSSL 642


>emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  134 bits (337), Expect = 1e-29
 Identities = 63/89 (70%), Positives = 76/89 (85%)
 Frame = -3

Query: 312 GCDPDIGTCNIFLKILGEKVNPPQDGRDFLDELVLRLSKRQRIVGASKIVEVMLQKYLCP 133
           GC+PD+ TCNIFL  L EK+NPPQDGR+FLDELV+RL KRQRIVGA+KI+EVMLQK+L P
Sbjct: 570 GCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPP 629

Query: 132 MASTLEKVIQDLCKHKKVRAAIDECWRKL 46
            AST E++I +LCK KKV+A ID+CW  L
Sbjct: 630 NASTWERIIPELCKPKKVQAIIDKCWSSL 658


>ref|XP_007138861.1| hypothetical protein PHAVU_009G243700g [Phaseolus vulgaris]
           gi|561011948|gb|ESW10855.1| hypothetical protein
           PHAVU_009G243700g [Phaseolus vulgaris]
          Length = 645

 Score =  129 bits (325), Expect = 3e-28
 Identities = 60/89 (67%), Positives = 70/89 (78%)
 Frame = -3

Query: 312 GCDPDIGTCNIFLKILGEKVNPPQDGRDFLDELVLRLSKRQRIVGASKIVEVMLQKYLCP 133
           GCDPD  TC++FLK L E VNPPQDGR+FLDELV+RL KRQR +GASKI+EVML K+L P
Sbjct: 555 GCDPDFITCDVFLKTLRENVNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLHKFLLP 614

Query: 132 MASTLEKVIQDLCKHKKVRAAIDECWRKL 46
            AST   ++Q LCK K+VR  I ECW KL
Sbjct: 615 KASTWAMIVQQLCKPKRVRKVISECWSKL 643


>ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532441|gb|EEF34234.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 653

 Score =  129 bits (325), Expect = 3e-28
 Identities = 60/89 (67%), Positives = 75/89 (84%)
 Frame = -3

Query: 312 GCDPDIGTCNIFLKILGEKVNPPQDGRDFLDELVLRLSKRQRIVGASKIVEVMLQKYLCP 133
           GCDPD+ TCNIFL++L EK++PPQDG  FLDELV+RL KRQR +GASKIVEVMLQK+L P
Sbjct: 563 GCDPDLVTCNIFLRMLREKLDPPQDGAKFLDELVVRLLKRQRNLGASKIVEVMLQKFLSP 622

Query: 132 MASTLEKVIQDLCKHKKVRAAIDECWRKL 46
            AST  +V+ +LC+ KK++A ID+CW KL
Sbjct: 623 KASTWARVVHELCQPKKIQAVIDKCWSKL 651


>ref|XP_004295517.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Fragaria vesca subsp. vesca]
          Length = 647

 Score =  128 bits (322), Expect = 7e-28
 Identities = 61/89 (68%), Positives = 74/89 (83%)
 Frame = -3

Query: 312 GCDPDIGTCNIFLKILGEKVNPPQDGRDFLDELVLRLSKRQRIVGASKIVEVMLQKYLCP 133
           GCDPD+ TC+IFL  LGEK++PPQDGR+FL+ELV+RL KRQR VGA +IVEVML+K+L P
Sbjct: 557 GCDPDLVTCDIFLTTLGEKLDPPQDGREFLNELVVRLFKRQRTVGAFRIVEVMLKKFLPP 616

Query: 132 MASTLEKVIQDLCKHKKVRAAIDECWRKL 46
            A T   V+Q+LCK KKVRAAID+CW  L
Sbjct: 617 TACTWTTVVQELCKPKKVRAAIDKCWSSL 645


>ref|XP_006586948.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like isoform X7 [Glycine max]
          Length = 482

 Score =  127 bits (318), Expect = 2e-27
 Identities = 59/89 (66%), Positives = 70/89 (78%)
 Frame = -3

Query: 312 GCDPDIGTCNIFLKILGEKVNPPQDGRDFLDELVLRLSKRQRIVGASKIVEVMLQKYLCP 133
           GCDPD  TC+IFLK L E +NPPQDGR+FLDELV+RL KRQR +GASKI+EVM+ K+L P
Sbjct: 392 GCDPDFITCDIFLKTLRENMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMMHKFLLP 451

Query: 132 MASTLEKVIQDLCKHKKVRAAIDECWRKL 46
            AST   V+Q +CK K VR AI ECW +L
Sbjct: 452 KASTWAMVVQQVCKPKNVRKAISECWSRL 480


>ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like isoform X1 [Glycine max]
           gi|571476386|ref|XP_006586943.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like isoform X2 [Glycine max]
           gi|571476388|ref|XP_006586944.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like isoform X3 [Glycine max]
           gi|571476390|ref|XP_006586945.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like isoform X4 [Glycine max]
           gi|571476393|ref|XP_006586946.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like isoform X5 [Glycine max]
           gi|571476395|ref|XP_006586947.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like isoform X6 [Glycine max]
          Length = 642

 Score =  127 bits (318), Expect = 2e-27
 Identities = 59/89 (66%), Positives = 70/89 (78%)
 Frame = -3

Query: 312 GCDPDIGTCNIFLKILGEKVNPPQDGRDFLDELVLRLSKRQRIVGASKIVEVMLQKYLCP 133
           GCDPD  TC+IFLK L E +NPPQDGR+FLDELV+RL KRQR +GASKI+EVM+ K+L P
Sbjct: 552 GCDPDFITCDIFLKTLRENMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMMHKFLLP 611

Query: 132 MASTLEKVIQDLCKHKKVRAAIDECWRKL 46
            AST   V+Q +CK K VR AI ECW +L
Sbjct: 612 KASTWAMVVQQVCKPKNVRKAISECWSRL 640


>ref|XP_007211368.1| hypothetical protein PRUPE_ppa002507mg [Prunus persica]
           gi|462407233|gb|EMJ12567.1| hypothetical protein
           PRUPE_ppa002507mg [Prunus persica]
          Length = 664

 Score =  126 bits (317), Expect = 3e-27
 Identities = 61/89 (68%), Positives = 75/89 (84%)
 Frame = -3

Query: 312 GCDPDIGTCNIFLKILGEKVNPPQDGRDFLDELVLRLSKRQRIVGASKIVEVMLQKYLCP 133
           GCDPD  TC+IFL+ L E+++PPQDGR+FL+ELV+RL K+QRIVGAS IVEVMLQK+L P
Sbjct: 574 GCDPDSVTCDIFLRSLRERLDPPQDGREFLNELVVRLFKQQRIVGASIIVEVMLQKFLPP 633

Query: 132 MASTLEKVIQDLCKHKKVRAAIDECWRKL 46
            AST  +V+Q+LCK K VRAAID+CW  L
Sbjct: 634 KASTWTRVVQELCKPKMVRAAIDKCWSSL 662


>ref|XP_004232626.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Solanum lycopersicum]
          Length = 717

 Score =  125 bits (314), Expect = 6e-27
 Identities = 59/89 (66%), Positives = 72/89 (80%)
 Frame = -3

Query: 312 GCDPDIGTCNIFLKILGEKVNPPQDGRDFLDELVLRLSKRQRIVGASKIVEVMLQKYLCP 133
           GCDPD  TCNIFLK L EK NP QDG DFLD+LVL+L +RQRI+GAS+I+EVMLQK L P
Sbjct: 627 GCDPDKITCNIFLKTLNEKANPSQDGEDFLDKLVLQLYRRQRIIGASRIIEVMLQKILSP 686

Query: 132 MASTLEKVIQDLCKHKKVRAAIDECWRKL 46
            +ST E +I++LCK KKV+ AI++CW  L
Sbjct: 687 KSSTWEMIIRELCKPKKVQGAINKCWSDL 715


>ref|XP_002297917.1| hypothetical protein POPTR_0001s12190g [Populus trichocarpa]
           gi|222845175|gb|EEE82722.1| hypothetical protein
           POPTR_0001s12190g [Populus trichocarpa]
          Length = 670

 Score =  125 bits (314), Expect = 6e-27
 Identities = 58/86 (67%), Positives = 73/86 (84%)
 Frame = -3

Query: 312 GCDPDIGTCNIFLKILGEKVNPPQDGRDFLDELVLRLSKRQRIVGASKIVEVMLQKYLCP 133
           GCDPD+ TC IFL++L EK++PPQDGR+FLDELV+RL KRQR++GASKIVEVMLQK L P
Sbjct: 581 GCDPDLVTCTIFLRMLREKLDPPQDGREFLDELVVRLLKRQRVLGASKIVEVMLQKLLPP 640

