BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00056407
         (359 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007204448.1| hypothetical protein PRUPE_ppa026467mg [Prun...   142   5e-32
ref|XP_007139632.1| hypothetical protein PHAVU_008G046100g [Phas...   142   6e-32
ref|XP_006397667.1| hypothetical protein EUTSA_v10001725mg [Eutr...   141   8e-32
ref|XP_004489099.1| PREDICTED: pentatricopeptide repeat-containi...   139   4e-31
ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containi...   138   7e-31
ref|XP_006293876.1| hypothetical protein CARUB_v10022861mg [Caps...   138   9e-31
ref|XP_004231149.1| PREDICTED: pentatricopeptide repeat-containi...   138   9e-31
ref|XP_002511599.1| pentatricopeptide repeat-containing protein,...   138   9e-31
ref|XP_002880144.1| pentatricopeptide repeat-containing protein ...   137   2e-30
ref|XP_006347950.1| PREDICTED: pentatricopeptide repeat-containi...   136   3e-30
gb|ABE65907.1| pentatricopeptide repeat-containing protein [Arab...   136   3e-30
ref|NP_182015.1| Pentatricopeptide repeat-containing protein [Ar...   136   3e-30
ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containi...   136   3e-30
emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]   136   3e-30
gb|EXB37620.1| hypothetical protein L484_021826 [Morus notabilis]     134   1e-29
ref|XP_007203920.1| hypothetical protein PRUPE_ppa015039mg, part...   134   1e-29
ref|XP_007052292.1| Pentatricopeptide repeat superfamily protein...   134   1e-29
ref|XP_003620999.1| Pentatricopeptide repeat-containing protein ...   131   1e-28
ref|XP_004308509.1| PREDICTED: pentatricopeptide repeat-containi...   130   2e-28
gb|EPS68042.1| hypothetical protein M569_06731, partial [Genlise...   124   1e-26

>ref|XP_007204448.1| hypothetical protein PRUPE_ppa026467mg [Prunus persica]
           gi|462399979|gb|EMJ05647.1| hypothetical protein
           PRUPE_ppa026467mg [Prunus persica]
          Length = 508

 Score =  142 bits (358), Expect = 5e-32
 Identities = 67/118 (56%), Positives = 89/118 (75%)
 Frame = +3

Query: 6   FFPDSYTFPSLLKSCGYNLAFREGHQLHGQVVQMGFFSDLFVSTVLVDVYAKFRDMESAR 185
           F PD YTF +L KSCG ++A  EG +LH  V+++G   DL+VST LVD+YAKF  M  A 
Sbjct: 84  FKPDGYTFTALAKSCGLDVAIWEGQELHCHVIKVGLCLDLYVSTSLVDMYAKFGSMSCAS 143

Query: 186 RVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMPEKDIVAFNAMIDAYVKSGNI 359
           ++F+EM + SR+SWTA+I GY+RLG+   ++ LFDQMPEKD+ AFNAMID YVK G++
Sbjct: 144 KLFNEMTETSRLSWTALICGYARLGDMGNARRLFDQMPEKDLAAFNAMIDGYVKLGDM 201



 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 31/74 (41%), Positives = 46/74 (62%)
 Frame = +3

Query: 120 DLFVSTVLVDVYAKFRDMESARRVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMP 299
           DL     ++D Y K  DM  AR +FDEM  R+ VSWT+++ GY   G+   ++ LFD M 
Sbjct: 184 DLAAFNAMIDGYVKLGDMGPARSLFDEMTDRNVVSWTSMMYGYCHHGDVQSARSLFDAMA 243

Query: 300 EKDIVAFNAMIDAY 341
           EK+++++N MI  Y
Sbjct: 244 EKNLISWNVMIGGY 257


>ref|XP_007139632.1| hypothetical protein PHAVU_008G046100g [Phaseolus vulgaris]
           gi|561012765|gb|ESW11626.1| hypothetical protein
           PHAVU_008G046100g [Phaseolus vulgaris]
          Length = 602

 Score =  142 bits (357), Expect = 6e-32
 Identities = 67/116 (57%), Positives = 88/116 (75%)
 Frame = +3

Query: 6   FFPDSYTFPSLLKSCGYNLAFREGHQLHGQVVQMGFFSDLFVSTVLVDVYAKFRDMESAR 185
           F PD YTF +L+K C   +A REG QLHG V++ G   DL+V+T LVD+Y KF  ++SA+
Sbjct: 123 FTPDGYTFTALVKGCSARVATREGPQLHGVVLRNGVCFDLYVATALVDMYVKFGVLDSAK 182

