BLASTX nr result
ID: Cocculus23_contig00055923
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00055923
(334 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007013686.1| RING/U-box superfamily protein [Theobroma ca... 83 3e-14
emb|CBI25596.3| unnamed protein product [Vitis vinifera] 81 1e-13
ref|XP_002266038.1| PREDICTED: E3 ubiquitin-protein ligase arkad... 81 1e-13
emb|CAN73727.1| hypothetical protein VITISV_034074 [Vitis vinifera] 81 1e-13
ref|XP_004242706.1| PREDICTED: uncharacterized protein LOC101250... 79 9e-13
ref|XP_006359529.1| PREDICTED: uncharacterized protein LOC102590... 78 1e-12
gb|AFK38095.1| unknown [Lotus japonicus] 74 2e-11
gb|AFK42549.1| unknown [Lotus japonicus] 72 8e-11
ref|XP_004287232.1| PREDICTED: uncharacterized protein LOC101295... 70 3e-10
ref|XP_004146704.1| PREDICTED: uncharacterized protein LOC101215... 69 5e-10
ref|XP_006372131.1| hypothetical protein POPTR_0018s12240g [Popu... 69 9e-10
ref|XP_007202613.1| hypothetical protein PRUPE_ppa011840mg [Prun... 69 9e-10
ref|XP_002324572.1| zinc finger family protein [Populus trichoca... 69 9e-10
gb|EXB87680.1| Zinc/RING finger protein 3 [Morus notabilis] 68 2e-09
ref|NP_001238250.1| uncharacterized protein LOC100527583 [Glycin... 68 2e-09
ref|XP_004139268.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 67 3e-09
ref|XP_002309314.1| zinc finger family protein [Populus trichoca... 65 8e-09
ref|XP_006473942.1| PREDICTED: uncharacterized protein LOC102616... 64 2e-08
ref|XP_006453710.1| hypothetical protein CICLE_v10009499mg [Citr... 64 3e-08
ref|NP_001189531.1| RING/U-box domain-containing protein [Arabid... 60 2e-07
>ref|XP_007013686.1| RING/U-box superfamily protein [Theobroma cacao]
gi|508784049|gb|EOY31305.1| RING/U-box superfamily
protein [Theobroma cacao]
Length = 191
Score = 83.2 bits (204), Expect = 3e-14
Identities = 44/69 (63%), Positives = 48/69 (69%)
Frame = +2
Query: 128 MAGMLPGVECARRRRFHQGGGWMKPQSVMGNGRTRHSTFCLYTSNHEAYLSSSSFMQRNT 307
MAGMLPGVECARRRRFHQ GG S + G TR S+FCLYTSNHE + SS S QR+
Sbjct: 1 MAGMLPGVECARRRRFHQSGGASDSPSTVPIGWTRRSSFCLYTSNHETHHSSVSSQQRSI 60
Query: 308 LQMHNSQDE 334
L N QDE
Sbjct: 61 LNQAN-QDE 68
>emb|CBI25596.3| unnamed protein product [Vitis vinifera]
Length = 118
Score = 81.3 bits (199), Expect = 1e-13
Identities = 42/70 (60%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Frame = +2
Query: 128 MAGMLPGVECARRRRFHQGGGWMKPQSVMGNGRTRHSTFCLYTSNHE-AYLSSSSFMQRN 304
MAGMLPGVECARRRRFHQ GG +V +G TR S+FCLYTSNHE + +SSS MQR+
Sbjct: 1 MAGMLPGVECARRRRFHQSGGCSDSPTVAVHGCTRRSSFCLYTSNHENHHATSSSSMQRS 60
Query: 305 TLQMHNSQDE 334
L S ++
Sbjct: 61 VLNQAYSDEK 70
>ref|XP_002266038.1| PREDICTED: E3 ubiquitin-protein ligase arkadia-like isoform 1
[Vitis vinifera]
Length = 193
Score = 81.3 bits (199), Expect = 1e-13
Identities = 42/70 (60%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Frame = +2
