BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00056726
         (247 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631274.1| PREDICTED: pentatricopeptide repeat-containi...   115   6e-24
emb|CBI28554.3| unnamed protein product [Vitis vinifera]              115   6e-24
emb|CAN65318.1| hypothetical protein VITISV_006411 [Vitis vinifera]   115   6e-24
ref|XP_006483887.1| PREDICTED: pentatricopeptide repeat-containi...   111   1e-22
ref|XP_006438343.1| hypothetical protein CICLE_v100305772mg, par...   111   1e-22
gb|EXB82575.1| hypothetical protein L484_027752 [Morus notabilis]     108   6e-22
ref|XP_002525359.1| pentatricopeptide repeat-containing protein,...   108   8e-22
ref|XP_006380228.1| pentatricopeptide repeat-containing family p...   105   5e-21
ref|XP_007224509.1| hypothetical protein PRUPE_ppa022727mg, part...   105   5e-21
ref|XP_004161088.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   105   7e-21
ref|XP_004143068.1| PREDICTED: pentatricopeptide repeat-containi...   105   7e-21
ref|XP_006305992.1| hypothetical protein CARUB_v10011268mg [Caps...   104   1e-20
ref|XP_006585945.1| PREDICTED: pentatricopeptide repeat-containi...   103   2e-20
ref|XP_006416082.1| hypothetical protein EUTSA_v10006630mg [Eutr...   103   2e-20
ref|XP_004298478.1| PREDICTED: putative pentatricopeptide repeat...   102   6e-20
ref|XP_002890584.1| F28C11.9 [Arabidopsis lyrata subsp. lyrata] ...   102   7e-20
ref|XP_007044687.1| F28C11.9, putative [Theobroma cacao] gi|5087...   101   9e-20
ref|XP_007153747.1| hypothetical protein PHAVU_003G061700g [Phas...   101   1e-19
gb|EYU22504.1| hypothetical protein MIMGU_mgv1a018311mg, partial...   100   2e-19
gb|AFW75841.1| putative pentatricopeptide repeat family protein ...    97   2e-18

>ref|XP_003631274.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic-like [Vitis vinifera]
          Length = 667

 Score =  115 bits (288), Expect = 6e-24
 Identities = 52/81 (64%), Positives = 67/81 (82%)
 Frame = +3

Query: 3   SLVDAYSRVGLINLSRRVFDQIAEPNLICFTSMISGYARNGMGREGLEMLDSLYCRGIMP 182
           SL+DAYS+ G + LS ++F+Q+  PN ICFTS+I+GYARNGMGREGLEML+ +  +G+ P
Sbjct: 458 SLIDAYSKYGHVELSHQIFEQLHSPNAICFTSIINGYARNGMGREGLEMLEIMAKQGLKP 517

Query: 183 DSITFLSLLTGCSHSGLVKEG 245
           D +TFL  LTGCSHSGLV+EG
Sbjct: 518 DRVTFLCALTGCSHSGLVEEG 538


>emb|CBI28554.3| unnamed protein product [Vitis vinifera]
          Length = 1125

 Score =  115 bits (288), Expect = 6e-24
 Identities = 52/81 (64%), Positives = 67/81 (82%)
 Frame = +3

Query: 3   SLVDAYSRVGLINLSRRVFDQIAEPNLICFTSMISGYARNGMGREGLEMLDSLYCRGIMP 182
           SL+DAYS+ G + LS ++F+Q+  PN ICFTS+I+GYARNGMGREGLEML+ +  +G+ P
Sbjct: 458 SLIDAYSKYGHVELSHQIFEQLHSPNAICFTSIINGYARNGMGREGLEMLEIMAKQGLKP 517

Query: 183 DSITFLSLLTGCSHSGLVKEG 245
           D +TFL  LTGCSHSGLV+EG
Sbjct: 518 DRVTFLCALTGCSHSGLVEEG 538


>emb|CAN65318.1| hypothetical protein VITISV_006411 [Vitis vinifera]
          Length = 1052

 Score =  115 bits (288), Expect = 6e-24
 Identities = 52/81 (64%), Positives = 67/81 (82%)
 Frame = +3

