BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00055966
         (311 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528638.1| conserved hypothetical protein [Ricinus comm...    75   1e-11
ref|XP_006373929.1| hypothetical protein POPTR_0016s11010g [Popu...    74   2e-11
ref|XP_006594181.1| PREDICTED: putative mediator of RNA polymera...    74   3e-11
ref|XP_003542565.1| PREDICTED: putative mediator of RNA polymera...    74   3e-11
ref|XP_004497590.1| PREDICTED: putative mediator of RNA polymera...    73   4e-11
ref|XP_003590397.1| hypothetical protein MTR_1g061640 [Medicago ...    73   4e-11
ref|XP_002277851.2| PREDICTED: uncharacterized protein LOC100259...    71   1e-10
emb|CBI30220.3| unnamed protein product [Vitis vinifera]               71   1e-10
ref|XP_007145268.1| hypothetical protein PHAVU_007G224600g [Phas...    70   3e-10
ref|NP_001235465.1| SHOOT2 protein [Glycine max] gi|14579399|gb|...    70   3e-10
ref|XP_007027578.1| Sequence-specific DNA binding transcription ...    69   5e-10
ref|XP_007027577.1| Sequence-specific DNA binding transcription ...    69   5e-10
ref|XP_004303047.1| PREDICTED: uncharacterized protein LOC101312...    69   7e-10
ref|XP_004494130.1| PREDICTED: ABC transporter F family member 4...    69   9e-10
ref|XP_006381332.1| hypothetical protein POPTR_0006s11870g [Popu...    68   2e-09
gb|EYU41556.1| hypothetical protein MIMGU_mgv1a006561mg [Mimulus...    67   3e-09
dbj|BAO45883.1| SHOOT2 protein [Acacia mangium]                        66   6e-09
ref|XP_007202030.1| hypothetical protein PRUPE_ppa005148mg [Prun...    64   2e-08
ref|XP_006604609.1| PREDICTED: uncharacterized protein DDB_G0290...    63   4e-08
ref|XP_006604608.1| PREDICTED: uncharacterized protein DDB_G0290...    63   4e-08

>ref|XP_002528638.1| conserved hypothetical protein [Ricinus communis]
           gi|223531927|gb|EEF33741.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 499

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 42/76 (55%), Positives = 50/76 (65%), Gaps = 8/76 (10%)
 Frame = -2

Query: 208 SPQNPQSAQQSIKHNHPSHPLIKPNQQQQAIQSDEDEPE--------DAKKRASPWQRMK 53
           S  NPQS QQS+KH +  +P    N + Q+  SDEDEP         D K++ SPWQRMK
Sbjct: 59  SDHNPQS-QQSVKHAY--NPYSSLNPKPQSPLSDEDEPGFTGDDSTGDGKRKVSPWQRMK 115

Query: 52  WTDNMVRLLIMVVFYI 5
           WTD+MVRLLIM VFYI
Sbjct: 116 WTDSMVRLLIMAVFYI 131


>ref|XP_006373929.1| hypothetical protein POPTR_0016s11010g [Populus trichocarpa]
           gi|550321243|gb|ERP51726.1| hypothetical protein
           POPTR_0016s11010g [Populus trichocarpa]
          Length = 355

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 39/71 (54%), Positives = 46/71 (64%), Gaps = 8/71 (11%)
 Frame = -2

Query: 193 QSAQQSIKHNHPSHPLIKPNQQQQAIQSDEDEPE--------DAKKRASPWQRMKWTDNM 38
           Q +QQS+KH +P     KP Q    + SDEDEP         D K++ SPWQRMKWTD+M
Sbjct: 18  QHSQQSVKHAYPYASSTKPKQLLSPL-SDEDEPSFTGDDNTTDGKRKMSPWQRMKWTDHM 76

Query: 37  VRLLIMVVFYI 5
           VRLLIM VFYI
Sbjct: 77  VRLLIMAVFYI 87


>ref|XP_006594181.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 26-like isoform X2 [Glycine max]
          Length = 469