Query: 186 RVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMPEKDIVAFNAMIDAYVKSG 353
           +VFDEM  RSRVSWTAVIVGY+R G+   ++ LFD+M ++D+VAFNAMID Y K+G
Sbjct: 183 KVFDEMSVRSRVSWTAVIVGYARCGDMGEARRLFDEMEDRDVVAFNAMIDGYAKTG 238


>ref|XP_006397667.1| hypothetical protein EUTSA_v10001725mg [Eutrema salsugineum]
           gi|557098740|gb|ESQ39120.1| hypothetical protein
           EUTSA_v10001725mg [Eutrema salsugineum]
          Length = 644

 Score =  141 bits (356), Expect = 8e-32
 Identities = 67/120 (55%), Positives = 91/120 (75%), Gaps = 1/120 (0%)
 Frame = +3

Query: 3   CFFPDSYTFPSLLKSCGYNLAFREGHQLHGQVVQMGFFSDLFVSTVLVDVYAKFRDMESA 182
           CF PD++TF +L KSC  ++   +G QLHGQ+ + GF +D++VST +VD+YAKF  M  A
Sbjct: 73  CFAPDNFTFTTLTKSCTLSMCVYQGLQLHGQIWRSGFCADMYVSTGVVDMYAKFGKMGCA 132

Query: 183 RRVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMPE-KDIVAFNAMIDAYVKSGNI 359
           R VFDEMPQRS VSWTA+I GY+R G   ++ +LFD+MP+ KD+V  NAM+D YVKSG++
Sbjct: 133 RNVFDEMPQRSEVSWTALICGYARCGELQVASKLFDEMPQVKDVVICNAMMDGYVKSGDM 192



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 31/83 (37%), Positives = 53/83 (63%)
 Frame = +3

Query: 102 QMGFFSDLFVSTVLVDVYAKFRDMESARRVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKE 281
           +M    D+ +   ++D Y K  DM SARR+FDEM  ++ ++WT +I GY    +   ++E
Sbjct: 169 EMPQVKDVVICNAMMDGYVKSGDMTSARRLFDEMTDKTVITWTTMIRGYCNNRDIESARE 228

Query: 282 LFDQMPEKDIVAFNAMIDAYVKS 350
           LFD MP++++V++N MI  Y ++
Sbjct: 229 LFDAMPQRNLVSWNTMIGGYCQN 251



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 31/92 (33%), Positives = 49/92 (53%)
 Frame = +3

Query: 12  PDSYTFPSLLKSCGYNLAFREGHQLHGQVVQMGFFSDLFVSTVLVDVYAKFRDMESARRV 191
           PD  T  S+L +     A   G   H  V +      + V T ++D+Y+K  ++E AR++
Sbjct: 272 PDDVTVVSVLPAISDTGALSLGEWCHHFVQRKKLDKMVKVCTAILDMYSKCGEIEKARKI 331

Query: 192 FDEMPQRSRVSWTAVIVGYSRLGNTSMSKELF 287
           FDEMP++   SW A+I G +  GN   + +LF
Sbjct: 332 FDEMPEKEVASWNAMIHGSALNGNARAALDLF 363


>ref|XP_004489099.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g44880-like [Cicer arietinum]
          Length = 600

 Score =  139 bits (350), Expect = 4e-31
 Identities = 69/116 (59%), Positives = 87/116 (75%)
 Frame = +3

Query: 6   FFPDSYTFPSLLKSCGYNLAFREGHQLHGQVVQMGFFSDLFVSTVLVDVYAKFRDMESAR 185
           F P SYTF  +LK CG  +A REG ++H  V++ GF +DL+V T LVD+Y KF  + SAR
Sbjct: 120 FVPSSYTFNLVLKGCGVCMALREGLEVHCVVLKNGFCADLYVGTSLVDMYVKFGFLGSAR 179

Query: 186 RVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMPEKDIVAFNAMIDAYVKSG 353
           +VFDEM  RS VSWTAVIVGY+R G+ S +++LFD MP++DI AFNAMID YVK G
Sbjct: 180 KVFDEMSVRSLVSWTAVIVGYARCGDMSEARKLFDVMPDRDIAAFNAMIDGYVKMG 235


>ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g44880-like [Glycine max]
          Length = 599

 Score =  138 bits (348), Expect = 7e-31
 Identities = 68/116 (58%), Positives = 86/116 (74%)
 Frame = +3

Query: 6   FFPDSYTFPSLLKSCGYNLAFREGHQLHGQVVQMGFFSDLFVSTVLVDVYAKFRDMESAR 185
           F PD YTF +L+K C   +A  EG  LHG V++ G   DL+V+T LVD+Y KF  + SAR
Sbjct: 121 FTPDGYTFTALVKGCATRVATGEGTLLHGMVLKNGVCFDLYVATALVDMYVKFGVLGSAR 180

