BLASTX nr result
ID: Cocculus23_contig00056068
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00056068
(224 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 125 5e-27
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 117 2e-24
emb|CAN71138.1| hypothetical protein VITISV_008660 [Vitis vinifera] 112 7e-23
emb|CAN60188.1| hypothetical protein VITISV_002117 [Vitis vinifera] 108 6e-22
emb|CAN64002.1| hypothetical protein VITISV_023116 [Vitis vinifera] 105 7e-21
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz... 96 5e-18
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera] 91 1e-16
gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Ar... 91 2e-16
emb|CAN76948.1| hypothetical protein VITISV_017167 [Vitis vinifera] 91 2e-16
emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|72697... 90 3e-16
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group... 89 6e-16
ref|XP_004513130.1| PREDICTED: uncharacterized protein LOC101488... 88 1e-15
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 88 1e-15
emb|CAN77012.1| hypothetical protein VITISV_036882 [Vitis vinifera] 88 1e-15
emb|CAN65504.1| hypothetical protein VITISV_028342 [Vitis vinifera] 87 2e-15
emb|CAN67970.1| hypothetical protein VITISV_025093 [Vitis vinifera] 87 2e-15
gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group] 87 2e-15
emb|CAN80715.1| hypothetical protein VITISV_042933 [Vitis vinifera] 87 3e-15
emb|CAN71161.1| hypothetical protein VITISV_009113 [Vitis vinifera] 87 3e-15
gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana] 87 3e-15
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 125 bits (315), Expect = 5e-27
Identities = 50/74 (67%), Positives = 67/74 (90%)
Frame = +2
Query: 2 VHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLCHKSEAFQTFIHFKTQVELQCGHK 181
+H D+WGP+ SS+G++YYIHF+D++SR+TWIY+L HKSEAFQ F+HFK+QVELQ GHK
Sbjct: 566 IHTDLWGPASTPSSHGHQYYIHFIDAYSRFTWIYMLKHKSEAFQVFLHFKSQVELQLGHK 625
Query: 182 IKAIQTDWGGEYQT 223
IKA+Q+DWGGEY++
Sbjct: 626 IKAVQSDWGGEYRS 639
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 117 bits (292), Expect = 2e-24
Identities = 48/73 (65%), Positives = 67/73 (91%)
Frame = +2
Query: 2 VHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLCHKSEAFQTFIHFKTQVELQCGHK 181
+HLD+WGP+ ++S++GYRYYIHFVD+FSR++WI+LL +KSEA +TF++FKTQVELQ K
Sbjct: 583 IHLDLWGPTLVLSNSGYRYYIHFVDAFSRFSWIFLLRNKSEAIKTFVNFKTQVELQFDLK 642
Query: 182 IKAIQTDWGGEYQ 220
IK++QTDWGGE++
Sbjct: 643 IKSLQTDWGGEFR 655
>emb|CAN71138.1| hypothetical protein VITISV_008660 [Vitis vinifera]
Length = 1138
Score = 112 bits (279), Expect = 7e-23
Identities = 45/69 (65%), Positives = 64/69 (92%)
Frame = +2
Query: 14 IWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLCHKSEAFQTFIHFKTQVELQCGHKIKAI 193