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 5/73 (6%)
 Frame = -2

Query: 208 SPQNPQSAQQSIKHNHPSHPLIKPNQQQQAIQSDEDEP-----EDAKKRASPWQRMKWTD 44
           +P +P    QSIK  +P  P     +QQQ+  SD+DEP     ED K++ SPWQRMKWTD
Sbjct: 51  NPHHPH-LHQSIKQGYP--PFSSQTKQQQSPLSDDDEPGFPADEDPKRKVSPWQRMKWTD 107

Query: 43  NMVRLLIMVVFYI 5
            MVRLLIM V+YI
Sbjct: 108 TMVRLLIMAVYYI 120


>ref|XP_003542565.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 26-like isoform X1 [Glycine max]
          Length = 478

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 5/73 (6%)
 Frame = -2

Query: 208 SPQNPQSAQQSIKHNHPSHPLIKPNQQQQAIQSDEDEP-----EDAKKRASPWQRMKWTD 44
           +P +P    QSIK  +P  P     +QQQ+  SD+DEP     ED K++ SPWQRMKWTD
Sbjct: 60  NPHHPH-LHQSIKQGYP--PFSSQTKQQQSPLSDDDEPGFPADEDPKRKVSPWQRMKWTD 116

Query: 43  NMVRLLIMVVFYI 5
            MVRLLIM V+YI
Sbjct: 117 TMVRLLIMAVYYI 129


>ref|XP_004497590.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 26-like [Cicer arietinum]
          Length = 507

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 42/79 (53%), Positives = 48/79 (60%), Gaps = 16/79 (20%)
 Frame = -2

Query: 193 QSAQQSIKHNHP----SHPLIKPNQQQQAIQS---DEDEPE---------DAKKRASPWQ 62
           Q  QQ IKH +P    S+  IK  QQQQ+  S   DEDEP          D K++ SPWQ
Sbjct: 65  QQLQQPIKHGYPPFSSSNSKIKQQQQQQSSHSQLSDEDEPNFPAEESSGGDPKRKISPWQ 124

Query: 61  RMKWTDNMVRLLIMVVFYI 5
           RMKWTD MVRLLIM V+YI
Sbjct: 125 RMKWTDTMVRLLIMAVYYI 143


>ref|XP_003590397.1| hypothetical protein MTR_1g061640 [Medicago truncatula]
           gi|140052425|gb|ABE80120.2| Homeodomain-like [Medicago
           truncatula] gi|355479445|gb|AES60648.1| hypothetical
           protein MTR_1g061640 [Medicago truncatula]
          Length = 496

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 42/87 (48%), Positives = 52/87 (59%), Gaps = 15/87 (17%)
 Frame = -2

Query: 220 MLSFSPQNP-----QSAQQSIKHNHPSHPLIKPNQQQQAIQ-SDEDEPE---------DA 86
           ++S++PQ+      Q    S+KH  P     K  QQQQ+ Q SDEDEP          D 
Sbjct: 53  VVSYAPQHHDTDTNQHHHHSMKHGFPPFSSSKNKQQQQSSQMSDEDEPNFPAEESSGGDP 112

Query: 85  KKRASPWQRMKWTDNMVRLLIMVVFYI 5
           K++ SPWQRMKWTD MVRLLIM V+YI
Sbjct: 113 KRKISPWQRMKWTDTMVRLLIMAVYYI 139


>ref|XP_002277851.2| PREDICTED: uncharacterized protein LOC100259589 [Vitis vinifera]
          Length = 470

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 38/75 (50%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
 Frame = -2

Query: 205 PQNPQSAQQSIKHNHPSHPLIKPNQQQQAIQSDEDEP--------EDAKKRASPWQRMKW 50
           P +   +QQ +KH +P     K    QQ   SDEDEP         D K++ SPW RMKW
Sbjct: 38  PDHHSQSQQPVKHGYPYVTKAK----QQLTLSDEDEPGLTGDDSTADGKRKVSPWHRMKW 93