Query: 132 MASTLEKVIQDLCKHKKVRAAIDECW 55
             ST  +V+++LCK KKV+A I +CW
Sbjct: 641 KHSTWARVVENLCKPKKVQAVIQKCW 666


>ref|XP_006363176.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like isoform X1 [Solanum tuberosum]
           gi|565395083|ref|XP_006363177.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like isoform X2 [Solanum tuberosum]
          Length = 717

 Score =  124 bits (311), Expect = 1e-26
 Identities = 58/89 (65%), Positives = 72/89 (80%)
 Frame = -3

Query: 312 GCDPDIGTCNIFLKILGEKVNPPQDGRDFLDELVLRLSKRQRIVGASKIVEVMLQKYLCP 133
           GCDPD  TCNIFLK L +K NP QDG DFLD+LVL+L +RQRIVGAS+I+EVMLQK + P
Sbjct: 627 GCDPDTITCNIFLKTLNDKANPSQDGEDFLDKLVLQLYRRQRIVGASRIIEVMLQKIIYP 686

Query: 132 MASTLEKVIQDLCKHKKVRAAIDECWRKL 46
            +ST E +I++LCK KKV+ AI++CW  L
Sbjct: 687 KSSTWEMIIRELCKPKKVQGAINKCWSDL 715


>gb|EYU22630.1| hypothetical protein MIMGU_mgv1a021685mg, partial [Mimulus
           guttatus]
          Length = 590

 Score =  122 bits (307), Expect = 4e-26
 Identities = 58/89 (65%), Positives = 72/89 (80%)
 Frame = -3

Query: 312 GCDPDIGTCNIFLKILGEKVNPPQDGRDFLDELVLRLSKRQRIVGASKIVEVMLQKYLCP 133
           GCDPD  TCNIFL  L EK +PP+DG +FLDELV+RL KRQRI GASKI+EVML+ +L P
Sbjct: 500 GCDPDSVTCNIFLASLKEKPDPPRDGGEFLDELVVRLHKRQRIDGASKIIEVMLRCFLHP 559

Query: 132 MASTLEKVIQDLCKHKKVRAAIDECWRKL 46
            AST +KV++++CK KK+RA ID CW +L
Sbjct: 560 KASTWDKVVREICKPKKIRAVIDRCWSEL 588


>ref|XP_002304600.2| hypothetical protein POPTR_0003s15360g [Populus trichocarpa]
           gi|550343237|gb|EEE79579.2| hypothetical protein
           POPTR_0003s15360g [Populus trichocarpa]
          Length = 672

 Score =  122 bits (307), Expect = 4e-26
 Identities = 58/86 (67%), Positives = 71/86 (82%)
 Frame = -3

Query: 312 GCDPDIGTCNIFLKILGEKVNPPQDGRDFLDELVLRLSKRQRIVGASKIVEVMLQKYLCP 133
           GCDPD+ TC IFL+ L EK++PPQDGR+FLD LV+RL KRQR++GASKIVEVMLQK L P
Sbjct: 582 GCDPDLVTCIIFLRTLREKLDPPQDGREFLDGLVVRLLKRQRVLGASKIVEVMLQKLLPP 641

Query: 132 MASTLEKVIQDLCKHKKVRAAIDECW 55
             ST  +V++DLC  KKV+AAI +CW
Sbjct: 642 KPSTWTRVVEDLCNPKKVQAAIQKCW 667


>ref|XP_004487899.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like isoform X1 [Cicer arietinum]
          Length = 649

 Score =  122 bits (307), Expect = 4e-26
 Identities = 58/89 (65%), Positives = 69/89 (77%)
 Frame = -3

Query: 312 GCDPDIGTCNIFLKILGEKVNPPQDGRDFLDELVLRLSKRQRIVGASKIVEVMLQKYLCP 133
           GCDPD  TC+IFLK L + +NPPQDGR+FLDELV+RL KRQR VGAS ++EVML K+L P
Sbjct: 559 GCDPDFITCDIFLKSLRDNMNPPQDGREFLDELVVRLIKRQRTVGASNVIEVMLPKFLLP 618

Query: 132 MASTLEKVIQDLCKHKKVRAAIDECWRKL 46
            AST   V+Q LCK  KVR  I+ECW +L
Sbjct: 619 KASTWALVVQHLCKPMKVRKTINECWSRL 647


>ref|XP_006468575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Citrus sinensis]
          Length = 664

 Score =  119 bits (299), Expect = 3e-25
 Identities = 55/89 (61%), Positives = 69/89 (77%)
 Frame = -3