Query: 128 MAGMLPGVECARRRRFHQGGGWMKPQSVMGNGRTRHSTFCLYTSNHE-AYLSSSSFMQRN 304
MAGMLPGVECARRRRFHQ GG +V +G TR S+FCLYTSNHE + +SSS MQR+
Sbjct: 1 MAGMLPGVECARRRRFHQSGGCSDSPTVAVHGCTRRSSFCLYTSNHENHHATSSSSMQRS 60
Query: 305 TLQMHNSQDE 334
L S ++
Sbjct: 61 VLNQAYSDEK 70
>emb|CAN73727.1| hypothetical protein VITISV_034074 [Vitis vinifera]
Length = 193
Score = 81.3 bits (199), Expect = 1e-13
Identities = 42/70 (60%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Frame = +2
Query: 128 MAGMLPGVECARRRRFHQGGGWMKPQSVMGNGRTRHSTFCLYTSNHE-AYLSSSSFMQRN 304
MAGMLPGVECARRRRFHQ GG +V +G TR S+FCLYTSNHE + +SSS MQR+
Sbjct: 1 MAGMLPGVECARRRRFHQSGGCSDSPTVAVHGCTRRSSFCLYTSNHENHHATSSSSMQRS 60
Query: 305 TLQMHNSQDE 334
L S ++
Sbjct: 61 VLNQAYSDEK 70
>ref|XP_004242706.1| PREDICTED: uncharacterized protein LOC101250706 [Solanum
lycopersicum]
Length = 198
Score = 78.6 bits (192), Expect = 9e-13
Identities = 37/61 (60%), Positives = 43/61 (70%)
Frame = +2
Query: 128 MAGMLPGVECARRRRFHQGGGWMKPQSVMGNGRTRHSTFCLYTSNHEAYLSSSSFMQRNT 307
MAGMLPGVECARRRRFHQ G + + TR S+FCLYTSNHE +L+SSS QR
Sbjct: 1 MAGMLPGVECARRRRFHQSNGCIDSSNTSSFSSTRRSSFCLYTSNHEHHLNSSSSKQRGV 60
Query: 308 L 310
+
Sbjct: 61 I 61
>ref|XP_006359529.1| PREDICTED: uncharacterized protein LOC102590358 [Solanum tuberosum]
Length = 198
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/58 (65%), Positives = 42/58 (72%)
Frame = +2
Query: 128 MAGMLPGVECARRRRFHQGGGWMKPQSVMGNGRTRHSTFCLYTSNHEAYLSSSSFMQR 301
MAGMLPGVECARRRRFHQ G + + G TR S+FCLYTSNHE L+SSS QR
Sbjct: 1 MAGMLPGVECARRRRFHQSSGCIDSSNTTGFSSTRRSSFCLYTSNHEHPLNSSSSKQR 58
>gb|AFK38095.1| unknown [Lotus japonicus]
Length = 183
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/61 (59%), Positives = 44/61 (72%)
Frame = +2
Query: 128 MAGMLPGVECARRRRFHQGGGWMKPQSVMGNGRTRHSTFCLYTSNHEAYLSSSSFMQRNT 307
MAGMLPGVE ARRRRFH+ GG + + + TR S+FCLY SNHE+ +SSSS +QR
Sbjct: 1 MAGMLPGVESARRRRFHKSGGCLDGPLLAPHNPTRRSSFCLYASNHESRISSSSSLQRGL 60
Query: 308 L 310
L
Sbjct: 61 L 61
>gb|AFK42549.1| unknown [Lotus japonicus]
Length = 183
Score = 72.0 bits (175), Expect = 8e-11
Identities = 35/61 (57%), Positives = 44/61 (72%)
Frame = +2
Query: 128 MAGMLPGVECARRRRFHQGGGWMKPQSVMGNGRTRHSTFCLYTSNHEAYLSSSSFMQRNT 307
MAGMLPGVE ARRRRFH+ GG + + + TR S+FCLY SN+E+ +SSSS +QR
Sbjct: 1 MAGMLPGVESARRRRFHKSGGCLDGPLLAPHNSTRRSSFCLYASNNESRISSSSSLQRGL 60
Query: 308 L 310
L
Sbjct: 61 L 61
>ref|XP_004287232.1| PREDICTED: uncharacterized protein LOC101295556 [Fragaria vesca
subsp. vesca]
Length = 202
Score = 70.1 bits (170), Expect = 3e-10
Identities = 36/69 (52%), Positives = 44/69 (63%)
Frame = +2
Query: 128 MAGMLPGVECARRRRFHQGGGWMKPQSVMGNGRTRHSTFCLYTSNHEAYLSSSSFMQRNT 307
MAGMLPGVECARRRR HQ P NG TR S+FCLY SN+E + +S+ +QR+
Sbjct: 1 MAGMLPGVECARRRRVHQSS--ESPNPANTNGCTRRSSFCLYASNNETHQTSTFSLQRSK 58
Query: 308 LQMHNSQDE 334
L + DE
Sbjct: 59 LNQASYMDE 67
>ref|XP_004146704.1| PREDICTED: uncharacterized protein LOC101215379 [Cucumis sativus]
