BLASTX nr result
ID: Cocculus23_contig00056238
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00056238
(296 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006430611.1| hypothetical protein CICLE_v10011485mg [Citr... 126 3e-27
ref|XP_006482125.1| PREDICTED: pentatricopeptide repeat-containi... 125 8e-27
ref|XP_007214531.1| hypothetical protein PRUPE_ppa014874mg, part... 122 7e-26
ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containi... 122 7e-26
emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera] 122 7e-26
ref|XP_002305195.1| pentatricopeptide repeat-containing family p... 120 2e-25
ref|XP_002531188.1| pentatricopeptide repeat-containing protein,... 119 4e-25
gb|EXB56945.1| hypothetical protein L484_019990 [Morus notabilis] 113 3e-23
ref|XP_004301459.1| PREDICTED: pentatricopeptide repeat-containi... 111 1e-22
ref|XP_004240257.1| PREDICTED: pentatricopeptide repeat-containi... 110 2e-22
ref|XP_004486552.1| PREDICTED: pentatricopeptide repeat-containi... 110 3e-22
ref|XP_006391386.1| hypothetical protein EUTSA_v10018418mg [Eutr... 108 6e-22
ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containi... 108 8e-22
ref|XP_004140361.1| PREDICTED: pentatricopeptide repeat-containi... 108 8e-22
gb|EYU26093.1| hypothetical protein MIMGU_mgv1a027076mg [Mimulus... 104 1e-20
ref|XP_002887023.1| pentatricopeptide repeat-containing protein ... 102 6e-20
ref|XP_006854132.1| hypothetical protein AMTR_s00048p00164960 [A... 101 1e-19
ref|NP_849849.1| pentatricopeptide repeat-containing protein [Ar... 100 2e-19
ref|XP_006302104.1| hypothetical protein CARUB_v10020095mg [Caps... 98 1e-18
ref|XP_007022704.1| Pentatricopeptide repeat (PPR) superfamily p... 98 1e-18
>ref|XP_006430611.1| hypothetical protein CICLE_v10011485mg [Citrus clementina]
gi|557532668|gb|ESR43851.1| hypothetical protein
CICLE_v10011485mg [Citrus clementina]
Length = 521
Score = 126 bits (317), Expect = 3e-27
Identities = 57/94 (60%), Positives = 76/94 (80%)
Frame = -3
Query: 294 CDSLRRGENWDKLTKSFDSIKLTDSIVEKVLLELKKPIDAKRALSFFHWSANRAKIEHDI 115
CD RRG NWD L+K F+SI L DS+VE VLLELK+P+DAKRAL FFHWSA+ +H++
Sbjct: 44 CDCFRRGWNWDTLSKQFNSIHLNDSLVENVLLELKEPVDAKRALGFFHWSAHHKSYQHNL 103
Query: 114 RSYCITVHILVRARLIMEARALLESVVRRTVEDE 13
SY +T+HILVRARL+++ARAL+ESV+ + + D+
Sbjct: 104 CSYSVTIHILVRARLLVDARALIESVLEKHIGDD 137
>ref|XP_006482125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like isoform X1 [Citrus sinensis]
Length = 553
Score = 125 bits (313), Expect = 8e-27
Identities = 56/94 (59%), Positives = 76/94 (80%)
Frame = -3
Query: 294 CDSLRRGENWDKLTKSFDSIKLTDSIVEKVLLELKKPIDAKRALSFFHWSANRAKIEHDI 115