Query: 186 RVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMPEKDIVAFNAMIDAYVKSG 353
           +VFDEM  RS+VSWTAVIVGY+R G+ S ++ LFD+M ++DIVAFNAMID YVK G
Sbjct: 181 KVFDEMSVRSKVSWTAVIVGYARCGDMSEARRLFDEMEDRDIVAFNAMIDGYVKMG 236


>ref|XP_006293876.1| hypothetical protein CARUB_v10022861mg [Capsella rubella]
           gi|565472150|ref|XP_006293877.1| hypothetical protein
           CARUB_v10022861mg [Capsella rubella]
           gi|482562584|gb|EOA26774.1| hypothetical protein
           CARUB_v10022861mg [Capsella rubella]
           gi|482562585|gb|EOA26775.1| hypothetical protein
           CARUB_v10022861mg [Capsella rubella]
          Length = 596

 Score =  138 bits (347), Expect = 9e-31
 Identities = 66/120 (55%), Positives = 88/120 (73%), Gaps = 1/120 (0%)
 Frame = +3

Query: 3   CFFPDSYTFPSLLKSCGYNLAFREGHQLHGQVVQMGFFSDLFVSTVLVDVYAKFRDMESA 182
           CF PD++TF +L KSC  +L   +G QLH Q+ + GF +D++VST +VD+YAKF  M  A
Sbjct: 114 CFAPDNFTFTTLTKSCTLSLCVYQGLQLHSQIWRSGFCADMYVSTGVVDMYAKFGKMGCA 173

Query: 183 RRVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMPE-KDIVAFNAMIDAYVKSGNI 359
           R VFDEMPQRS VSWTA+I GY R G   ++ +LFD+MP  KD+V +NAM+D YVK G++
Sbjct: 174 RNVFDEMPQRSEVSWTALICGYVRCGELDLASKLFDEMPHVKDVVIYNAMMDGYVKFGDM 233



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 32/83 (38%), Positives = 54/83 (65%)
 Frame = +3

Query: 102 QMGFFSDLFVSTVLVDVYAKFRDMESARRVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKE 281
           +M    D+ +   ++D Y KF DM SARR+FDEM  ++ ++WT +I GYS   +   +++
Sbjct: 210 EMPHVKDVVIYNAMMDGYVKFGDMTSARRLFDEMTYKTVITWTTMIHGYSNNKDIESARQ 269

Query: 282 LFDQMPEKDIVAFNAMIDAYVKS 350
           LFD M E+++V++N MI  Y ++
Sbjct: 270 LFDAMAERNLVSWNTMIGGYCQN 292


>ref|XP_004231149.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g44880-like [Solanum lycopersicum]
          Length = 605

 Score =  138 bits (347), Expect = 9e-31
 Identities = 67/118 (56%), Positives = 86/118 (72%)
 Frame = +3

Query: 6   FFPDSYTFPSLLKSCGYNLAFREGHQLHGQVVQMGFFSDLFVSTVLVDVYAKFRDMESAR 185
           F PD+YT  SL K CG  L   EG ++H  V++ GF S+LFV+T LVD+Y KF +M  AR
Sbjct: 115 FKPDNYTLSSLSKCCGARLVLLEGLEIHNHVLKCGFASNLFVATSLVDMYGKFGEMAFAR 174

Query: 186 RVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMPEKDIVAFNAMIDAYVKSGNI 359
           ++FDEMPQRS VSWTA+I GY +   T +++ LFD MPEKD+ AFN MIDAYVK G++
Sbjct: 175 KLFDEMPQRSPVSWTALIGGYLKCRCTGIAEGLFDAMPEKDVAAFNVMIDAYVKKGDM 232



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 33/77 (42%), Positives = 52/77 (67%)
 Frame = +3

Query: 120 DLFVSTVLVDVYAKFRDMESARRVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMP 299
           D+    V++D Y K  DM SA R+F  MP+R+ +SWT++I G+   GN S +K LFD MP
Sbjct: 215 DVAAFNVMIDAYVKKGDMLSANRLFWAMPERNVISWTSMIDGHCSNGNVSEAKALFDVMP 274

Query: 300 EKDIVAFNAMIDAYVKS 350
           ++++ ++NAMI  Y ++
Sbjct: 275 QRNLFSWNAMIGGYCQN 291


>ref|XP_002511599.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548779|gb|EEF50268.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 429

 Score =  138 bits (347), Expect = 9e-31
 Identities = 65/118 (55%), Positives = 89/118 (75%)
 Frame = +3

Query: 6   FFPDSYTFPSLLKSCGYNLAFREGHQLHGQVVQMGFFSDLFVSTVLVDVYAKFRDMESAR 185
           F PD++TF +L KSCG N+A  EG ++H  V++MGF  DL+VST LVD+YAKF ++  AR
Sbjct: 84  FLPDNFTFTALAKSCGLNMAVWEGFEIHNHVLKMGFGLDLYVSTALVDMYAKFGELCMAR 143