gi|449505387|ref|XP_004162453.1| PREDICTED:
uncharacterized protein LOC101226302 [Cucumis sativus]
Length = 130
Score = 69.3 bits (168), Expect = 5e-10
Identities = 35/69 (50%), Positives = 40/69 (57%)
Frame = +2
Query: 128 MAGMLPGVECARRRRFHQGGGWMKPQSVMGNGRTRHSTFCLYTSNHEAYLSSSSFMQRNT 307
MAG LPGVECARRRR HQ W + TR S CLYTSN+EA L S+ M+R
Sbjct: 1 MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRL 60
Query: 308 LQMHNSQDE 334
L +DE
Sbjct: 61 LMEAEGEDE 69
>ref|XP_006372131.1| hypothetical protein POPTR_0018s12240g [Populus trichocarpa]
gi|550318575|gb|ERP49928.1| hypothetical protein
POPTR_0018s12240g [Populus trichocarpa]
Length = 197
Score = 68.6 bits (166), Expect = 9e-10
Identities = 35/67 (52%), Positives = 45/67 (67%)
Frame = +2
Query: 128 MAGMLPGVECARRRRFHQGGGWMKPQSVMGNGRTRHSTFCLYTSNHEAYLSSSSFMQRNT 307
MAGMLPGVECARRRRFHQ G + +G +R +FCLYTS+HE+Y S S +Q+
Sbjct: 1 MAGMLPGVECARRRRFHQSGDSL---GAPAHGWSRKPSFCLYTSSHESYHGSVSSLQKQK 57
Query: 308 LQMHNSQ 328
+ +SQ
Sbjct: 58 QRSVSSQ 64
>ref|XP_007202613.1| hypothetical protein PRUPE_ppa011840mg [Prunus persica]
gi|595807474|ref|XP_007202614.1| hypothetical protein
PRUPE_ppa011840mg [Prunus persica]
gi|462398144|gb|EMJ03812.1| hypothetical protein
PRUPE_ppa011840mg [Prunus persica]
gi|462398145|gb|EMJ03813.1| hypothetical protein
PRUPE_ppa011840mg [Prunus persica]
Length = 193
Score = 68.6 bits (166), Expect = 9e-10
Identities = 35/61 (57%), Positives = 43/61 (70%)
Frame = +2
Query: 128 MAGMLPGVECARRRRFHQGGGWMKPQSVMGNGRTRHSTFCLYTSNHEAYLSSSSFMQRNT 307
MAGMLPGVECARRRR HQ G + V +G TR S+FCLY SNHE + +S+ +QR+
Sbjct: 1 MAGMLPGVECARRRRVHQSG---ESPGVGTHGWTRRSSFCLYASNHETHHTSTFSLQRSI 57
Query: 308 L 310
L
Sbjct: 58 L 58
>ref|XP_002324572.1| zinc finger family protein [Populus trichocarpa]
gi|222866006|gb|EEF03137.1| zinc finger family protein
[Populus trichocarpa]
Length = 190
Score = 68.6 bits (166), Expect = 9e-10
Identities = 34/59 (57%), Positives = 42/59 (71%)
Frame = +2
Query: 128 MAGMLPGVECARRRRFHQGGGWMKPQSVMGNGRTRHSTFCLYTSNHEAYLSSSSFMQRN 304
MAGMLPGVECARRRRFHQ G + +G +R +FCLYTS+HE+Y S S +QR+
Sbjct: 1 MAGMLPGVECARRRRFHQSGDSL---GAPAHGWSRKPSFCLYTSSHESYHGSVSSLQRS 56
>gb|EXB87680.1| Zinc/RING finger protein 3 [Morus notabilis]
Length = 191
Score = 67.8 bits (164), Expect = 2e-09
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Frame = +2
Query: 128 MAGMLPGVECARRRRFHQGGGWMKPQSVMGNGRTRHSTFCLYTSNHEA--YLSSSSFMQR 301
MAGMLPGVECARRRR HQ GG S G TR +FCLYTSN+E +++S+ M
Sbjct: 1 MAGMLPGVECARRRRCHQSGGSSDSLSAPAYGWTRRPSFCLYTSNNEKTHHITSTFLMGS 60
Query: 302 NTLQMHNSQDE 334
+ Q++ D+
Sbjct: 61 MSTQVYQDDDD 71
>ref|NP_001238250.1| uncharacterized protein LOC100527583 [Glycine max]
gi|255632685|gb|ACU16694.1| unknown [Glycine max]
Length = 202
Score = 67.8 bits (164), Expect = 2e-09
Identities = 36/61 (59%), Positives = 42/61 (68%)
Frame = +2
Query: 128 MAGMLPGVECARRRRFHQGGGWMKPQSVMGNGRTRHSTFCLYTSNHEAYLSSSSFMQRNT 307
