BLASTX nr result
ID: Cocculus23_contig00056417
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00056417
(256 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACP52039.1| photosystem I P700 chlorophyll a apoprotein A1 [P... 58 2e-06
gb|AFU96285.1| PsaA, partial (chloroplast) [Ixonanthes sp. CCD-2... 57 2e-06
sp|Q9MUJ1.1|PSAA_HUPSQ RecName: Full=Photosystem I P700 chloroph... 57 3e-06
ref|YP_008993975.1| photosystem I P700 chlorophyll a apoprotein ... 57 3e-06
gb|AAF65219.1| photosystem protein [Pisum sativum] 57 3e-06
sp|P05310.2|PSAA_PEA RecName: Full=Photosystem I P700 chlorophyl... 57 3e-06
gb|AFU96281.1| PsaA, partial (chloroplast) [Hypericum fraseri] 57 3e-06
pdb|3LW5|A Chain A, Improved Model Of Plant Photosystem I 57 3e-06
pdb|2O01|A Chain A, The Structure Of A Plant Photosystem I Super... 57 3e-06
gb|AGW45893.1| photosystem I P700 apoprotein A1 [Lens culinaris] 57 3e-06
gb|AGS43964.1| photosystem I P700 apoprotein A1 [Vicia faba] 57 3e-06
gb|AGO63799.1| photosystem I P700 apoprotein A1 [Trifolium aureum] 57 3e-06
gb|AGO63723.1| photosystem I P700 apoprotein A1 [Trifolium grand... 57 3e-06
ref|YP_009026440.1| photosystem I P700 chlorophyll a apoprotein ... 57 3e-06
gb|EYU35342.1| hypothetical protein MIMGU_mgv1a018545mg [Mimulus... 57 3e-06
gb|AHM91214.1| photosystem I P700 apoprotein A1, partial (chloro... 57 3e-06
gb|AHM91156.1| photosystem I P700 apoprotein A1, partial (chloro... 57 3e-06
gb|AHM91096.1| photosystem I P700 apoprotein A1 (chloroplast) [L... 57 3e-06
gb|AHM89385.1| photosystem I P700 apoprotein A1 (chloroplast) [L... 57 3e-06
gb|AHM88913.1| photosystem I P700 apoprotein A1 (chloroplast) [L... 57 3e-06
>gb|ACP52039.1| photosystem I P700 chlorophyll a apoprotein A1 [Pinus leiophylla
var. chihuahuana] gi|356996567|gb|AET44485.1|
photosystem I P700 chlorophyll a apoprotein A1
(chloroplast) [Pinus leiophylla var. chihuahuana]
Length = 753
Score = 57.8 bits (138), Expect = 2e-06
Identities = 30/41 (73%), Positives = 31/41 (75%)
Frame = +1
Query: 133 VATHTTRGNSAQSSITLVGGYFFFLWAQASQVIHSYGSSLS 255
V TH T GN AQSSIT+ G FLWAQASQVI SYGSSLS
Sbjct: 628 VVTHITGGNFAQSSITINGXXXDFLWAQASQVIQSYGSSLS 668
>gb|AFU96285.1| PsaA, partial (chloroplast) [Ixonanthes sp. CCD-2012]
Length = 758
Score = 56.6 bits (135), Expect(2) = 2e-06
Identities = 30/41 (73%), Positives = 31/41 (75%)
Frame = +1
Query: 133 VATHTTRGNSAQSSITLVGGYFFFLWAQASQVIHSYGSSLS 255