Query: 49  TDNMVRLLIMVVFYI 5
           TDNMVRLLIM VFYI
Sbjct: 94  TDNMVRLLIMAVFYI 108


>emb|CBI30220.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 38/75 (50%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
 Frame = -2

Query: 205 PQNPQSAQQSIKHNHPSHPLIKPNQQQQAIQSDEDEP--------EDAKKRASPWQRMKW 50
           P +   +QQ +KH +P     K    QQ   SDEDEP         D K++ SPW RMKW
Sbjct: 43  PDHHSQSQQPVKHGYPYVTKAK----QQLTLSDEDEPGLTGDDSTADGKRKVSPWHRMKW 98

Query: 49  TDNMVRLLIMVVFYI 5
           TDNMVRLLIM VFYI
Sbjct: 99  TDNMVRLLIMAVFYI 113


>ref|XP_007145268.1| hypothetical protein PHAVU_007G224600g [Phaseolus vulgaris]
           gi|561018458|gb|ESW17262.1| hypothetical protein
           PHAVU_007G224600g [Phaseolus vulgaris]
          Length = 473

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 37/68 (54%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = -2

Query: 205 PQNPQSAQQSIKHNHPSHPLIKPNQQQQAIQSDEDEP-EDAKKRASPWQRMKWTDNMVRL 29
           P +P    QSIK  +P +   K  QQQ +  SDED+   D KK+ S WQRMKWTD MVRL
Sbjct: 54  PHHPHH-NQSIKQGYPPYSSAKTKQQQHSGLSDEDDDTSDPKKKVSLWQRMKWTDTMVRL 112

Query: 28  LIMVVFYI 5
           LIM V+YI
Sbjct: 113 LIMAVYYI 120


>ref|NP_001235465.1| SHOOT2 protein [Glycine max] gi|14579399|gb|AAK69274.1| unknown
           [Glycine max]
          Length = 408

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 39/69 (56%), Positives = 46/69 (66%), Gaps = 6/69 (8%)
 Frame = -2

Query: 193 QSAQQSIKHNHP-SHPLIKPNQQQQAIQSDEDEP-----EDAKKRASPWQRMKWTDNMVR 32
           Q  QQ IKH +  SH      +QQQ+  SD+DEP     ED K++ SPWQRMKWTD MVR
Sbjct: 17  QPPQQPIKHGYLFSHQ----TKQQQSPLSDDDEPGFPADEDPKRKVSPWQRMKWTDTMVR 72

Query: 31  LLIMVVFYI 5
           LLIM V+YI
Sbjct: 73  LLIMAVYYI 81


>ref|XP_007027578.1| Sequence-specific DNA binding transcription factors isoform 2
           [Theobroma cacao] gi|508716183|gb|EOY08080.1|
           Sequence-specific DNA binding transcription factors
           isoform 2 [Theobroma cacao]
          Length = 474

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 43/96 (44%), Positives = 53/96 (55%), Gaps = 29/96 (30%)
 Frame = -2

Query: 205 PQNPQSAQQSIK-HNHPSHPLIK-----PNQQQQAIQ---------------SDEDEP-- 95
           PQNPQSAQ   + H+HP            +Q QQ+++               SDEDEP  
Sbjct: 25  PQNPQSAQNPHQLHHHPQMVAYSLHETDHSQHQQSVKQGYPFASKTKQLSPLSDEDEPGF 84

Query: 94  ------EDAKKRASPWQRMKWTDNMVRLLIMVVFYI 5
                  DAK++ SPWQRMKWTD+MVRLLIM V+YI
Sbjct: 85  TPDDGAADAKRKISPWQRMKWTDSMVRLLIMAVYYI 120