Query: 3   SLVDAYSRVGLINLSRRVFDQIAEPNLICFTSMISGYARNGMGREGLEMLDSLYCRGIMP 182
           SL+DAYS+ G + LS ++F+Q+  PN ICFTS+I+GYARNGMGREGLEML+ +  +G+ P
Sbjct: 447 SLIDAYSKYGHVELSHQIFEQLHSPNAICFTSIINGYARNGMGREGLEMLEIMAKQGLKP 506

Query: 183 DSITFLSLLTGCSHSGLVKEG 245
           D +TFL  LTGCSHSGLV+EG
Sbjct: 507 DRVTFLCALTGCSHSGLVEEG 527


>ref|XP_006483887.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Citrus sinensis]
          Length = 666

 Score =  111 bits (277), Expect = 1e-22
 Identities = 49/81 (60%), Positives = 67/81 (82%)
 Frame = +3

Query: 3   SLVDAYSRVGLINLSRRVFDQIAEPNLICFTSMISGYARNGMGREGLEMLDSLYCRGIMP 182
           SL+DAYSR G I LS +VF +I  PN++CFTS+++GY+RNGMGRE L+ML+ +  RG++P
Sbjct: 457 SLMDAYSRCGHIELSHQVFKKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIP 516

Query: 183 DSITFLSLLTGCSHSGLVKEG 245
           D +TFL +L GC+HSG+VKEG
Sbjct: 517 DKVTFLCVLAGCNHSGMVKEG 537


>ref|XP_006438343.1| hypothetical protein CICLE_v100305772mg, partial [Citrus
           clementina] gi|557540539|gb|ESR51583.1| hypothetical
           protein CICLE_v100305772mg, partial [Citrus clementina]
          Length = 928

 Score =  111 bits (277), Expect = 1e-22
 Identities = 49/81 (60%), Positives = 67/81 (82%)
 Frame = +3

Query: 3   SLVDAYSRVGLINLSRRVFDQIAEPNLICFTSMISGYARNGMGREGLEMLDSLYCRGIMP 182
           SL+DAYSR G I LS +VF +I  PN++CFTS+++GY+RNGMGRE L+ML+ +  RG++P
Sbjct: 457 SLMDAYSRCGHIELSHQVFKKIPSPNVVCFTSIMNGYSRNGMGREALDMLEVMIQRGLIP 516

Query: 183 DSITFLSLLTGCSHSGLVKEG 245
           D +TFL +L GC+HSG+VKEG
Sbjct: 517 DKVTFLCVLAGCNHSGMVKEG 537


>gb|EXB82575.1| hypothetical protein L484_027752 [Morus notabilis]
          Length = 674

 Score =  108 bits (271), Expect = 6e-22
 Identities = 47/81 (58%), Positives = 67/81 (82%)
 Frame = +3

Query: 3   SLVDAYSRVGLINLSRRVFDQIAEPNLICFTSMISGYARNGMGREGLEMLDSLYCRGIMP 182
           SL+DAYS+ G I LSR+VF+ ++ PN+ CFTS+I+GYA+NGMGRE L++  ++  +G+ P
Sbjct: 465 SLIDAYSKHGYIKLSRQVFENLSSPNVKCFTSIINGYAQNGMGRESLDLFHAMIRKGLKP 524

Query: 183 DSITFLSLLTGCSHSGLVKEG 245
           D +TFL +LTGC+HSGLV+EG
Sbjct: 525 DKVTFLCVLTGCNHSGLVREG 545


>ref|XP_002525359.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535322|gb|EEF36997.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 483

 Score =  108 bits (270), Expect = 8e-22
 Identities = 47/81 (58%), Positives = 66/81 (81%)
 Frame = +3

Query: 3   SLVDAYSRVGLINLSRRVFDQIAEPNLICFTSMISGYARNGMGREGLEMLDSLYCRGIMP 182
           SL+D YSR G + LS++VF Q++ PN+ C TS+I+G+ARNGMGRE LE+ +++  +G+ P
Sbjct: 300 SLIDGYSRSGKVELSQKVFSQLSSPNVFCLTSIINGFARNGMGRECLEIFETMIQKGLKP 359

