BLASTX nr result
ID: Cocculus23_contig00056671
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00056671
(387 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004300624.1| PREDICTED: uncharacterized protein LOC101302... 60 4e-07
ref|XP_006411976.1| hypothetical protein EUTSA_v10024972mg [Eutr... 59 5e-07
ref|XP_006283489.1| hypothetical protein CARUB_v10004541mg, part... 59 5e-07
ref|XP_007203626.1| hypothetical protein PRUPE_ppa004039mg [Prun... 59 5e-07
ref|XP_002867001.1| transcription factor IIB family protein [Ara... 59 5e-07
ref|NP_195383.1| plant-specific TFIIB-related protein [Arabidops... 59 5e-07
gb|EYU40149.1| hypothetical protein MIMGU_mgv1a020239mg, partial... 59 7e-07
gb|EXB59113.1| Transcription initiation factor IIB [Morus notabi... 59 7e-07
ref|XP_006573580.1| PREDICTED: uncharacterized protein LOC102662... 59 7e-07
ref|XP_007156926.1| hypothetical protein PHAVU_002G028900g [Phas... 59 7e-07
ref|XP_006425704.1| hypothetical protein CICLE_v10025402mg [Citr... 59 7e-07
ref|XP_002310216.2| hypothetical protein POPTR_0007s12640g [Popu... 59 7e-07
ref|XP_007046979.1| Plant-specific TFIIB-related protein [Theobr... 59 7e-07
ref|XP_004512023.1| PREDICTED: transcription initiation factor I... 59 7e-07
ref|XP_004512022.1| PREDICTED: transcription initiation factor I... 59 7e-07
ref|XP_004162331.1| PREDICTED: transcription initiation factor I... 59 7e-07
ref|XP_004143581.1| PREDICTED: transcription initiation factor I... 59 7e-07
gb|AEI98626.1| hypothetical protein 111O18.13 [Coffea canephora] 59 7e-07
ref|XP_002267728.1| PREDICTED: uncharacterized protein LOC100256... 59 7e-07
ref|XP_002521582.1| RNA polymerase II transcription factor, puta... 59 7e-07
>ref|XP_004300624.1| PREDICTED: uncharacterized protein LOC101302943 [Fragaria vesca
subsp. vesca]
Length = 519
Score = 59.7 bits (143), Expect = 4e-07
Identities = 36/78 (46%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Frame = -2
Query: 278 CFAFSVTFSIQKLNLPF*ALARSTNIKEIAINKCFCTRRNPISIFAVATYLAMPI----R 111
C + S QKL +T+I E+ INKCFCTRRNPISI A A YLA + +
Sbjct: 242 CTLLQLNTSAQKL---------ATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRK 292
Query: 110 R*TEICKLTCLTKVFLAR 57
EICK+T LT+V L +
Sbjct: 293 TQAEICKVTGLTEVTLRK 310
>ref|XP_006411976.1| hypothetical protein EUTSA_v10024972mg [Eutrema salsugineum]
gi|557113146|gb|ESQ53429.1| hypothetical protein
EUTSA_v10024972mg [Eutrema salsugineum]
Length = 503
Score = 59.3 bits (142), Expect = 5e-07
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Frame = -2
Query: 212 STNIKEIAINKCFCTRRNPISIFAVATYLAMPI----RR*TEICKLTCLTKVFLAR 57
+T+I E+ INKCFCTRRNPISI A A YLA + + EICK+T LT+V L +
Sbjct: 248 ATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKITGLTEVTLRK 303
>ref|XP_006283489.1| hypothetical protein CARUB_v10004541mg, partial [Capsella rubella]
gi|482552194|gb|EOA16387.1| hypothetical protein
CARUB_v10004541mg, partial [Capsella rubella]
Length = 540
Score = 59.3 bits (142), Expect = 5e-07
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Frame = -2
Query: 212 STNIKEIAINKCFCTRRNPISIFAVATYLAMPI----RR*TEICKLTCLTKVFLAR 57
+T+I E+ INKCFCTRRNPISI A A YLA + + EICK+T LT+V L +
Sbjct: 285 ATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKITGLTEVTLRK 340
>ref|XP_007203626.1| hypothetical protein PRUPE_ppa004039mg [Prunus persica]
gi|462399157|gb|EMJ04825.1| hypothetical protein
PRUPE_ppa004039mg [Prunus persica]
Length = 534
Score = 59.3 bits (142), Expect = 5e-07
Identities = 36/78 (46%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Frame = -2
Query: 278 CFAFSVTFSIQKLNLPF*ALARSTNIKEIAINKCFCTRRNPISIFAVATYLAMPI----R 111
C + S QKL +T+I E+ INKCFCTRRNPISI A A YLA + +
Sbjct: 244 CTLLQLNKSAQKL---------ATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRK 294
Query: 110 R*TEICKLTCLTKVFLAR 57
EICK+T LT+V L +
Sbjct: 295 TQAEICKVTGLTEVTLRK 312
>ref|XP_002867001.1| transcription factor IIB family protein [Arabidopsis lyrata subsp.