CD RRG NWD L+K F+SI L DS+VE VLLELK+P+DAKRAL FFHWSA+ +H++
Sbjct: 44 CDCFRRGWNWDTLSKQFNSIHLNDSLVENVLLELKEPVDAKRALGFFHWSAHHKSYQHNL 103
Query: 114 RSYCITVHILVRARLIMEARALLESVVRRTVEDE 13
SY +T+HILV+ARL+++ARAL+ESV+ + + D+
Sbjct: 104 CSYSVTIHILVQARLLVDARALIESVLEKHIGDD 137
>ref|XP_007214531.1| hypothetical protein PRUPE_ppa014874mg, partial [Prunus persica]
gi|462410396|gb|EMJ15730.1| hypothetical protein
PRUPE_ppa014874mg, partial [Prunus persica]
Length = 499
Score = 122 bits (305), Expect = 7e-26
Identities = 57/92 (61%), Positives = 72/92 (78%)
Frame = -3
Query: 291 DSLRRGENWDKLTKSFDSIKLTDSIVEKVLLELKKPIDAKRALSFFHWSANRAKIEHDIR 112
DS R NWD LT F+S+KL +V+ VLLELK+PIDAKRAL FFHW+A+R EH +
Sbjct: 39 DSFRSSWNWDTLTTKFESVKLDGGLVDSVLLELKEPIDAKRALGFFHWAAHRKSFEHGVW 98
Query: 111 SYCITVHILVRARLIMEARALLESVVRRTVED 16
SY IT+HIL RARL+M+ARALLESV+++T E+
Sbjct: 99 SYSITIHILARARLLMDARALLESVLKKTAEN 130
>ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Vitis vinifera]
Length = 547
Score = 122 bits (305), Expect = 7e-26
Identities = 56/89 (62%), Positives = 73/89 (82%)
Frame = -3
Query: 294 CDSLRRGENWDKLTKSFDSIKLTDSIVEKVLLELKKPIDAKRALSFFHWSANRAKIEHDI 115
CDSLRRG NWD L + F S++LT+S V +VLLELKKPIDAK+AL FFHWSA +EH +
Sbjct: 45 CDSLRRGLNWDALNQRFGSLELTESFVGRVLLELKKPIDAKQALGFFHWSAQCKNLEHGL 104
Query: 114 RSYCITVHILVRARLIMEARALLESVVRR 28
SYCIT+HILV A+L+M+A++LLES +++
Sbjct: 105 ASYCITIHILVGAQLLMDAQSLLESTLKK 133
>emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]
Length = 642
Score = 122 bits (305), Expect = 7e-26
Identities = 56/89 (62%), Positives = 72/89 (80%)
Frame = -3
Query: 294 CDSLRRGENWDKLTKSFDSIKLTDSIVEKVLLELKKPIDAKRALSFFHWSANRAKIEHDI 115
CDSLRRG NWD L + F S++LT+S V +VLLELKKPIDAK+AL FFHWSA +EH +
Sbjct: 45 CDSLRRGLNWDALNQRFGSLELTESFVGRVLLELKKPIDAKQALGFFHWSAQCKNLEHGV 104
Query: 114 RSYCITVHILVRARLIMEARALLESVVRR 28
SYCIT+HILV A L+M+A++LLES +++
Sbjct: 105 ASYCITIHILVGAHLLMDAQSLLESTLKK 133
>ref|XP_002305195.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222848159|gb|EEE85706.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 556
Score = 120 bits (301), Expect = 2e-25
Identities = 55/93 (59%), Positives = 76/93 (81%)
Frame = -3
Query: 294 CDSLRRGENWDKLTKSFDSIKLTDSIVEKVLLELKKPIDAKRALSFFHWSANRAKIEHDI 115
CDSLRRG NWD L + F+S++L + +V+ VLLELK+P DAKRAL FFHWSA R H +
Sbjct: 51 CDSLRRGYNWDTLNRKFESLQLNNLLVKNVLLELKEPTDAKRALGFFHWSARR-NFVHGV 109
Query: 114 RSYCITVHILVRARLIMEARALLESVVRRTVED 16
+SYC+ +HIL++ARLIM+A+ALLES+++++V D
Sbjct: 110 QSYCLMIHILIQARLIMDAQALLESLLKKSVGD 142
>ref|XP_002531188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223529229|gb|EEF31203.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 619
Score = 119 bits (298), Expect = 4e-25