+WGP+P++S++GYRYYIHFVD+FSR++WI+LL ++SEA +TF++FKTQVELQ KIK++
Sbjct: 495 LWGPAPVLSNSGYRYYIHFVDAFSRFSWIFLLRNESEAIKTFVNFKTQVELQFDSKIKSL 554
Query: 194 QTDWGGEYQ 220
QTDWGGE++
Sbjct: 555 QTDWGGEFR 563
>emb|CAN60188.1| hypothetical protein VITISV_002117 [Vitis vinifera]
Length = 1079
Score = 108 bits (271), Expect = 6e-22
Identities = 46/72 (63%), Positives = 59/72 (81%)
Frame = +2
Query: 2 VHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLCHKSEAFQTFIHFKTQVELQCGHK 181
V+ D+WGPSP+ SSNGY+YY+ FVD+FSRY WIYLL +KS +FQTF +FK Q +LQ G K
Sbjct: 512 VYSDLWGPSPVQSSNGYKYYVCFVDAFSRYNWIYLLRNKSNSFQTFQNFKAQAKLQLGFK 571
Query: 182 IKAIQTDWGGEY 217
IK +Q+DW GE+
Sbjct: 572 IKCLQSDWRGEF 583
>emb|CAN64002.1| hypothetical protein VITISV_023116 [Vitis vinifera]
Length = 1211
Score = 105 bits (262), Expect = 7e-21
Identities = 44/67 (65%), Positives = 61/67 (91%)
Frame = +2
Query: 20 GPSPIMSSNGYRYYIHFVDSFSRYTWIYLLCHKSEAFQTFIHFKTQVELQCGHKIKAIQT 199
GP+P++S++GYRYYIHFVD FSR++WI+LL +KSEA +TF++FKTQVELQ KIK++QT
Sbjct: 410 GPAPVLSNSGYRYYIHFVDVFSRFSWIFLLRNKSEAIKTFVNFKTQVELQFDSKIKSLQT 469
Query: 200 DWGGEYQ 220
+WGGE++
Sbjct: 470 NWGGEFR 476
>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1399
Score = 95.9 bits (237), Expect = 5e-18
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = +2
Query: 11 DIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLCHKSEAFQTFIHFKTQVELQCGHKIKA 190
++WGP+PI S G ++Y+ F+D +S++TW+YLL HKSE FQ F F+T VE GHKI A
Sbjct: 483 NVWGPAPI-SVGGKKFYVSFIDDYSKFTWVYLLKHKSEVFQKFQEFQTLVERFFGHKILA 541
Query: 191 IQTDWGGEYQ 220
+QTDWGGEYQ
Sbjct: 542 VQTDWGGEYQ 551
>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
Length = 1131
Score = 91.3 bits (225), Expect = 1e-16
Identities = 34/73 (46%), Positives = 53/73 (72%)
Frame = +2
Query: 2 VHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLCHKSEAFQTFIHFKTQVELQCGHK 181
VH D+WGP+P++ +NG RY++ FVD +R++W+YLL K +A F+ FK +E Q K
Sbjct: 494 VHSDLWGPAPVVGTNGARYFVLFVDDHTRFSWLYLLAFKDQAISGFLQFKVMIETQFDTK 553
Query: 182 IKAIQTDWGGEYQ 220
++ +QT+WGGE+Q
Sbjct: 554 VRMLQTNWGGEFQ 566
>gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Arabidopsis thaliana]
Length = 1522
Score = 90.9 bits (224), Expect = 2e-16
Identities = 39/72 (54%), Positives = 50/72 (69%)
Frame = +2
Query: 2 VHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLCHKSEAFQTFIHFKTQVELQCGHK 181
+H D+WGPSP S G+RYY+ F+D +SR+TW Y L KS+ F TF+ F+ VE Q GHK
Sbjct: 519 IHCDLWGPSPTSSVQGFRYYVVFIDHYSRFTWFYPLKLKSDFFSTFVMFQKLVENQLGHK 578
Query: 182 IKAIQTDWGGEY 217
IK Q D GGE+
Sbjct: 579 IKIFQCDGGGEF 590
>emb|CAN76948.1| hypothetical protein VITISV_017167 [Vitis vinifera]
Length = 467
Score = 90.5 bits (223), Expect = 2e-16
Identities = 39/74 (52%), Positives = 56/74 (75%)
Frame = +2