lyrata] gi|297312837|gb|EFH43260.1| transcription factor
IIB family protein [Arabidopsis lyrata subsp. lyrata]
Length = 506
Score = 59.3 bits (142), Expect = 5e-07
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Frame = -2
Query: 212 STNIKEIAINKCFCTRRNPISIFAVATYLAMPI----RR*TEICKLTCLTKVFLAR 57
+T+I E+ INKCFCTRRNPISI A A YLA + + EICK+T LT+V L +
Sbjct: 250 ATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKITGLTEVTLRK 305
>ref|NP_195383.1| plant-specific TFIIB-related protein [Arabidopsis thaliana]
gi|2464915|emb|CAB16810.1| transcription initiation
factor like protein [Arabidopsis thaliana]
gi|7270613|emb|CAB80331.1| transcription initiation
factor like protein [Arabidopsis thaliana]
gi|16509378|emb|CAC82714.1| TFIIB-related protein
[Arabidopsis thaliana] gi|30102720|gb|AAP21278.1|
At4g37010 [Arabidopsis thaliana]
gi|39545884|gb|AAR28005.1| TFIIB5/pBrp [Arabidopsis
thaliana] gi|332661282|gb|AEE86682.1| plant-specific
TFIIB-related protein [Arabidopsis thaliana]
Length = 503
Score = 59.3 bits (142), Expect = 5e-07
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Frame = -2
Query: 212 STNIKEIAINKCFCTRRNPISIFAVATYLAMPI----RR*TEICKLTCLTKVFLAR 57
+T+I E+ INKCFCTRRNPISI A A YLA + + EICK+T LT+V L +
Sbjct: 250 ATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKITGLTEVTLRK 305
>gb|EYU40149.1| hypothetical protein MIMGU_mgv1a020239mg, partial [Mimulus
guttatus]
Length = 439
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Frame = -2
Query: 212 STNIKEIAINKCFCTRRNPISIFAVATYLAMPI----RR*TEICKLTCLTKVFLAR 57
+T+I E+ INKCFCTRRNPISI A A YLA + + EICK+T LT+V L +
Sbjct: 252 ATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRK 307
>gb|EXB59113.1| Transcription initiation factor IIB [Morus notabilis]
Length = 514
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Frame = -2
Query: 212 STNIKEIAINKCFCTRRNPISIFAVATYLAMPI----RR*TEICKLTCLTKVFLAR 57
+T+I E+ INKCFCTRRNPISI A A YLA + + EICK+T LT+V L +
Sbjct: 259 ATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRK 314
>ref|XP_006573580.1| PREDICTED: uncharacterized protein LOC102662353 [Glycine max]
Length = 503
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Frame = -2
Query: 212 STNIKEIAINKCFCTRRNPISIFAVATYLAMPI----RR*TEICKLTCLTKVFLAR 57
+T+I E+ INKCFCTRRNPISI A A YLA + + EICK+T LT+V L +
Sbjct: 255 ATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRK 310
>ref|XP_007156926.1| hypothetical protein PHAVU_002G028900g [Phaseolus vulgaris]
gi|561030341|gb|ESW28920.1| hypothetical protein
PHAVU_002G028900g [Phaseolus vulgaris]
Length = 495
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Frame = -2
Query: 212 STNIKEIAINKCFCTRRNPISIFAVATYLAMPI----RR*TEICKLTCLTKVFLAR 57
+T+I E+ INKCFCTRRNPISI A A YLA + + EICK+T LT+V L +
Sbjct: 248 ATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRK 303
>ref|XP_006425704.1| hypothetical protein CICLE_v10025402mg [Citrus clementina]
gi|568824784|ref|XP_006466774.1| PREDICTED:
uncharacterized protein LOC102620952 [Citrus sinensis]
gi|557527694|gb|ESR38944.1| hypothetical protein
CICLE_v10025402mg [Citrus clementina]
Length = 510
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Frame = -2
Query: 212 STNIKEIAINKCFCTRRNPISIFAVATYLAMPI----RR*TEICKLTCLTKVFLAR 57
+T+I E+ INKCFCTRRNPISI A A YLA + + EICK+T LT+V L +
Sbjct: 252 ATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRK 307
>ref|XP_002310216.2| hypothetical protein POPTR_0007s12640g [Populus trichocarpa]