Identities = 56/93 (60%), Positives = 72/93 (77%)
Frame = -3
Query: 294 CDSLRRGENWDKLTKSFDSIKLTDSIVEKVLLELKKPIDAKRALSFFHWSANRAKIEHDI 115
CDSLRRG NW L+ F ++L +VEKVLLELK+PIDAKRAL FFHWSA R H +
Sbjct: 51 CDSLRRGHNWVSLSGKFQYVELNHLLVEKVLLELKEPIDAKRALGFFHWSAQRKNFVHGV 110
Query: 114 RSYCITVHILVRARLIMEARALLESVVRRTVED 16
SYC+ V+ILVRA+L+ +A+ALLES++++ VED
Sbjct: 111 WSYCLMVNILVRAQLLNDAQALLESILKKNVED 143
>gb|EXB56945.1| hypothetical protein L484_019990 [Morus notabilis]
Length = 829
Score = 113 bits (282), Expect = 3e-23
Identities = 48/93 (51%), Positives = 71/93 (76%)
Frame = -3
Query: 294 CDSLRRGENWDKLTKSFDSIKLTDSIVEKVLLELKKPIDAKRALSFFHWSANRAKIEHDI 115
C++ R G WD L++ F I+ + ++EK+LLELK+PIDAK AL FFHW+A+R +H +
Sbjct: 218 CNAFRSGWTWDTLSREFHHIEFNEQLIEKILLELKQPIDAKWALGFFHWAAHRVNFQHCL 277
Query: 114 RSYCITVHILVRARLIMEARALLESVVRRTVED 16
RSYC+ +HILVRARL ++ARAL+E+V+++ D
Sbjct: 278 RSYCLAIHILVRARLNLDARALIETVLKKNAGD 310
>ref|XP_004301459.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 530
Score = 111 bits (277), Expect = 1e-22
Identities = 52/93 (55%), Positives = 67/93 (72%)
Frame = -3
Query: 294 CDSLRRGENWDKLTKSFDSIKLTDSIVEKVLLELKKPIDAKRALSFFHWSANRAKIEHDI 115
CDS + G +WD LT F +KL +VE VLLELK P DAKRAL FFHW + R +H +
Sbjct: 36 CDSFKSGWSWDALTSKFACVKLDAKLVENVLLELKDPNDAKRALGFFHWVSKRKDFDHGV 95
Query: 114 RSYCITVHILVRARLIMEARALLESVVRRTVED 16
SY IT+HILVRA++ M+ARAL+ESV+++ V D
Sbjct: 96 WSYSITIHILVRAKMAMDARALMESVLKKNVGD 128
>ref|XP_004240257.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Solanum lycopersicum]
Length = 552
Score = 110 bits (276), Expect = 2e-22
Identities = 51/89 (57%), Positives = 65/89 (73%)
Frame = -3
Query: 294 CDSLRRGENWDKLTKSFDSIKLTDSIVEKVLLELKKPIDAKRALSFFHWSANRAKIEHDI 115
C+SLRRGENW LTK F S TD IV++VLL+LK+P DAK ALSFFHWSA H +
Sbjct: 54 CNSLRRGENWQVLTKKFQSFHFTDPIVQEVLLQLKEPHDAKNALSFFHWSAKSFNSRHGV 113
Query: 114 RSYCITVHILVRARLIMEARALLESVVRR 28
YCI +HIL +++L+ A AL+ESV+R+
Sbjct: 114 FIYCIIIHILAKSKLVRHANALIESVLRK 142
>ref|XP_004486552.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Cicer arietinum]
gi|502183720|ref|XP_004517198.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Cicer arietinum]
Length = 551
Score = 110 bits (274), Expect = 3e-22
Identities = 52/89 (58%), Positives = 66/89 (74%)
Frame = -3
Query: 294 CDSLRRGENWDKLTKSFDSIKLTDSIVEKVLLELKKPIDAKRALSFFHWSANRAKIEHDI 115
C+S R +NWD LT F SIKL S+VE+VLLELK P DAK ALSFFHWS+ +H +
Sbjct: 42 CNSFRMKQNWDTLTHKFSSIKLNHSLVEQVLLELKHPTDAKNALSFFHWSSKTHSFQHGL 101
Query: 114 RSYCITVHILVRARLIMEARALLESVVRR 28
RSY IT+H+L++A LI +A ALLES+V +
Sbjct: 102 RSYSITIHLLLQAGLITDANALLESLVNK 130
>ref|XP_006391386.1| hypothetical protein EUTSA_v10018418mg [Eutrema salsugineum]