V TH T GN AQSSIT+ G FLWAQASQVI SYGSSLS
Sbjct: 633 VVTHITGGNFAQSSITINGWLRDFLWAQASQVIQSYGSSLS 673
Score = 20.4 bits (41), Expect(2) = 2e-06
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2
Query: 95 MQSNA*GNINGHGL 136
MQS+ G+ING G+
Sbjct: 620 MQSDVWGSINGQGV 633
>sp|Q9MUJ1.1|PSAA_HUPSQ RecName: Full=Photosystem I P700 chlorophyll a apoprotein A1;
AltName: Full=PSI-A; AltName: Full=PsaA
gi|6856200|gb|AAF29825.1| photosystem I P700 apoprotein
A1 [Huperzia squarrosa]
Length = 715
Score = 57.0 bits (136), Expect = 3e-06
Identities = 29/42 (69%), Positives = 32/42 (76%)
Frame = +1
Query: 130 RVATHTTRGNSAQSSITLVGGYFFFLWAQASQVIHSYGSSLS 255
++ TH T GN AQSSIT+ G FLWAQASQVI SYGSSLS
Sbjct: 614 KIVTHITGGNFAQSSITINGWLRDFLWAQASQVIQSYGSSLS 655
>ref|YP_008993975.1| photosystem I P700 chlorophyll a apoprotein A1 (chloroplast)
[Pharus lappulaceus] gi|449020259|gb|AGE65756.1|
photosystem I P700 chlorophyll a apoprotein A1
(chloroplast) [Pharus lappulaceus]
Length = 750
Score = 57.0 bits (136), Expect = 3e-06
Identities = 30/41 (73%), Positives = 31/41 (75%)
Frame = +1
Query: 133 VATHTTRGNSAQSSITLVGGYFFFLWAQASQVIHSYGSSLS 255
V TH T GN AQSSIT+ G FLWAQASQVI SYGSSLS
Sbjct: 625 VVTHVTGGNFAQSSITINGWLRDFLWAQASQVIQSYGSSLS 665
>gb|AAF65219.1| photosystem protein [Pisum sativum]
Length = 719
Score = 57.0 bits (136), Expect = 3e-06
Identities = 30/41 (73%), Positives = 31/41 (75%)
Frame = +1
Query: 133 VATHTTRGNSAQSSITLVGGYFFFLWAQASQVIHSYGSSLS 255
V TH T GN AQSSIT+ G FLWAQASQVI SYGSSLS
Sbjct: 615 VVTHITAGNFAQSSITINGWLRDFLWAQASQVIQSYGSSLS 655
>sp|P05310.2|PSAA_PEA RecName: Full=Photosystem I P700 chlorophyll a apoprotein A1;
AltName: Full=PSI-A; AltName: Full=PsaA
gi|268612144|pdb|2WSC|A Chain A, Improved Model Of Plant
Photosystem I gi|268612162|pdb|2WSE|A Chain A, Improved
Model Of Plant Photosystem I gi|268612180|pdb|2WSF|A
Chain A, Improved Model Of Plant Photosystem I
Length = 758
Score = 57.0 bits (136), Expect = 3e-06
Identities = 30/41 (73%), Positives = 31/41 (75%)
Frame = +1
Query: 133 VATHTTRGNSAQSSITLVGGYFFFLWAQASQVIHSYGSSLS 255
V TH T GN AQSSIT+ G FLWAQASQVI SYGSSLS
Sbjct: 633 VVTHITAGNFAQSSITINGWLRDFLWAQASQVIQSYGSSLS 673
>gb|AFU96281.1| PsaA, partial (chloroplast) [Hypericum fraseri]
Length = 758
Score = 57.0 bits (136), Expect = 3e-06
Identities = 30/41 (73%), Positives = 31/41 (75%)
Frame = +1
Query: 133 VATHTTRGNSAQSSITLVGGYFFFLWAQASQVIHSYGSSLS 255