>ref|XP_007027577.1| Sequence-specific DNA binding transcription factors isoform 1
           [Theobroma cacao] gi|508716182|gb|EOY08079.1|
           Sequence-specific DNA binding transcription factors
           isoform 1 [Theobroma cacao]
          Length = 537

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 43/96 (44%), Positives = 53/96 (55%), Gaps = 29/96 (30%)
 Frame = -2

Query: 205 PQNPQSAQQSIK-HNHPSHPLIK-----PNQQQQAIQ---------------SDEDEP-- 95
           PQNPQSAQ   + H+HP            +Q QQ+++               SDEDEP  
Sbjct: 88  PQNPQSAQNPHQLHHHPQMVAYSLHETDHSQHQQSVKQGYPFASKTKQLSPLSDEDEPGF 147

Query: 94  ------EDAKKRASPWQRMKWTDNMVRLLIMVVFYI 5
                  DAK++ SPWQRMKWTD+MVRLLIM V+YI
Sbjct: 148 TPDDGAADAKRKISPWQRMKWTDSMVRLLIMAVYYI 183


>ref|XP_004303047.1| PREDICTED: uncharacterized protein LOC101312168 [Fragaria vesca
           subsp. vesca]
          Length = 489

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 41/73 (56%), Positives = 47/73 (64%), Gaps = 8/73 (10%)
 Frame = -2

Query: 199 NPQSAQQSIKHNHPSHPLIKPNQQQQAIQSDEDEPE--------DAKKRASPWQRMKWTD 44
           +PQ AQQS+KH +P     KP   +Q   SDEDEP         D K++ SPWQRMKWTD
Sbjct: 59  HPQ-AQQSVKHGYPY--AAKP---KQITLSDEDEPGFGADDSAGDNKRKISPWQRMKWTD 112

Query: 43  NMVRLLIMVVFYI 5
            MVRLLIM VFYI
Sbjct: 113 TMVRLLIMAVFYI 125


>ref|XP_004494130.1| PREDICTED: ABC transporter F family member 4-like [Cicer arietinum]
          Length = 451

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 39/81 (48%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
 Frame = -2

Query: 220 MLSFSPQNPQSAQQSIKHNHPSHPLIKPNQQQQAIQSDEDEP---------EDAKKRASP 68
           M+S++  N     Q IK N+P     K N+ QQ   SDEDEP          D K++ SP
Sbjct: 46  MVSYT--NHHDNDQPIKQNYPYSS--KTNKPQQITLSDEDEPCFGAEETTSSDPKRKGSP 101

Query: 67  WQRMKWTDNMVRLLIMVVFYI 5
           W RMKWTD+MVRLLIM V+YI
Sbjct: 102 WHRMKWTDSMVRLLIMAVYYI 122


>ref|XP_006381332.1| hypothetical protein POPTR_0006s11870g [Populus trichocarpa]
           gi|550336034|gb|ERP59129.1| hypothetical protein
           POPTR_0006s11870g [Populus trichocarpa]
          Length = 496

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 36/71 (50%), Positives = 44/71 (61%), Gaps = 8/71 (11%)
 Frame = -2

Query: 193 QSAQQSIKHNHPSHPLIKPNQQQQAIQSDEDEPE--------DAKKRASPWQRMKWTDNM 38
           Q +QQS KH   ++P      +Q +  S+EDEP         D  ++ SPWQRMKWTDNM
Sbjct: 54  QHSQQSAKH---AYPFASTKPKQLSPLSNEDEPSFTGDDSTTDGNRKISPWQRMKWTDNM 110

Query: 37  VRLLIMVVFYI 5
           VRLLIM VFYI
Sbjct: 111 VRLLIMAVFYI 121


>gb|EYU41556.1| hypothetical protein MIMGU_mgv1a006561mg [Mimulus guttatus]
          Length = 439

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 36/74 (48%), Positives = 46/74 (62%), Gaps = 9/74 (12%)
 Frame = -2