Query: 2 VHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLCHKSEAFQTFIHFKTQVELQCGHK 181
++ DIWGP+P++S++G RYYI F+D +++ WI+ L KS A QTFIHF+ VE Q K
Sbjct: 153 IYSDIWGPAPVLSTSGARYYISFLDDATKFLWIFPLKLKSNACQTFIHFQAIVERQFDTK 212
Query: 182 IKAIQTDWGGEYQT 223
IKA+Q+DW GEY++
Sbjct: 213 IKALQSDWDGEYRS 226
>emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|7269745|emb|CAB81478.1|
putative protein [Arabidopsis thaliana]
Length = 1415
Score = 90.1 bits (222), Expect = 3e-16
Identities = 37/72 (51%), Positives = 52/72 (72%)
Frame = +2
Query: 2 VHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLCHKSEAFQTFIHFKTQVELQCGHK 181
VH D+WGP+P++SS G+RYY+ F+D++SR+TW Y L KS+ F F+ F+ VE QC K
Sbjct: 485 VHCDLWGPAPVVSSQGFRYYVIFIDNYSRFTWFYPLRLKSDFFSVFLTFQKMVENQCQQK 544
Query: 182 IKAIQTDWGGEY 217
I + Q D GGE+
Sbjct: 545 IASFQCDGGGEF 556
>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1256
Score = 89.0 bits (219), Expect = 6e-16
Identities = 38/70 (54%), Positives = 51/70 (72%)
Frame = +2
Query: 11 DIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLCHKSEAFQTFIHFKTQVELQCGHKIKA 190
D+WGP+P+ + G +YY+ F+D+FSR+TWIY L +KSE FQ F F+ VE KI +
Sbjct: 350 DVWGPAPV-AGGGKKYYVSFIDAFSRFTWIYFLKYKSEVFQKFQEFQCLVERMFNRKIIS 408
Query: 191 IQTDWGGEYQ 220
+QTDWGGEYQ
Sbjct: 409 MQTDWGGEYQ 418
>ref|XP_004513130.1| PREDICTED: uncharacterized protein LOC101488260 [Cicer arietinum]
Length = 752
Score = 88.2 bits (217), Expect = 1e-15
Identities = 36/73 (49%), Positives = 49/73 (67%)
Frame = +2
Query: 2 VHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLCHKSEAFQTFIHFKTQVELQCGHK 181
+H +WGP+PI+S + ++YY+HF+D FSR+TWI+ L K E F FK VE Q K
Sbjct: 480 IHSGVWGPAPILSPSNFKYYVHFIDDFSRFTWIFPLKQKPETVHAFTQFKNMVENQFSKK 539
Query: 182 IKAIQTDWGGEYQ 220
IK +Q D GGEY+
Sbjct: 540 IKILQCDGGGEYK 552
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 87.8 bits (216), Expect = 1e-15
Identities = 39/74 (52%), Positives = 51/74 (68%)
Frame = +2
Query: 2 VHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLCHKSEAFQTFIHFKTQVELQCGHK 181
V D+WGP+P S +YY+ F+D FS++TWIYL+ HKS+ F F F+ VE Q K
Sbjct: 512 VFSDVWGPAP-ESVGRKKYYVSFIDDFSKFTWIYLIQHKSQVFDKFQEFQVMVERQFDRK 570
Query: 182 IKAIQTDWGGEYQT 223
I A+QTDWGGEYQ+
Sbjct: 571 ILAMQTDWGGEYQS 584
>emb|CAN77012.1| hypothetical protein VITISV_036882 [Vitis vinifera]
Length = 618
Score = 87.8 bits (216), Expect = 1e-15
Identities = 36/71 (50%), Positives = 49/71 (69%)
Frame = +2
Query: 2 VHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLCHKSEAFQTFIHFKTQVELQCGHK 181
VH D+WGPSP +S+ +RYY+ F+D++S + WIY L +K + F F HFKTQ EL +
Sbjct: 199 VHFDLWGPSPSISTITFRYYVTFIDAYSGFIWIYFLKNKLKVFHVFQHFKTQAELHHNWR 258
Query: 182 IKAIQTDWGGE 214
+K TDWGGE
Sbjct: 259 LKTSSTDWGGE 269
>emb|CAN65504.1| hypothetical protein VITISV_028342 [Vitis vinifera]
Length = 1252