Query: 186 RVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMPEKDIVAFNAMIDAYVKSGNI 359
           ++FDEM +R  VSWTA+I G  R G+   ++ LFDQMPEKD  A+NAM+D YVK+G++
Sbjct: 144 KMFDEMAERGVVSWTALIGGCMRSGDMGNARILFDQMPEKDSAAYNAMLDGYVKAGDM 201



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 31/67 (46%), Positives = 48/67 (71%)
 Frame = +3

Query: 141 LVDVYAKFRDMESARRVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMPEKDIVAF 320
           ++D Y K  DMESA+ +FD+MP R+ +SWT++I GY   G+   ++ LFD MPE+++ ++
Sbjct: 191 MLDGYVKAGDMESAQSLFDKMPARNVISWTSMIYGYCSGGDVLTARSLFDAMPERNLFSW 250

Query: 321 NAMIDAY 341
           NAMI  Y
Sbjct: 251 NAMIGGY 257


>ref|XP_002880144.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325983|gb|EFH56403.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 555

 Score =  137 bits (345), Expect = 2e-30
 Identities = 64/120 (53%), Positives = 89/120 (74%), Gaps = 1/120 (0%)
 Frame = +3

Query: 3   CFFPDSYTFPSLLKSCGYNLAFREGHQLHGQVVQMGFFSDLFVSTVLVDVYAKFRDMESA 182
           C  PD++TF ++ KSC  ++   +G QLH Q+ + GF +D++VST +VD+YAKF  M  A
Sbjct: 73  CLAPDNFTFTTMTKSCTLSMCVYQGLQLHSQIWRSGFCADMYVSTGVVDMYAKFGKMGCA 132

Query: 183 RRVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMPE-KDIVAFNAMIDAYVKSGNI 359
           R VFDEMPQRS VSWTA+I GY R G   ++ +LFDQMP+ KD+V +NAM+D +VKSG++
Sbjct: 133 RNVFDEMPQRSEVSWTALICGYVRFGELDLASKLFDQMPQVKDVVIYNAMMDGFVKSGDM 192



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 36/101 (35%), Positives = 59/101 (58%)
 Frame = +3

Query: 48  CGYNLAFREGHQLHGQVVQMGFFSDLFVSTVLVDVYAKFRDMESARRVFDEMPQRSRVSW 227
           CGY + F E         QM    D+ +   ++D + K  DM SARR+FDEM  ++ ++W
Sbjct: 152 CGY-VRFGELDLASKLFDQMPQVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITW 210

Query: 228 TAVIVGYSRLGNTSMSKELFDQMPEKDIVAFNAMIDAYVKS 350
           T +I GY    +   +++LFD MPE+++V++N MI  Y ++
Sbjct: 211 TTMIHGYCNSNDIDSARKLFDAMPERNLVSWNTMIGGYCQN 251



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 33/99 (33%), Positives = 54/99 (54%)
 Frame = +3

Query: 12  PDSYTFPSLLKSCGYNLAFREGHQLHGQVVQMGFFSDLFVSTVLVDVYAKFRDMESARRV 191
           PD  T  S+L +     A   G   H  V +      + V T ++D+Y+K  ++E A+R+
Sbjct: 272 PDDVTILSVLPAISDTGALSLGEWCHCFVQRKNLDKKVKVCTAILDMYSKCGEIEKAKRI 331

Query: 192 FDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMPEKD 308
           FDEMP++   SW A+I GY+  GN   + +LF  M +++
Sbjct: 332 FDEMPEKQVASWNAMIHGYALNGNAHAALDLFLTMAKEE 370


>ref|XP_006347950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g44880-like [Solanum tuberosum]
          Length = 603

 Score =  136 bits (343), Expect = 3e-30
 Identities = 66/118 (55%), Positives = 86/118 (72%)
 Frame = +3

Query: 6   FFPDSYTFPSLLKSCGYNLAFREGHQLHGQVVQMGFFSDLFVSTVLVDVYAKFRDMESAR 185
           F PD+YT  SL K CG  L   EG ++H  V++ GF S+LFV+T LVD+Y KF +M+ AR
Sbjct: 113 FKPDNYTLSSLSKCCGARLVLWEGLEIHNHVLKCGFASNLFVATSLVDMYGKFGEMDFAR 172

Query: 186 RVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMPEKDIVAFNAMIDAYVKSGNI 359
           ++FDEMPQRS VSWTA+I GY +     +++ LFD MPEKD+ AFN MIDAYVK G++
Sbjct: 173 KLFDEMPQRSPVSWTALIGGYLKCRCMGIAEGLFDAMPEKDVAAFNVMIDAYVKKGDM 230