gi|557087820|gb|ESQ28672.1| hypothetical protein
EUTSA_v10018418mg [Eutrema salsugineum]
Length = 511
Score = 108 bits (271), Expect = 6e-22
Identities = 50/94 (53%), Positives = 67/94 (71%)
Frame = -3
Query: 291 DSLRRGENWDKLTKSFDSIKLTDSIVEKVLLELKKPIDAKRALSFFHWSANRAKIEHDIR 112
+SLR ENWD L+ + SI +DS+V+K+LL K+P AKRALSFFHWSAN + H
Sbjct: 48 ESLRNSENWDTLSNKYSSIDFSDSLVKKILLRFKQPETAKRALSFFHWSANTRNLRHGTS 107
Query: 111 SYCITVHILVRARLIMEARALLESVVRRTVEDED 10
SY + +HILVRARL+++ARAL+ES + + D D
Sbjct: 108 SYAVAIHILVRARLLVDARALIESSLLNSDSDSD 141
>ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Cucumis sativus]
Length = 539
Score = 108 bits (270), Expect = 8e-22
Identities = 47/89 (52%), Positives = 70/89 (78%)
Frame = -3
Query: 294 CDSLRRGENWDKLTKSFDSIKLTDSIVEKVLLELKKPIDAKRALSFFHWSANRAKIEHDI 115
CDSL R ++WD L++ F ++L D +V+KVLL+ ++P+DAKRAL FFHWSA R H
Sbjct: 46 CDSLTRRQSWDTLSRKFQFLELNDFLVQKVLLKFQQPVDAKRALGFFHWSAKRKNFNHGP 105
Query: 114 RSYCITVHILVRARLIMEARALLESVVRR 28
+S+ I +HILV+ARL+++ARALLES++++
Sbjct: 106 QSFGIMIHILVKARLVLDARALLESILKK 134
>ref|XP_004140361.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Cucumis sativus]
Length = 517
Score = 108 bits (270), Expect = 8e-22
Identities = 47/89 (52%), Positives = 70/89 (78%)
Frame = -3
Query: 294 CDSLRRGENWDKLTKSFDSIKLTDSIVEKVLLELKKPIDAKRALSFFHWSANRAKIEHDI 115
CDSL R ++WD L++ F ++L D +V+KVLL+ ++P+DAKRAL FFHWSA R H
Sbjct: 24 CDSLTRRQSWDTLSRKFQFLELNDFLVQKVLLKFQQPVDAKRALGFFHWSAKRKNFNHGP 83
Query: 114 RSYCITVHILVRARLIMEARALLESVVRR 28
+S+ I +HILV+ARL+++ARALLES++++
Sbjct: 84 QSFGIMIHILVKARLVLDARALLESILKK 112
>gb|EYU26093.1| hypothetical protein MIMGU_mgv1a027076mg [Mimulus guttatus]
Length = 541
Score = 104 bits (260), Expect = 1e-20
Identities = 45/94 (47%), Positives = 69/94 (73%)
Frame = -3
Query: 291 DSLRRGENWDKLTKSFDSIKLTDSIVEKVLLELKKPIDAKRALSFFHWSANRAKIEHDIR 112
DSL +W L++ F S+K T+ IV+ +LL+LK+PI++++AL+FFHWS EH +
Sbjct: 45 DSLHERRSWKTLSEKFSSLKFTNQIVQNILLQLKEPINSRKALNFFHWSRKEMNFEHGLS 104
Query: 111 SYCITVHILVRARLIMEARALLESVVRRTVEDED 10
+YC+T+HILV+ARLI +A+AL+ESV+ + D D
Sbjct: 105 TYCLTIHILVKARLIKDAKALIESVLIKDFSDGD 138
>ref|XP_002887023.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297332864|gb|EFH63282.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 539
Score = 102 bits (254), Expect = 6e-20
Identities = 46/91 (50%), Positives = 66/91 (72%)
Frame = -3
Query: 288 SLRRGENWDKLTKSFDSIKLTDSIVEKVLLELKKPIDAKRALSFFHWSANRAKIEHDIRS 109
SL+ +NW+ L+ F SI L+DS++E +LL P AKRAL+FFHWSA+ + H IRS
Sbjct: 52 SLQSNDNWETLSTKFSSIDLSDSLIETILLRFNSPETAKRALTFFHWSAHTRNLRHGIRS 111
Query: 108 YCITVHILVRARLIMEARALLESVVRRTVED 16
Y +T+HILV+ARL+++ARAL+ES + + D