V TH T GN AQSSIT+ G FLWAQASQVI SYGSSLS
Sbjct: 633 VVTHITAGNFAQSSITINGWLRDFLWAQASQVIQSYGSSLS 673
>pdb|3LW5|A Chain A, Improved Model Of Plant Photosystem I
Length = 738
Score = 57.0 bits (136), Expect = 3e-06
Identities = 30/41 (73%), Positives = 31/41 (75%)
Frame = +1
Query: 133 VATHTTRGNSAQSSITLVGGYFFFLWAQASQVIHSYGSSLS 255
V TH T GN AQSSIT+ G FLWAQASQVI SYGSSLS
Sbjct: 613 VVTHITAGNFAQSSITINGWLRDFLWAQASQVIQSYGSSLS 653
>pdb|2O01|A Chain A, The Structure Of A Plant Photosystem I Supercomplex At 3.4
Angstrom Resolution
Length = 754
Score = 57.0 bits (136), Expect = 3e-06
Identities = 30/41 (73%), Positives = 31/41 (75%)
Frame = +1
Query: 133 VATHTTRGNSAQSSITLVGGYFFFLWAQASQVIHSYGSSLS 255
V TH T GN AQSSIT+ G FLWAQASQVI SYGSSLS
Sbjct: 629 VVTHITAGNFAQSSITINGWLRDFLWAQASQVIQSYGSSLS 669
>gb|AGW45893.1| photosystem I P700 apoprotein A1 [Lens culinaris]
Length = 758
Score = 56.6 bits (135), Expect = 3e-06
Identities = 30/41 (73%), Positives = 31/41 (75%)
Frame = +1
Query: 133 VATHTTRGNSAQSSITLVGGYFFFLWAQASQVIHSYGSSLS 255
V TH T GN AQSSIT+ G FLWAQASQVI SYGSSLS
Sbjct: 633 VVTHITGGNFAQSSITINGWLRDFLWAQASQVIQSYGSSLS 673
>gb|AGS43964.1| photosystem I P700 apoprotein A1 [Vicia faba]
Length = 758
Score = 56.6 bits (135), Expect = 3e-06
Identities = 30/41 (73%), Positives = 31/41 (75%)
Frame = +1
Query: 133 VATHTTRGNSAQSSITLVGGYFFFLWAQASQVIHSYGSSLS 255
V TH T GN AQSSIT+ G FLWAQASQVI SYGSSLS
Sbjct: 633 VVTHITGGNFAQSSITINGWLRDFLWAQASQVIQSYGSSLS 673
>gb|AGO63799.1| photosystem I P700 apoprotein A1 [Trifolium aureum]
Length = 750
Score = 56.6 bits (135), Expect = 3e-06
Identities = 30/41 (73%), Positives = 31/41 (75%)
Frame = +1
Query: 133 VATHTTRGNSAQSSITLVGGYFFFLWAQASQVIHSYGSSLS 255
V TH T GN AQSSIT+ G FLWAQASQVI SYGSSLS
Sbjct: 625 VVTHITGGNFAQSSITINGWLRDFLWAQASQVIQSYGSSLS 665
>gb|AGO63723.1| photosystem I P700 apoprotein A1 [Trifolium grandiflorum]
Length = 750
Score = 56.6 bits (135), Expect = 3e-06
Identities = 30/41 (73%), Positives = 31/41 (75%)
Frame = +1
Query: 133 VATHTTRGNSAQSSITLVGGYFFFLWAQASQVIHSYGSSLS 255
V TH T GN AQSSIT+ G FLWAQASQVI SYGSSLS
Sbjct: 625 VVTHITGGNFAQSSITINGWLRDFLWAQASQVIQSYGSSLS 665
>ref|YP_009026440.1| photosystem I P700 chlorophyll a apoprotein A1 (chloroplast)
[Dendrobium officinale] gi|507474325|gb|AGM48201.1|
photosystem I P700 chlorophyll a apoprotein A1
(chloroplast) [Dendrobium officinale]
Length = 750