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 32/77 (41%), Positives = 52/77 (67%)
 Frame = +3

Query: 120 DLFVSTVLVDVYAKFRDMESARRVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMP 299
           D+    V++D Y K  DM SA R+F  MP+R+ +SWT++I G+   GN S ++ LFD MP
Sbjct: 213 DVAAFNVMIDAYVKKGDMLSANRLFWAMPERNVISWTSMIDGHCSNGNVSEARVLFDVMP 272

Query: 300 EKDIVAFNAMIDAYVKS 350
           ++++ ++NAMI  Y ++
Sbjct: 273 QRNLYSWNAMIGGYCQN 289


>gb|ABE65907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 555

 Score =  136 bits (343), Expect = 3e-30
 Identities = 64/120 (53%), Positives = 87/120 (72%), Gaps = 1/120 (0%)
 Frame = +3

Query: 3   CFFPDSYTFPSLLKSCGYNLAFREGHQLHGQVVQMGFFSDLFVSTVLVDVYAKFRDMESA 182
           CF PD++TF +L KSC  ++   +G QLH Q+ + GF +D++VST +VD+YAKF  M  A
Sbjct: 73  CFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCA 132

Query: 183 RRVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMPE-KDIVAFNAMIDAYVKSGNI 359
           R  FDEMP RS VSWTA+I GY R G   ++ +LFDQMP  KD+V +NAM+D +VKSG++
Sbjct: 133 RNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDM 192



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 31/83 (37%), Positives = 54/83 (65%)
 Frame = +3

Query: 102 QMGFFSDLFVSTVLVDVYAKFRDMESARRVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKE 281
           QM    D+ +   ++D + K  DM SARR+FDEM  ++ ++WT +I GY  + +   +++
Sbjct: 169 QMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARK 228

Query: 282 LFDQMPEKDIVAFNAMIDAYVKS 350
           LFD MPE+++V++N MI  Y ++
Sbjct: 229 LFDAMPERNLVSWNTMIGGYCQN 251



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 33/95 (34%), Positives = 51/95 (53%)
 Frame = +3

Query: 12  PDSYTFPSLLKSCGYNLAFREGHQLHGQVVQMGFFSDLFVSTVLVDVYAKFRDMESARRV 191
           PD  T  S+L +     A   G   H  V +      + V T ++D+Y+K  ++E A+R+
Sbjct: 272 PDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRI 331

Query: 192 FDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQM 296
           FDEMP++   SW A+I GY+  GN   + +LF  M
Sbjct: 332 FDEMPEKQVASWNAMIHGYALNGNARAALDLFVTM 366


>ref|NP_182015.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546766|sp|Q1PEU4.2|PP201_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g44880 gi|2344896|gb|AAC31836.1| hypothetical protein
           [Arabidopsis thaliana] gi|330255385|gb|AEC10479.1|
           Pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 555

 Score =  136 bits (343), Expect = 3e-30
 Identities = 64/120 (53%), Positives = 87/120 (72%), Gaps = 1/120 (0%)
 Frame = +3

Query: 3   CFFPDSYTFPSLLKSCGYNLAFREGHQLHGQVVQMGFFSDLFVSTVLVDVYAKFRDMESA 182
           CF PD++TF +L KSC  ++   +G QLH Q+ + GF +D++VST +VD+YAKF  M  A
Sbjct: 73  CFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCA 132

Query: 183 RRVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMPE-KDIVAFNAMIDAYVKSGNI 359
           R  FDEMP RS VSWTA+I GY R G   ++ +LFDQMP  KD+V +NAM+D +VKSG++
Sbjct: 133 RNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDM 192



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 31/83 (37%), Positives = 54/83 (65%)
 Frame = +3

Query: 102 QMGFFSDLFVSTVLVDVYAKFRDMESARRVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKE 281
           QM    D+ +   ++D + K  DM SARR+FDEM  ++ ++WT +I GY  + +   +++
Sbjct: 169 QMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARK 228

Query: 282 LFDQMPEKDIVAFNAMIDAYVKS 350
           LFD MPE+++V++N MI  Y ++
Sbjct: 229 LFDAMPERNLVSWNTMIGGYCQN 251



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 33/95 (34%), Positives = 51/95 (53%)
 Frame = +3

Query: 12  PDSYTFPSLLKSCGYNLAFREGHQLHGQVVQMGFFSDLFVSTVLVDVYAKFRDMESARRV 191
           PD  T  S+L +     A   G   H  V +      + V T ++D+Y+K  ++E A+R+
Sbjct: 272 PDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRI 331

Query: 192 FDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQM 296
           FDEMP++   SW A+I GY+  GN   + +LF  M
Sbjct: 332 FDEMPEKQVASWNAMIHGYALNGNARAALDLFVTM 366


>ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
           [Vitis vinifera] gi|297734603|emb|CBI16654.3| unnamed
           protein product [Vitis vinifera]
          Length = 577

 Score =  136 bits (342), Expect = 3e-30
 Identities = 67/118 (56%), Positives = 85/118 (72%)
 Frame = +3

Query: 6   FFPDSYTFPSLLKSCGYNLAFREGHQLHGQVVQMGFFSDLFVSTVLVDVYAKFRDMESAR 185
           F PDS+TF  L KSC  N+A  EG ++H  VV +GF  DL+ +T LVD+YAKF  M+ AR
Sbjct: 84  FTPDSFTFSVLAKSCALNMAIWEGQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCAR 143

Query: 186 RVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMPEKDIVAFNAMIDAYVKSGNI 359
           ++FDEM  RS+VSWTA+I GY R G+   + +LFDQM EKD  AFN MIDAYVK G++
Sbjct: 144 KLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQMIEKDSAAFNTMIDAYVKLGDM 201



 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 39/84 (46%), Positives = 53/84 (63%)
 Frame = +3

Query: 90  GQVVQMGFFSDLFVSTVLVDVYAKFRDMESARRVFDEMPQRSRVSWTAVIVGYSRLGNTS 269
           G++       D      ++D Y K  DM SAR++FDEMP+RS VSWT +I GYS  GN  
Sbjct: 174 GKLFDQMIEKDSAAFNTMIDAYVKLGDMCSARKLFDEMPERSVVSWTIMIYGYSSNGNLD 233

Query: 270 MSKELFDQMPEKDIVAFNAMIDAY 341
            ++ LFD MPEK++ ++NAMI  Y
Sbjct: 234 SARSLFDAMPEKNLFSWNAMISGY 257


>emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
          Length = 751

 Score =  136 bits (342), Expect = 3e-30
 Identities = 67/118 (56%), Positives = 85/118 (72%)
 Frame = +3

Query: 6   FFPDSYTFPSLLKSCGYNLAFREGHQLHGQVVQMGFFSDLFVSTVLVDVYAKFRDMESAR 185
           F PDS+TF  L KSC  N+A  EG ++H  VV +GF  DL+ +T LVD+YAKF  M+ AR
Sbjct: 258 FTPDSFTFSVLAKSCALNMAIWEGQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCAR 317

Query: 186 RVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMPEKDIVAFNAMIDAYVKSGNI 359
           ++FDEM  RS+VSWTA+I GY R G+   + +LFDQM EKD  AFN MIDAYVK G++
Sbjct: 318 KLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQMIEKDSAAFNTMIDAYVKLGDM 375



 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 39/87 (44%), Positives = 55/87 (63%)
 Frame = +3

Query: 90  GQVVQMGFFSDLFVSTVLVDVYAKFRDMESARRVFDEMPQRSRVSWTAVIVGYSRLGNTS 269
           G++       D      ++D Y K  DM SAR++FDEMP+RS VSWT +I GYS  GN  
Sbjct: 348 GKLFDQMIEKDSAAFNTMIDAYVKLGDMCSARKLFDEMPERSVVSWTIMIYGYSSNGNLD 407

Query: 270 MSKELFDQMPEKDIVAFNAMIDAYVKS 350
            ++ LFD MPEK++ ++NAMI  Y ++
Sbjct: 408 SARSLFDAMPEKNLFSWNAMISGYXQN 434


>gb|EXB37620.1| hypothetical protein L484_021826 [Morus notabilis]
          Length = 594

 Score =  134 bits (338), Expect = 1e-29
 Identities = 64/119 (53%), Positives = 86/119 (72%)
 Frame = +3

Query: 3   CFFPDSYTFPSLLKSCGYNLAFREGHQLHGQVVQMGFFSDLFVSTVLVDVYAKFRDMESA 182
           CF P++YTF  L+KSCG N+A +EG ++   V++ GF SDL+V T LVD+YAKF +   A
Sbjct: 114 CFVPNNYTFVVLVKSCGLNVAIKEGQEIRCHVLKTGFCSDLYVGTALVDMYAKFGETGYA 173

Query: 183 RRVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMPEKDIVAFNAMIDAYVKSGNI 359
           R +FDEM  RS+VSWTA+I GY R  +   +++LFD+MPEKD   +NAMID Y K G+I
Sbjct: 174 RMLFDEMSARSQVSWTALICGYVRSRDMINARKLFDEMPEKDSAIYNAMIDGYAKLGDI 232



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 32/99 (32%), Positives = 55/99 (55%)
 Frame = +3

