BLASTX nr result

ID: Cocculus23_contig00056384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00056384
         (304 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]    57   2e-06
ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624...    56   5e-06
gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]               55   8e-06

>emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]
          Length = 1074

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 40/107 (37%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
 Frame = -1

Query: 298 SPLQFVPLSQSPATTISYPSFSAPDQS------LIPANQSTESQQVVPHTLTNAIPQLPL 137
           SP+ F P + SP  T S P+ ++P  +      LI      E+ +    +L ++   +P 
Sbjct: 461 SPILFPPTTSSPLATPSEPAPTSPPANSLSLPPLIHVPFVDEAAETPTTSLQDSTAPIP- 519

Query: 136 DLDANMHPMQTRSKSGISKPKVYLS--TKEPTSIKAALLDPQWKDAM 2
                 HPM TRSKSGI K K YL+  T EP ++K  L DP WK AM
Sbjct: 520 -----GHPMITRSKSGICKKKTYLTSLTIEPRTVKQTLQDPNWKLAM 561


>ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624640 [Citrus sinensis]
          Length = 1682

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 42/107 (39%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
 Frame = -1

Query: 298 SPLQFVPLSQS-PATTISYPSFSAPDQSLIPANQSTESQQVVPHTLT--NAIPQLPLDLD 128
           SPLQ  P S   PA T   P   +P  +   ++ ST     + HT +  + +P  P    
Sbjct: 241 SPLQESPASDYLPADT---PQVFSPSSTSSSSSTSTSHTHPIHHTQSPPHILPAAP---- 293

Query: 127 ANMHPMQTRSKSGISKPKVYLST-----KEPTSIKAALLDPQWKDAM 2
              HPM TRSK+GI KPK +L+       EPTS+ AAL DP+W  AM
Sbjct: 294 PIGHPMITRSKAGIFKPKSFLAALLAIPSEPTSVSAALSDPKWFKAM 340


>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
          Length = 1534

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
 Frame = -1

Query: 274  SQSPATTISYPSFSAPDQSLIPANQSTESQQVVPHTLTNAIPQLPLDLDANMHPMQTRSK 95
            + +P+++I   +   P  S  P N S ES      + T+ +P  P     N HPM+TR+K
Sbjct: 942  NSNPSSSIQTQNEPNPSPSPTPQNSSPESSPSSSTSATSTVPNPPPPPPTNNHPMRTRAK 1001

Query: 94   SGISKPKVYLS---------TKEPTSIKAALLDPQWKDAM 2
            + I+KPK  LS          + P ++  AL D +W++AM
Sbjct: 1002 NHITKPKTKLSLLAKTVQTRPQIPNTVNQALRDEKWRNAM 1041


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