Query: 199 NPQSAQQSIKHNHPSHPLIKPNQQQQAIQSDEDEP---------EDAKKRASPWQRMKWT 47
           +PQ+ QQ  K N  ++P    ++ Q    SD+DEP         +  +K  SPWQRMKWT
Sbjct: 70  HPQTQQQPPKQN--TYPSAPKSKTQPLTLSDDDEPGFAADNSADDGKRKMTSPWQRMKWT 127

Query: 46  DNMVRLLIMVVFYI 5
           DNMV+LLIMVVFYI
Sbjct: 128 DNMVKLLIMVVFYI 141


>dbj|BAO45883.1| SHOOT2 protein [Acacia mangium]
          Length = 453

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 37/81 (45%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
 Frame = -2

Query: 220 MLSFSPQNPQSAQQSIKHNHPSHPLIKPNQQQQAIQSDEDEPEDA---------KKRASP 68
           M+S++  +        KH    +P    N QQ A  SDE+EPE A          K  SP
Sbjct: 47  MVSYATHHDLDPHSQTKHG--GYPYSTKNTQQTAPLSDEEEPEFAADDSSGDPKSKNTSP 104

Query: 67  WQRMKWTDNMVRLLIMVVFYI 5
           WQRMKWTD MVRLLIM V+YI
Sbjct: 105 WQRMKWTDTMVRLLIMAVYYI 125


>ref|XP_007202030.1| hypothetical protein PRUPE_ppa005148mg [Prunus persica]
           gi|462397561|gb|EMJ03229.1| hypothetical protein
           PRUPE_ppa005148mg [Prunus persica]
          Length = 475

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 35/76 (46%), Positives = 43/76 (56%), Gaps = 9/76 (11%)
 Frame = -2

Query: 205 PQNPQSAQQSIKHNHPSHPLIKPNQQQQAIQSDEDEPE---------DAKKRASPWQRMK 53
           P + Q   QS+K  +P        + +Q   SD+DEP          D K++ SPWQRMK
Sbjct: 45  PDHHQHPHQSVKQGYPF-----ATKSKQIALSDDDEPGFGADDNSNGDNKRKISPWQRMK 99

Query: 52  WTDNMVRLLIMVVFYI 5
           WTD MVRLLIM VFYI
Sbjct: 100 WTDTMVRLLIMAVFYI 115


>ref|XP_006604609.1| PREDICTED: uncharacterized protein DDB_G0290301 isoform X2 [Glycine
           max]
          Length = 403

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 35/72 (48%), Positives = 44/72 (61%), Gaps = 9/72 (12%)
 Frame = -2

Query: 193 QSAQQSIKHNHPSHPLIKPNQQQQAIQSDEDEPE---------DAKKRASPWQRMKWTDN 41
           Q  QQ IKH + +   IK ++ Q  + SDEDEP          D K++ SPW RMKWTD 
Sbjct: 17  QPPQQPIKHGY-NFSAIKSSKSQSTL-SDEDEPVFTAEDNSSGDPKRKVSPWHRMKWTDT 74

Query: 40  MVRLLIMVVFYI 5
           MV+LLIM V+YI
Sbjct: 75  MVKLLIMAVYYI 86


>ref|XP_006604608.1| PREDICTED: uncharacterized protein DDB_G0290301 isoform X1 [Glycine
           max]
          Length = 452

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 35/72 (48%), Positives = 44/72 (61%), Gaps = 9/72 (12%)
 Frame = -2

Query: 193 QSAQQSIKHNHPSHPLIKPNQQQQAIQSDEDEPE---------DAKKRASPWQRMKWTDN 41
           Q  QQ IKH + +   IK ++ Q  + SDEDEP          D K++ SPW RMKWTD 
Sbjct: 66  QPPQQPIKHGY-NFSAIKSSKSQSTL-SDEDEPVFTAEDNSSGDPKRKVSPWHRMKWTDT 123

Query: 40  MVRLLIMVVFYI 5
           MV+LLIM V+YI
Sbjct: 124 MVKLLIMAVYYI 135