Query: 312 GCDPDIGTCNIFLKILGEKVNPPQDGRDFLDELVLRLSKRQRIVGASKIVEVMLQKYLCP 133
           GCDPD+ TCNIFL  L EK+  PQDG DFL+EL +RL KRQR  G  KIVEVMLQK+L P
Sbjct: 574 GCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSP 633

Query: 132 MASTLEKVIQDLCKHKKVRAAIDECWRKL 46
             ST E+V+Q+LC+ K+++AAI++CW  L
Sbjct: 634 QTSTWERVVQELCRPKRIQAAINKCWSNL 662


>ref|XP_006448599.1| hypothetical protein CICLE_v10014519mg [Citrus clementina]
           gi|557551210|gb|ESR61839.1| hypothetical protein
           CICLE_v10014519mg [Citrus clementina]
          Length = 664

 Score =  118 bits (296), Expect = 7e-25
 Identities = 55/89 (61%), Positives = 69/89 (77%)
 Frame = -3

Query: 312 GCDPDIGTCNIFLKILGEKVNPPQDGRDFLDELVLRLSKRQRIVGASKIVEVMLQKYLCP 133
           GCDPD+ TCNIFL  L EK+  PQDG DFL+EL +RL KRQR  G  KIVEVMLQK+L P
Sbjct: 574 GCDPDLVTCNIFLTALKEKLETPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLPP 633

Query: 132 MASTLEKVIQDLCKHKKVRAAIDECWRKL 46
             ST E+V+Q+LC+ K+++AAI++CW  L
Sbjct: 634 KTSTWERVVQELCRPKRIQAAINKCWSNL 662


>ref|XP_006283284.1| hypothetical protein CARUB_v10004320mg [Capsella rubella]
           gi|482551989|gb|EOA16182.1| hypothetical protein
           CARUB_v10004320mg [Capsella rubella]
          Length = 660

 Score =  117 bits (293), Expect = 2e-24
 Identities = 55/89 (61%), Positives = 68/89 (76%)
 Frame = -3

Query: 312 GCDPDIGTCNIFLKILGEKVNPPQDGRDFLDELVLRLSKRQRIVGASKIVEVMLQKYLCP 133
           GCDPD+ TCN FLK L EK +  ++GR+FL+ELVLRL KRQR+ GA KIVEVML KYL P
Sbjct: 570 GCDPDVITCNTFLKTLSEKSDSCEEGRNFLEELVLRLLKRQRVSGACKIVEVMLDKYLTP 629

Query: 132 MASTLEKVIQDLCKHKKVRAAIDECWRKL 46
             ST   ++ ++CK KK+ AAID+CWR L
Sbjct: 630 KISTWVLIVPEICKPKKINAAIDKCWRNL 658


>ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355506394|gb|AES87536.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 472

 Score =  114 bits (286), Expect = 1e-23
 Identities = 55/89 (61%), Positives = 66/89 (74%)
 Frame = -3

Query: 312 GCDPDIGTCNIFLKILGEKVNPPQDGRDFLDELVLRLSKRQRIVGASKIVEVMLQKYLCP 133
           GCDPD  TC+IFLK L + ++PPQDGR+FLDELV+RL KRQR VGAS I+EVMLQK+L P
Sbjct: 382 GCDPDFITCDIFLKTLRDNMDPPQDGREFLDELVVRLIKRQRTVGASNIIEVMLQKFLLP 441

Query: 132 MASTLEKVIQDLCKHKKVRAAIDECWRKL 46
             ST    +Q LCK  KVR  I EC  ++
Sbjct: 442 KPSTWALAVQQLCKPMKVRKTISECQSRM 470


>ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355483905|gb|AES65108.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  114 bits (286), Expect = 1e-23
 Identities = 55/89 (61%), Positives = 66/89 (74%)
 Frame = -3

Query: 312 GCDPDIGTCNIFLKILGEKVNPPQDGRDFLDELVLRLSKRQRIVGASKIVEVMLQKYLCP 133
           GCDPD  TC+IFLK L + ++PPQDGR+FLDELV+RL KRQR VGAS I+EVMLQK+L P
Sbjct: 557 GCDPDFITCDIFLKTLRDNMDPPQDGREFLDELVVRLIKRQRTVGASNIIEVMLQKFLLP 616

Query: 132 MASTLEKVIQDLCKHKKVRAAIDECWRKL 46
             ST    +Q LCK  KVR  I EC  ++
Sbjct: 617 KPSTWALAVQQLCKPMKVRKTISECQSRM 645