Score = 56.6 bits (135), Expect = 3e-06
Identities = 30/41 (73%), Positives = 31/41 (75%)
Frame = +1
Query: 133 VATHTTRGNSAQSSITLVGGYFFFLWAQASQVIHSYGSSLS 255
V TH T GN AQSSIT+ G FLWAQASQVI SYGSSLS
Sbjct: 625 VVTHITGGNFAQSSITINGWLRDFLWAQASQVIQSYGSSLS 665
>gb|EYU35342.1| hypothetical protein MIMGU_mgv1a018545mg [Mimulus guttatus]
Length = 750
Score = 56.6 bits (135), Expect = 3e-06
Identities = 30/41 (73%), Positives = 31/41 (75%)
Frame = +1
Query: 133 VATHTTRGNSAQSSITLVGGYFFFLWAQASQVIHSYGSSLS 255
V TH T GN AQSSIT+ G FLWAQASQVI SYGSSLS
Sbjct: 625 VVTHITGGNFAQSSITINGWLRDFLWAQASQVIQSYGSSLS 665
>gb|AHM91214.1| photosystem I P700 apoprotein A1, partial (chloroplast) [Lagenaria
siceraria]
Length = 746
Score = 56.6 bits (135), Expect = 3e-06
Identities = 30/41 (73%), Positives = 31/41 (75%)
Frame = +1
Query: 133 VATHTTRGNSAQSSITLVGGYFFFLWAQASQVIHSYGSSLS 255
V TH T GN AQSSIT+ G FLWAQASQVI SYGSSLS
Sbjct: 625 VVTHITGGNFAQSSITINGWLRDFLWAQASQVIQSYGSSLS 665
>gb|AHM91156.1| photosystem I P700 apoprotein A1, partial (chloroplast) [Lagenaria
siceraria]
Length = 766
Score = 56.6 bits (135), Expect = 3e-06
Identities = 30/41 (73%), Positives = 31/41 (75%)
Frame = +1
Query: 133 VATHTTRGNSAQSSITLVGGYFFFLWAQASQVIHSYGSSLS 255
V TH T GN AQSSIT+ G FLWAQASQVI SYGSSLS
Sbjct: 625 VVTHITGGNFAQSSITINGWLRDFLWAQASQVIQSYGSSLS 665
>gb|AHM91096.1| photosystem I P700 apoprotein A1 (chloroplast) [Lagenaria
siceraria]
Length = 750
Score = 56.6 bits (135), Expect = 3e-06
Identities = 30/41 (73%), Positives = 31/41 (75%)
Frame = +1
Query: 133 VATHTTRGNSAQSSITLVGGYFFFLWAQASQVIHSYGSSLS 255
V TH T GN AQSSIT+ G FLWAQASQVI SYGSSLS
Sbjct: 625 VVTHITGGNFAQSSITINGWLRDFLWAQASQVIQSYGSSLS 665
>gb|AHM89385.1| photosystem I P700 apoprotein A1 (chloroplast) [Lagenaria
siceraria]
Length = 750
Score = 56.6 bits (135), Expect = 3e-06
Identities = 30/41 (73%), Positives = 31/41 (75%)
Frame = +1
Query: 133 VATHTTRGNSAQSSITLVGGYFFFLWAQASQVIHSYGSSLS 255
V TH T GN AQSSIT+ G FLWAQASQVI SYGSSLS
Sbjct: 625 VVTHITGGNFAQSSITINGWLRDFLWAQASQVIQSYGSSLS 665
>gb|AHM88913.1| photosystem I P700 apoprotein A1 (chloroplast) [Lagenaria
siceraria]
Length = 750
Score = 56.6 bits (135), Expect = 3e-06
Identities = 30/41 (73%), Positives = 31/41 (75%)
Frame = +1
Query: 133 VATHTTRGNSAQSSITLVGGYFFFLWAQASQVIHSYGSSLS 255
V TH T GN AQSSIT+ G FLWAQASQVI SYGSSLS
Sbjct: 625 VVTHITGGNFAQSSITINGWLRDFLWAQASQVIQSYGSSLS 665