BLASTX nr result

ID: Cocculus23_contig00056267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00056267
         (222 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004513130.1| PREDICTED: uncharacterized protein LOC101488...    62   1e-07
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi...    56   5e-06
ref|XP_006579916.1| PREDICTED: F-box-like/WD repeat-containing p...    56   6e-06
ref|XP_006579914.1| PREDICTED: F-box-like/WD repeat-containing p...    56   6e-06

>ref|XP_004513130.1| PREDICTED: uncharacterized protein LOC101488260 [Cicer arietinum]
          Length = 752

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
 Frame = -1

Query: 222 YTSSDSLFSVSNDTTS-MSLSDIWHRRLGHPSNTVLHQVVRMCNPKVSLNKTLDICSSFQ 46
           Y  S +   V+ D+   MS+ + WHR+LGHP+N VL +V++ CN K S N    +C + Q
Sbjct: 398 YQLSSANSQVNKDSCIYMSVKENWHRKLGHPNNKVLEKVLKNCNVKTSSNDHFLLCEACQ 457

Query: 45  LGKSHKLPFPNFLS 4
            GK H LPF +  S
Sbjct: 458 FGKLHLLPFTSSYS 471


>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1402

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
 Frame = -1

Query: 210 DSLFSVSNDTTSMSLSD-IWHRRLGHPSNTVLHQVVRMCNPKVSLNKT-LDICSSFQLGK 37
           DS F     T   S SD +WHRRLGHP   VL Q+V+     +S+NKT   +C + QLGK
Sbjct: 448 DSQFKAFFSTRQQSASDEVWHRRLGHPHPQVLQQLVK--TNSISINKTSKSLCEACQLGK 505

Query: 36  SHKLPF 19
           S +LPF
Sbjct: 506 STRLPF 511


>ref|XP_006579916.1| PREDICTED: F-box-like/WD repeat-containing protein TBL1XR1-A-like
           isoform X3 [Glycine max]
          Length = 553

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
 Frame = -1

Query: 219 TSSDSLFSVSN-----DTTSMSLSDIWHRRLGHPSNTVLHQVVRMCNPKVSLNKTL-DIC 58
           TS+ ++ + SN     D TS S +++WH RLGHP+  ++  V++ CN    LNK + + C
Sbjct: 432 TSAATINNTSNIVSNSDVTSSSSANLWHARLGHPNGHLMKIVLKQCNIS-QLNKNITEFC 490

Query: 57  SSFQLGKSHKLP 22
           SS  +GKSH+LP
Sbjct: 491 SSCCMGKSHRLP 502


>ref|XP_006579914.1| PREDICTED: F-box-like/WD repeat-containing protein TBL1XR1-A-like
           isoform X1 [Glycine max]
          Length = 649

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
 Frame = -1

Query: 219 TSSDSLFSVSN-----DTTSMSLSDIWHRRLGHPSNTVLHQVVRMCNPKVSLNKTL-DIC 58
           TS+ ++ + SN     D TS S +++WH RLGHP+  ++  V++ CN    LNK + + C
Sbjct: 528 TSAATINNTSNIVSNSDVTSSSSANLWHARLGHPNGHLMKIVLKQCNIS-QLNKNITEFC 586

Query: 57  SSFQLGKSHKLP 22
           SS  +GKSH+LP
Sbjct: 587 SSCCMGKSHRLP 598


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