Score = 87.4 bits (215), Expect = 2e-15
Identities = 37/72 (51%), Positives = 51/72 (70%)
Frame = +2
Query: 2 VHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLCHKSEAFQTFIHFKTQVELQCGHK 181
VH+D+WGPSP+ S G RYYI F+D SR W+Y L +KS+ F+TF +K VE + G K
Sbjct: 1170 VHIDLWGPSPVASLGGSRYYITFIDDSSRKVWVYFLKNKSDVFETFKKWKAMVEKETGLK 1229
Query: 182 IKAIQTDWGGEY 217
+K +++D GGEY
Sbjct: 1230 VKCLRSDNGGEY 1241
>emb|CAN67970.1| hypothetical protein VITISV_025093 [Vitis vinifera]
Length = 1023
Score = 87.4 bits (215), Expect = 2e-15
Identities = 37/72 (51%), Positives = 49/72 (68%)
Frame = +2
Query: 2 VHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLCHKSEAFQTFIHFKTQVELQCGHK 181
+H D+WGPSPI S ++YY+ F+D SR+TW+Y L KSE F+TFI F V+ Q
Sbjct: 451 IHSDVWGPSPISSHEKFKYYVTFIDDHSRFTWVYFLRSKSEVFRTFIEFLAYVDNQFSIS 510
Query: 182 IKAIQTDWGGEY 217
IK ++TD GGEY
Sbjct: 511 IKTLRTDSGGEY 522
>gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1419
Score = 87.4 bits (215), Expect = 2e-15
Identities = 37/72 (51%), Positives = 48/72 (66%)
Frame = +2
Query: 2 VHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLCHKSEAFQTFIHFKTQVELQCGHK 181
VH D+WGP+P S G+RYY+ FVD FSRYTWIY + H+SE +Q + F + V Q
Sbjct: 697 VHSDVWGPAPFHSKGGHRYYVIFVDDFSRYTWIYFMKHRSELYQVYKSFASMVHTQFSTS 756
Query: 182 IKAIQTDWGGEY 217
IK ++D GGEY
Sbjct: 757 IKNFRSDSGGEY 768
>emb|CAN80715.1| hypothetical protein VITISV_042933 [Vitis vinifera]
Length = 978
Score = 86.7 bits (213), Expect = 3e-15
Identities = 36/72 (50%), Positives = 52/72 (72%)
Frame = +2
Query: 2 VHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLCHKSEAFQTFIHFKTQVELQCGHK 181
VH D+WGPSP+ S G RYYI F+D SR W+Y L +KS+ F+TF +K+ VE++ G K
Sbjct: 281 VHTDLWGPSPVASLGGSRYYITFIDDSSRKVWVYFLKNKSDVFETFKKWKSMVEIETGLK 340
Query: 182 IKAIQTDWGGEY 217
+K +++D GG+Y
Sbjct: 341 VKCLRSDNGGKY 352
>emb|CAN71161.1| hypothetical protein VITISV_009113 [Vitis vinifera]
Length = 1141
Score = 86.7 bits (213), Expect = 3e-15
Identities = 37/72 (51%), Positives = 50/72 (69%)
Frame = +2
Query: 2 VHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLCHKSEAFQTFIHFKTQVELQCGHK 181
VH D+WGPSP+ S G RYYI F+D SR W+Y L +KS+ F+TF +K VE + G K
Sbjct: 410 VHTDLWGPSPVASLGGSRYYITFIDDSSRKVWVYFLKNKSDVFETFKKWKAMVETETGLK 469
Query: 182 IKAIQTDWGGEY 217
+K +++D GGEY
Sbjct: 470 VKCLRSDNGGEY 481
>gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]
Length = 1453
Score = 86.7 bits (213), Expect = 3e-15
Identities = 36/72 (50%), Positives = 50/72 (69%)
Frame = +2
Query: 2 VHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLCHKSEAFQTFIHFKTQVELQCGHK 181
+H D+WGPSP++S G++YY+ FVD +SRY+W Y L KS+ F F+ F+ VE Q K
Sbjct: 518 IHCDLWGPSPVVSKQGFKYYVVFVDDYSRYSWFYPLKAKSDFFAVFVAFQNLVENQFNTK 577
Query: 182 IKAIQTDWGGEY 217
IK Q+D GGE+
Sbjct: 578 IKVFQSDGGGEF 589