Query: 183 DSITFLSLLTGCSHSGLVKEG 245
           D +TFL +LTGCSHSGLV+EG
Sbjct: 360 DKVTFLCVLTGCSHSGLVEEG 380


>ref|XP_006380228.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550333749|gb|ERP58025.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 702

 Score =  105 bits (263), Expect = 5e-21
 Identities = 46/81 (56%), Positives = 66/81 (81%)
 Frame = +3

Query: 3   SLVDAYSRVGLINLSRRVFDQIAEPNLICFTSMISGYARNGMGREGLEMLDSLYCRGIMP 182
           SL+DAYSR G + LS++VF+Q+  PN+ICFTS+I+G A+NG+GRE L+  +++  +G+ P
Sbjct: 475 SLIDAYSRCGHVQLSKKVFEQLPSPNVICFTSIINGLAQNGLGRECLQTFEAMIRKGLEP 534

Query: 183 DSITFLSLLTGCSHSGLVKEG 245
           D +TFL +LTGCSHSGL +EG
Sbjct: 535 DKVTFLCVLTGCSHSGLFEEG 555


>ref|XP_007224509.1| hypothetical protein PRUPE_ppa022727mg, partial [Prunus persica]
           gi|462421445|gb|EMJ25708.1| hypothetical protein
           PRUPE_ppa022727mg, partial [Prunus persica]
          Length = 682

 Score =  105 bits (263), Expect = 5e-21
 Identities = 45/80 (56%), Positives = 64/80 (80%)
 Frame = +3

Query: 3   SLVDAYSRVGLINLSRRVFDQIAEPNLICFTSMISGYARNGMGREGLEMLDSLYCRGIMP 182
           SL+DAY+R G + LSR+VF+++  PN +CFTS+I GYARNGMG EGL +L ++  +G+ P
Sbjct: 474 SLIDAYARCGHVKLSRQVFEELPSPNAVCFTSIIHGYARNGMGSEGLHLLQAMIRKGLKP 533

Query: 183 DSITFLSLLTGCSHSGLVKE 242
           D +T L +L+GC+HSGLV+E
Sbjct: 534 DKVTILGVLSGCNHSGLVEE 553


>ref|XP_004161088.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g13600-like [Cucumis sativus]
          Length = 618

 Score =  105 bits (262), Expect = 7e-21
 Identities = 47/81 (58%), Positives = 65/81 (80%)
 Frame = +3

Query: 3   SLVDAYSRVGLINLSRRVFDQIAEPNLICFTSMISGYARNGMGREGLEMLDSLYCRGIMP 182
           SL+D+YSR G + LS +VF++I  P +ICFTS+I+GYARNG+G+EG+E+L  +  RG+ P
Sbjct: 299 SLMDSYSRCGHVELSWKVFEEIYSPGVICFTSIINGYARNGLGKEGVEILKMMIQRGLKP 358

Query: 183 DSITFLSLLTGCSHSGLVKEG 245
           D +TFL  L GC+HSGLV+EG
Sbjct: 359 DKVTFLCALIGCNHSGLVEEG 379


>ref|XP_004143068.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 812

 Score =  105 bits (262), Expect = 7e-21
 Identities = 47/81 (58%), Positives = 65/81 (80%)
 Frame = +3

Query: 3   SLVDAYSRVGLINLSRRVFDQIAEPNLICFTSMISGYARNGMGREGLEMLDSLYCRGIMP 182
           SL+D+YSR G + LS +VF++I  P +ICFTS+I+GYARNG+G+EG+E+L  +  RG+ P
Sbjct: 457 SLMDSYSRCGHVELSWKVFEEIYSPGVICFTSIINGYARNGLGKEGVEILKMMIQRGLKP 516

Query: 183 DSITFLSLLTGCSHSGLVKEG 245
           D +TFL  L GC+HSGLV+EG
Sbjct: 517 DKVTFLCALIGCNHSGLVEEG 537


>ref|XP_006305992.1| hypothetical protein CARUB_v10011268mg [Capsella rubella]
           gi|482574703|gb|EOA38890.1| hypothetical protein
           CARUB_v10011268mg [Capsella rubella]
          Length = 1077

 Score =  104 bits (260), Expect = 1e-20
 Identities = 48/81 (59%), Positives = 65/81 (80%)
 Frame = +3