Query: 12  PDSYTFPSLLKSCGYNLAFREGHQLHGQVVQMGFFSDLFVSTVLVDVYAKFRDMESARRV 191
           P+  T  S+L +     A   G  +H  V +  F   + + T L+D+YAK  ++E A+ +
Sbjct: 312 PNEVTIVSILPAIADLGALDLGCWIHQFVQKKRFDGLVKICTALIDMYAKCGEVEKAKTI 371

Query: 192 FDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMPEKD 308
           FDEMP++   SW A+I G++  G    + +LF +M +K+
Sbjct: 372 FDEMPEKEIASWNALINGFAVNGRGEEALQLFSEMQDKN 410


>ref|XP_007203920.1| hypothetical protein PRUPE_ppa015039mg, partial [Prunus persica]
           gi|462399451|gb|EMJ05119.1| hypothetical protein
           PRUPE_ppa015039mg, partial [Prunus persica]
          Length = 487

 Score =  134 bits (338), Expect = 1e-29
 Identities = 65/116 (56%), Positives = 83/116 (71%)
 Frame = +3

Query: 12  PDSYTFPSLLKSCGYNLAFREGHQLHGQVVQMGFFSDLFVSTVLVDVYAKFRDMESARRV 191
           PD YTF +L KSCG ++   EG +LH  V+++G   DL+ ST LVD YAKF  M  A ++
Sbjct: 7   PDGYTFTALAKSCGLDVTIWEGQELHCHVIKVGLCLDLYESTSLVDTYAKFGRMSFASKL 66

Query: 192 FDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMPEKDIVAFNAMIDAYVKSGNI 359
           F EM   SRVSWTA+I GY+RLG+   ++ LFDQMPEKD+ AFNAMID YVK G++
Sbjct: 67  FTEMTVTSRVSWTALICGYARLGDMGNARRLFDQMPEKDLAAFNAMIDGYVKLGDM 122


>ref|XP_007052292.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
           cacao] gi|590723825|ref|XP_007052293.1|
           Pentatricopeptide repeat superfamily protein isoform 1
           [Theobroma cacao] gi|590723829|ref|XP_007052294.1|
           Pentatricopeptide repeat superfamily protein isoform 1
           [Theobroma cacao] gi|508704553|gb|EOX96449.1|
           Pentatricopeptide repeat superfamily protein isoform 1
           [Theobroma cacao] gi|508704554|gb|EOX96450.1|
           Pentatricopeptide repeat superfamily protein isoform 1
           [Theobroma cacao] gi|508704555|gb|EOX96451.1|
           Pentatricopeptide repeat superfamily protein isoform 1
           [Theobroma cacao]
          Length = 890

 Score =  134 bits (337), Expect = 1e-29
 Identities = 66/119 (55%), Positives = 87/119 (73%), Gaps = 1/119 (0%)
 Frame = +3

Query: 6   FFPDSYTFPSLLKSCGYNLAFREGHQLHGQVVQMGFFSDLFVSTVLVDVYAKFRDMESAR 185
           F P+  TF +L KSC  N+A  EG Q+H  V++ GF  DL+VST L+D+YAK   M SAR
Sbjct: 406 FVPNKITFLTLAKSCALNMAIWEGLQIHNHVIKFGFCLDLYVSTALLDMYAKLGIMGSAR 465

Query: 186 RVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMPEK-DIVAFNAMIDAYVKSGNI 359
           +VF+EMP+RS VSWTA+I GY++ G+   +KEL D+MPEK D V +NAMID YVK G++
Sbjct: 466 KVFEEMPERSLVSWTALICGYAKAGDMERAKELLDEMPEKEDSVLYNAMIDGYVKLGDL 524



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 31/77 (40%), Positives = 51/77 (66%)
 Frame = +3

Query: 120 DLFVSTVLVDVYAKFRDMESARRVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMP 299
           D  +   ++D Y K  D+ SAR +F++M  R+ +SWT++I GY   G+   ++ LFD MP
Sbjct: 507 DSVLYNAMIDGYVKLGDLVSARNLFNQMQDRNVISWTSMINGYCNSGDVESARLLFDSMP 566

Query: 300 EKDIVAFNAMIDAYVKS 350
           EK++V++NAMI  Y ++
Sbjct: 567 EKNLVSWNAMIGGYCQN 583


>ref|XP_003620999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124365545|gb|ABN09779.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355496014|gb|AES77217.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 601

 Score =  131 bits (329), Expect = 1e-28
 Identities = 66/120 (55%), Positives = 85/120 (70%), Gaps = 1/120 (0%)
 Frame = +3

Query: 3   CFF-PDSYTFPSLLKSCGYNLAFREGHQLHGQVVQMGFFSDLFVSTVLVDVYAKFRDMES 179
           CFF P SYTF  +LK C  + A R+G Q+HG V++  F  DL+V T LVD+Y KF D+  
Sbjct: 117 CFFRPSSYTFTLILKGCSVSDAKRQGFQIHGVVLKNWFCLDLYVGTSLVDMYVKFGDVGF 176