gi|550334739|gb|EEE90666.2| hypothetical protein
POPTR_0007s12640g [Populus trichocarpa]
Length = 514
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Frame = -2
Query: 212 STNIKEIAINKCFCTRRNPISIFAVATYLAMPI----RR*TEICKLTCLTKVFLAR 57
+T+I E+ INKCFCTRRNPISI A A YLA + + EICK+T LT+V L +
Sbjct: 249 ATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRK 304
>ref|XP_007046979.1| Plant-specific TFIIB-related protein [Theobroma cacao]
gi|508699240|gb|EOX91136.1| Plant-specific TFIIB-related
protein [Theobroma cacao]
Length = 527
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Frame = -2
Query: 212 STNIKEIAINKCFCTRRNPISIFAVATYLAMPI----RR*TEICKLTCLTKVFLAR 57
+T+I E+ INKCFCTRRNPISI A A YLA + + EICK+T LT+V L +
Sbjct: 252 ATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRK 307
>ref|XP_004512023.1| PREDICTED: transcription initiation factor IIB 7-like isoform X2
[Cicer arietinum]
Length = 475
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Frame = -2
Query: 212 STNIKEIAINKCFCTRRNPISIFAVATYLAMPI----RR*TEICKLTCLTKVFLAR 57
+T+I E+ INKCFCTRRNPISI A A YLA + + EICK+T LT+V L +
Sbjct: 252 ATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRK 307
>ref|XP_004512022.1| PREDICTED: transcription initiation factor IIB 7-like isoform X1
[Cicer arietinum]
Length = 486
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Frame = -2
Query: 212 STNIKEIAINKCFCTRRNPISIFAVATYLAMPI----RR*TEICKLTCLTKVFLAR 57
+T+I E+ INKCFCTRRNPISI A A YLA + + EICK+T LT+V L +
Sbjct: 252 ATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRK 307
>ref|XP_004162331.1| PREDICTED: transcription initiation factor IIB-like [Cucumis
sativus]
Length = 443
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Frame = -2
Query: 212 STNIKEIAINKCFCTRRNPISIFAVATYLAMPI----RR*TEICKLTCLTKVFLAR 57
+T+I E+ INKCFCTRRNPISI A A YLA + + EICK+T LT+V L +
Sbjct: 251 ATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRK 306
>ref|XP_004143581.1| PREDICTED: transcription initiation factor IIB-like [Cucumis
sativus]
Length = 443
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Frame = -2
Query: 212 STNIKEIAINKCFCTRRNPISIFAVATYLAMPI----RR*TEICKLTCLTKVFLAR 57
+T+I E+ INKCFCTRRNPISI A A YLA + + EICK+T LT+V L +
Sbjct: 251 ATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRK 306
>gb|AEI98626.1| hypothetical protein 111O18.13 [Coffea canephora]
Length = 526
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Frame = -2
Query: 212 STNIKEIAINKCFCTRRNPISIFAVATYLAMPI----RR*TEICKLTCLTKVFLAR 57
+T+I E+ INKCFCTRRNPISI A A YLA + + EICK+T LT+V L +
Sbjct: 266 ATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRK 321
>ref|XP_002267728.1| PREDICTED: uncharacterized protein LOC100256546 [Vitis vinifera]
Length = 540
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Frame = -2
Query: 212 STNIKEIAINKCFCTRRNPISIFAVATYLAMPI----RR*TEICKLTCLTKVFLAR 57
+T+I E+ INKCFCTRRNPISI A A YLA + + EICK+T LT+V L +
Sbjct: 270 ATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRK 325
>ref|XP_002521582.1| RNA polymerase II transcription factor, putative [Ricinus communis]
gi|223539260|gb|EEF40853.1| RNA polymerase II
transcription factor, putative [Ricinus communis]
Length = 511
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Frame = -2
Query: 212 STNIKEIAINKCFCTRRNPISIFAVATYLAMPI----RR*TEICKLTCLTKVFLAR 57
+T+I E+ INKCFCTRRNPISI A A YLA + + EICK+T LT+V L +
Sbjct: 250 ATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRK 305