Query: 3   SLVDAYSRVGLINLSRRVFDQIAEPNLICFTSMISGYARNGMGREGLEMLDSLYCRGIMP 182
           SL+DAYS+ G   +SR+VF ++  PN+ C+TS+I+GYARNGMGRE LEML  +  + +MP
Sbjct: 431 SLIDAYSKSGQNEVSRKVFIELESPNIFCWTSIINGYARNGMGRECLEMLREMDQKNLMP 490

Query: 183 DSITFLSLLTGCSHSGLVKEG 245
           D +T LS+L+GCSHSGLV+EG
Sbjct: 491 DEVTILSVLSGCSHSGLVEEG 511


>ref|XP_006585945.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Glycine max]
          Length = 668

 Score =  103 bits (258), Expect = 2e-20
 Identities = 46/81 (56%), Positives = 62/81 (76%)
 Frame = +3

Query: 3   SLVDAYSRVGLINLSRRVFDQIAEPNLICFTSMISGYARNGMGREGLEMLDSLYCRGIMP 182
           SLVD+YSR G + LSRR+F+ +  PN ICFTSMI+ YARNG G+EG+ +L ++  RG+ P
Sbjct: 461 SLVDSYSRWGHVELSRRIFESLPSPNAICFTSMINAYARNGAGKEGIAVLQAMIERGLKP 520

Query: 183 DSITFLSLLTGCSHSGLVKEG 245
           D +T L  L GC+H+GLV+EG
Sbjct: 521 DDVTLLCALNGCNHTGLVEEG 541


>ref|XP_006416082.1| hypothetical protein EUTSA_v10006630mg [Eutrema salsugineum]
           gi|557093853|gb|ESQ34435.1| hypothetical protein
           EUTSA_v10006630mg [Eutrema salsugineum]
          Length = 1105

 Score =  103 bits (258), Expect = 2e-20
 Identities = 46/81 (56%), Positives = 66/81 (81%)
 Frame = +3

Query: 3   SLVDAYSRVGLINLSRRVFDQIAEPNLICFTSMISGYARNGMGREGLEMLDSLYCRGIMP 182
           SL+DAYS+ G   +SR+VFD++  PN+ C+TS+I+GYARNGMGR+ +EML  +  + ++P
Sbjct: 459 SLIDAYSKSGQNEVSRKVFDELDSPNIFCWTSIINGYARNGMGRDCVEMLREMDQKNLVP 518

Query: 183 DSITFLSLLTGCSHSGLVKEG 245
           D +T LS+L+GCSHSGLV+EG
Sbjct: 519 DEVTILSVLSGCSHSGLVEEG 539


>ref|XP_004298478.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Fragaria vesca subsp. vesca]
          Length = 658

 Score =  102 bits (254), Expect = 6e-20
 Identities = 45/80 (56%), Positives = 63/80 (78%)
 Frame = +3

Query: 3   SLVDAYSRVGLINLSRRVFDQIAEPNLICFTSMISGYARNGMGREGLEMLDSLYCRGIMP 182
           SL++AY R G + LSR+VFD++  PN+ICFTS+I GYARNGMG E L+++  +  +G+ P
Sbjct: 447 SLIEAYGRCGHVKLSRQVFDELPSPNVICFTSIIHGYARNGMGSECLQLVQDMVEKGLKP 506

Query: 183 DSITFLSLLTGCSHSGLVKE 242
           D +T L +L+GCSHSGLV+E
Sbjct: 507 DKVTVLCVLSGCSHSGLVEE 526


>ref|XP_002890584.1| F28C11.9 [Arabidopsis lyrata subsp. lyrata]
           gi|297336426|gb|EFH66843.1| F28C11.9 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1134

 Score =  102 bits (253), Expect = 7e-20
 Identities = 45/81 (55%), Positives = 64/81 (79%)
 Frame = +3

Query: 3   SLVDAYSRVGLINLSRRVFDQIAEPNLICFTSMISGYARNGMGREGLEMLDSLYCRGIMP 182
           SL+D YS+ G   +SR+VFD++  PN+ C TS+I+GYARNGMGR+ +EML  +  + ++P
Sbjct: 459 SLIDTYSKSGQNEVSRKVFDELDSPNIFCLTSIINGYARNGMGRDCVEMLREMDQKNLIP 518