Query: 180 ARRVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMPEKDIVAFNAMIDAYVKSGNI 359
           AR+VFDEM  RS VSWTAVIVGY+R G+   +++LFD M ++D+ AFN MID YVK G +
Sbjct: 177 ARKVFDEMSVRSLVSWTAVIVGYARCGDMVEARKLFDGMVDRDVAAFNVMIDGYVKMGRM 236



 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 31/78 (39%), Positives = 53/78 (67%)
 Frame = +3

Query: 120 DLFVSTVLVDVYAKFRDMESARRVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMP 299
           D+    V++D Y K   M+ AR +FD+M  ++ +SWT+++ GYS  G+   ++ LFD MP
Sbjct: 219 DVAAFNVMIDGYVKMGRMDLARDLFDKMRVKNVISWTSMVHGYSEDGDVDEARFLFDCMP 278

Query: 300 EKDIVAFNAMIDAYVKSG 353
           EK+++++NAMI  Y ++G
Sbjct: 279 EKNVLSWNAMIRGYCQNG 296


>ref|XP_004308509.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g44880-like [Fragaria vesca subsp. vesca]
          Length = 563

 Score =  130 bits (326), Expect = 2e-28
 Identities = 63/118 (53%), Positives = 82/118 (69%)
 Frame = +3

Query: 6   FFPDSYTFPSLLKSCGYNLAFREGHQLHGQVVQMGFFSDLFVSTVLVDVYAKFRDMESAR 185
           F PD YTF +L KSCG + A  EG  +H   V+ G   DL+VST  VD+Y KF  +  AR
Sbjct: 75  FEPDGYTFTALAKSCGLDGARLEGEVIHCHAVKTGLCLDLYVSTAFVDMYVKFGRIGCAR 134

Query: 186 RVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMPEKDIVAFNAMIDAYVKSGNI 359
           +VFDEM +R+RVSWTA+I GY+R G+   ++ LFD+MPE+D  AFNA+ID YVK G +
Sbjct: 135 KVFDEMTERNRVSWTALICGYARAGDMGGARRLFDEMPERDSAAFNALIDGYVKVGEM 192



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 33/95 (34%), Positives = 53/95 (55%)
 Frame = +3

Query: 12  PDSYTFPSLLKSCGYNLAFREGHQLHGQVVQMGFFSDLFVSTVLVDVYAKFRDMESARRV 191
           PD+ T  S+L +     A   GH +H  V +        + T LVD+YAK  ++  AR++
Sbjct: 272 PDAVTIVSILPAIADLGALDLGHWVHEFVERKKLDKLTNIYTALVDMYAKCGEITKARKL 331

Query: 192 FDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQM 296
           FDEMP++   SW A+I G++  G+   + E+F +M
Sbjct: 332 FDEMPEKETASWNALINGFAVNGHGKEALEVFSEM 366


>gb|EPS68042.1| hypothetical protein M569_06731, partial [Genlisea aurea]
          Length = 523

 Score =  124 bits (312), Expect = 1e-26
 Identities = 57/116 (49%), Positives = 84/116 (72%)
 Frame = +3

Query: 12  PDSYTFPSLLKSCGYNLAFREGHQLHGQVVQMGFFSDLFVSTVLVDVYAKFRDMESARRV 191
           PD YTFPSL+K+CG   A REG  +HG   + G  +D+FV + L+D Y K  ++ESAR+V
Sbjct: 81  PDKYTFPSLVKACGRAGALREGRMIHGASFRCGAEADVFVGSSLIDFYGKCGEIESARKV 140

Query: 192 FDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMPEKDIVAFNAMIDAYVKSGNI 359
           FDEMP R++VSWT+++ GY   G+   +  LFD+MPE+++V +NAM+ A+VK G++
Sbjct: 141 FDEMPLRNQVSWTSMMEGYVNSGDMDSALNLFDEMPERNLVTWNAMMKAFVKLGDL 196



 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 24/77 (31%), Positives = 52/77 (67%)
 Frame = +3

Query: 120 DLFVSTVLVDVYAKFRDMESARRVFDEMPQRSRVSWTAVIVGYSRLGNTSMSKELFDQMP 299
           +L     ++  + K  D+++A R+FDEMP R  +S+T ++ GY++ G+ + ++  FD++P
Sbjct: 179 NLVTWNAMMKAFVKLGDLKNALRMFDEMPMRDEISYTTLLDGYAKAGDMAAARTFFDRLP 238

Query: 300 EKDIVAFNAMIDAYVKS 350
            KD+++++A+I  Y ++
Sbjct: 239 RKDLISWSALISGYAQN 255