MAGMLPGVECARRRR H+ S+ + TR S+FCLYTSNHE LS SS +QR+
Sbjct: 15 MAGMLPGVECARRRRLHRCLD-SNSTSLTSHASTRRSSFCLYTSNHECRLSLSSSLQRSM 73
Query: 308 L 310
L
Sbjct: 74 L 74
>ref|XP_004139268.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
gi|449493673|ref|XP_004159405.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 201
Score = 67.0 bits (162), Expect = 3e-09
Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Frame = +2
Query: 128 MAGMLPGVECARRRRFHQG-GGWMKPQSVMGNGRTRHSTFCLYTSNHEAYLSSSSFMQRN 304
MAGMLPGVECARRRRFHQ P + +G TR +FCLYTSN + +L SSS Q+
Sbjct: 1 MAGMLPGVECARRRRFHQSINSSDSPFTAGKSGSTRRPSFCLYTSNRDFHLISSSSSQQR 60
Query: 305 TLQMHNSQDE 334
+L Q++
Sbjct: 61 SLTNQAYQND 70
>ref|XP_002309314.1| zinc finger family protein [Populus trichocarpa]
gi|222855290|gb|EEE92837.1| zinc finger family protein
[Populus trichocarpa]
Length = 202
Score = 65.5 bits (158), Expect = 8e-09
Identities = 33/61 (54%), Positives = 42/61 (68%)
Frame = +2
Query: 128 MAGMLPGVECARRRRFHQGGGWMKPQSVMGNGRTRHSTFCLYTSNHEAYLSSSSFMQRNT 307
MAG+LPGVECARRRRFH+ G + +G TR +FCLYTS+HE + S S +QR+
Sbjct: 1 MAGVLPGVECARRRRFHRSGDSL---GAPAHGWTRRPSFCLYTSSHENHHGSISSLQRSI 57
Query: 308 L 310
L
Sbjct: 58 L 58
>ref|XP_006473942.1| PREDICTED: uncharacterized protein LOC102616965 [Citrus sinensis]
Length = 207
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/61 (54%), Positives = 39/61 (63%), Gaps = 8/61 (13%)
Frame = +2
Query: 128 MAGMLPGVECARRRRFHQGGGWMK--------PQSVMGNGRTRHSTFCLYTSNHEAYLSS 283
MAGMLPGVECARRRR HQ GG S M +R S+FCLYTS+HE++ +S
Sbjct: 1 MAGMLPGVECARRRRIHQSGGGCSSASDGLTPTSSSMSMSMSRRSSFCLYTSSHESHHTS 60
Query: 284 S 286
S
Sbjct: 61 S 61
>ref|XP_006453710.1| hypothetical protein CICLE_v10009499mg [Citrus clementina]
gi|567923410|ref|XP_006453711.1| hypothetical protein
CICLE_v10009499mg [Citrus clementina]
gi|557556936|gb|ESR66950.1| hypothetical protein
CICLE_v10009499mg [Citrus clementina]
gi|557556937|gb|ESR66951.1| hypothetical protein
CICLE_v10009499mg [Citrus clementina]
Length = 207
Score = 63.5 bits (153), Expect = 3e-08
Identities = 33/61 (54%), Positives = 39/61 (63%), Gaps = 8/61 (13%)
Frame = +2
Query: 128 MAGMLPGVECARRRRFHQGGGWMKPQ--------SVMGNGRTRHSTFCLYTSNHEAYLSS 283
MAGMLPGVECARRRR HQ GG S M +R S+FCLYTS+HE++ +S
Sbjct: 1 MAGMLPGVECARRRRIHQSGGGCSSASDGLAPTWSSMSMSMSRRSSFCLYTSSHESHHTS 60
Query: 284 S 286
S
Sbjct: 61 S 61
>ref|NP_001189531.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|330251326|gb|AEC06420.1| RING/U-box domain-containing
protein [Arabidopsis thaliana]
Length = 130
Score = 60.5 bits (145), Expect = 2e-07
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
Frame = +2
Query: 128 MAGMLPGVECARRRRFHQGGGWMKPQ------SVMGNGRTRHSTFCLYTSNHEAYLSSSS 289
MAGMLPGVECARRRRFH G ++ + G+ TR +F LYT+NHE++ + S
Sbjct: 1 MAGMLPGVECARRRRFHGGAPPIESSNTASVAAAAGHVWTRRPSFSLYTTNHESHQAHVS 60
Query: 290 FMQRNTLQMHNSQD 331
F +R+ +D
Sbjct: 61 FSERSVRNKSYGED 74