Query: 183 DSITFLSLLTGCSHSGLVKEG 245
           D +T LS+L+GCSHSGLV+EG
Sbjct: 519 DEVTILSVLSGCSHSGLVEEG 539


>ref|XP_007044687.1| F28C11.9, putative [Theobroma cacao] gi|508708622|gb|EOY00519.1|
           F28C11.9, putative [Theobroma cacao]
          Length = 1063

 Score =  101 bits (252), Expect = 9e-20
 Identities = 43/81 (53%), Positives = 64/81 (79%)
 Frame = +3

Query: 3   SLVDAYSRVGLINLSRRVFDQIAEPNLICFTSMISGYARNGMGREGLEMLDSLYCRGIMP 182
           SL++ YSR G   LS +VF  +  PN+ CFTS+I+GYARNGMG+EG+ +L+++  +G++P
Sbjct: 449 SLINGYSRCGHFELSCQVFKTLPSPNVFCFTSIINGYARNGMGKEGVSLLEAMIQKGLIP 508

Query: 183 DSITFLSLLTGCSHSGLVKEG 245
           D +TFL +L+GC H+GLV+EG
Sbjct: 509 DKVTFLCVLSGCDHAGLVEEG 529


>ref|XP_007153747.1| hypothetical protein PHAVU_003G061700g [Phaseolus vulgaris]
           gi|561027101|gb|ESW25741.1| hypothetical protein
           PHAVU_003G061700g [Phaseolus vulgaris]
          Length = 1082

 Score =  101 bits (251), Expect = 1e-19
 Identities = 44/81 (54%), Positives = 65/81 (80%)
 Frame = +3

Query: 3   SLVDAYSRVGLINLSRRVFDQIAEPNLICFTSMISGYARNGMGREGLEMLDSLYCRGIMP 182
           SL+DAYSR G ++L+RR+F+ +  P+ ICFTSMI+ YARNGMG+EG+ +L ++  R + P
Sbjct: 439 SLMDAYSRSGHVDLTRRIFESLPSPSAICFTSMINAYARNGMGKEGIAVLQAMIERRLRP 498

Query: 183 DSITFLSLLTGCSHSGLVKEG 245
           D +TFL  L+GC+++GLV+EG
Sbjct: 499 DKVTFLCALSGCNYTGLVEEG 519


>gb|EYU22504.1| hypothetical protein MIMGU_mgv1a018311mg, partial [Mimulus
           guttatus]
          Length = 621

 Score =  100 bits (250), Expect = 2e-19
 Identities = 46/80 (57%), Positives = 62/80 (77%)
 Frame = +3

Query: 3   SLVDAYSRVGLINLSRRVFDQIAEPNLICFTSMISGYARNGMGREGLEMLDSLYCRGIMP 182
           SL+DAYS+ G I  SR++F+++  PN+ CFTS+IS  ARNGMG E LEML+ ++  G  P
Sbjct: 412 SLIDAYSKSGEIEFSRQIFNELPSPNVFCFTSIISALARNGMGNECLEMLNGMFRNGREP 471

Query: 183 DSITFLSLLTGCSHSGLVKE 242
           D +TFLS+L GC+HSGLV+E
Sbjct: 472 DRVTFLSVLMGCNHSGLVEE 491


>gb|AFW75841.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 597

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 41/81 (50%), Positives = 60/81 (74%)
 Frame = +3

Query: 3   SLVDAYSRVGLINLSRRVFDQIAEPNLICFTSMISGYARNGMGREGLEMLDSLYCRGIMP 182
           SL+ AY+R G ++ SR VF+ +  PN++CFTSMIS  AR+G G +G+E+L  + CRG+ P
Sbjct: 385 SLISAYARAGQVHSSRSVFESLRSPNVVCFTSMISACARHGDGAKGVELLREMVCRGLKP 444

Query: 183 DSITFLSLLTGCSHSGLVKEG 245
           D +TFL  +TGC  +GL++EG
Sbjct: 445 DDVTFLCAITGCDQAGLIEEG 465