Sbjct: 112 YAVTIHILVKARLLIDARALIESSLLNSSSD 142
>ref|XP_006854132.1| hypothetical protein AMTR_s00048p00164960 [Amborella trichopoda]
gi|548857801|gb|ERN15599.1| hypothetical protein
AMTR_s00048p00164960 [Amborella trichopoda]
Length = 562
Score = 101 bits (251), Expect = 1e-19
Identities = 51/94 (54%), Positives = 67/94 (71%), Gaps = 1/94 (1%)
Frame = -3
Query: 294 CDSLRRGENWDKLTKSFDSIKLTDSIVEKVLLELKKPIDAKRALSFFHWSANRAKIEHDI 115
CD LR+G NWD L+ F I L ++I+E VLL LK+ +AK ALSFFHWS+ KI+H +
Sbjct: 33 CDMLRKGGNWDDLSLCFGVINLNEAIIEHVLLNLKELNEAKLALSFFHWSSLCKKIDHGL 92
Query: 114 RSYCITVHILVRARLIMEARALLESVVRR-TVED 16
+YCI VHILVR+ L A+ALLES V++ +ED
Sbjct: 93 STYCIIVHILVRSELFTHAQALLESAVKKHCIED 126
>ref|NP_849849.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215314|sp|Q3ECH5.1|PP107_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g66345, mitochondrial; Flags: Precursor
gi|332196377|gb|AEE34498.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 544
Score = 100 bits (250), Expect = 2e-19
Identities = 45/93 (48%), Positives = 67/93 (72%)
Frame = -3
Query: 288 SLRRGENWDKLTKSFDSIKLTDSIVEKVLLELKKPIDAKRALSFFHWSANRAKIEHDIRS 109
SL+ + W+ L+ F SI L+DS++E +LL K P AK+ALSFFHWS++ + H I+S
Sbjct: 56 SLQSNDTWETLSTKFSSIDLSDSLIETILLRFKNPETAKQALSFFHWSSHTRNLRHGIKS 115
Query: 108 YCITVHILVRARLIMEARALLESVVRRTVEDED 10
Y +T+HILV+ARL+++ARAL+ES + + D D
Sbjct: 116 YALTIHILVKARLLIDARALIESSLLNSPPDSD 148
>ref|XP_006302104.1| hypothetical protein CARUB_v10020095mg [Capsella rubella]
gi|482570814|gb|EOA35002.1| hypothetical protein
CARUB_v10020095mg [Capsella rubella]
Length = 548
Score = 98.2 bits (243), Expect = 1e-18
Identities = 44/83 (53%), Positives = 62/83 (74%)
Frame = -3
Query: 288 SLRRGENWDKLTKSFDSIKLTDSIVEKVLLELKKPIDAKRALSFFHWSANRAKIEHDIRS 109
SL+ +NW+ L+ F SI L+DSIV ++LL K+P AKRAL+FFHWSA+ + H S
Sbjct: 55 SLQSNDNWETLSTKFSSIDLSDSIVNQILLRFKQPESAKRALTFFHWSAHTRNLRHGTTS 114
Query: 108 YCITVHILVRARLIMEARALLES 40
Y + +HILV+ARL+++ARAL+ES
Sbjct: 115 YAVAIHILVKARLLIDARALIES 137
>ref|XP_007022704.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
isoform 5 [Theobroma cacao] gi|508722332|gb|EOY14229.1|
Pentatricopeptide repeat (PPR) superfamily protein,
putative isoform 5 [Theobroma cacao]
Length = 504
Score = 97.8 bits (242), Expect = 1e-18
Identities = 45/96 (46%), Positives = 66/96 (68%)
Frame = -3
Query: 291 DSLRRGENWDKLTKSFDSIKLTDSIVEKVLLELKKPIDAKRALSFFHWSANRAKIEHDIR 112
DS ++ NW LTK+F S++LT S+V++VLL+LK+P A+ AL+FF+WSA +H I
Sbjct: 51 DSFKKTHNWGTLTKTFSSVQLTHSLVQQVLLQLKQPEHARSALNFFYWSAKSQNFKHQIY 110
Query: 111 SYCITVHILVRARLIMEARALLESVVRRTVEDEDGS 4
SYCI +HILV A+ + EA+ LL S ++ + D S
Sbjct: 111 SYCIAIHILVHAKQLPEAKILLHSALKTSAPDSTRS 146