BLASTX nr result
ID: Cocculus23_contig00055851
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00055851
(253 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006476151.1| PREDICTED: DNA polymerase theta-like isoform... 98 1e-18
ref|XP_006450613.1| hypothetical protein CICLE_v100072282mg, par... 97 2e-18
ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus comm... 96 5e-18
ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycin... 96 7e-18
ref|XP_006412440.1| hypothetical protein EUTSA_v10024191mg [Eutr... 95 1e-17
ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp.... 94 1e-17
ref|NP_001078482.1| MUS308 and mammalian DNA polymerase-like pro... 94 1e-17
ref|XP_007226676.1| hypothetical protein PRUPE_ppa020963mg [Prun... 94 3e-17
ref|XP_006282845.1| hypothetical protein CARUB_v10006788mg [Caps... 92 7e-17
ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymera... 92 7e-17
emb|CBI20904.3| unnamed protein product [Vitis vinifera] 92 7e-17
ref|XP_002324822.2| hypothetical protein POPTR_0018s00860g [Popu... 92 1e-16
ref|XP_006837921.1| hypothetical protein AMTR_s00218p00019950 [A... 91 2e-16
ref|XP_004962606.1| PREDICTED: DNA polymerase theta-like isoform... 90 3e-16
ref|XP_004292864.1| PREDICTED: DNA polymerase theta-like [Fragar... 90 3e-16
ref|XP_004498542.1| PREDICTED: DNA polymerase theta-like [Cicer ... 89 6e-16
ref|XP_003588560.1| DNA polymerase I family protein expressed [M... 89 8e-16
ref|XP_006356662.1| PREDICTED: DNA polymerase theta-like [Solanu... 87 2e-15
ref|XP_004245418.1| PREDICTED: DNA polymerase theta-like [Solanu... 87 2e-15
gb|EEE53068.1| hypothetical protein OsJ_35810 [Oryza sativa Japo... 87 3e-15
>ref|XP_006476151.1| PREDICTED: DNA polymerase theta-like isoform X1 [Citrus sinensis]
gi|568844552|ref|XP_006476152.1| PREDICTED: DNA
polymerase theta-like isoform X2 [Citrus sinensis]
Length = 2191
Score = 97.8 bits (242), Expect = 1e-18
Identities = 50/81 (61%), Positives = 55/81 (67%)
Frame = +1
Query: 10 IRSPLVTDHTYDGVGTPXXXXXXXXXXXXXXXXPSEICSIYMKRGISKLYPWQVNCLRVD 189
I+ P+ + + D GTP PSEICSIY KRGISKLYPWQV CL VD
Sbjct: 478 IKKPVGNEKS-DEAGTPSSSGMLKDCLDLSSWLPSEICSIYKKRGISKLYPWQVECLHVD 536
Query: 190 GVLQKRNLVYCASTSAGKSFV 252
GVLQ+RNLVYCASTSAGKSFV
Sbjct: 537 GVLQRRNLVYCASTSAGKSFV 557
>ref|XP_006450613.1| hypothetical protein CICLE_v100072282mg, partial [Citrus
clementina] gi|557553839|gb|ESR63853.1| hypothetical
protein CICLE_v100072282mg, partial [Citrus clementina]
Length = 1810
Score = 97.4 bits (241), Expect = 2e-18
Identities = 48/70 (68%), Positives = 49/70 (70%)
Frame = +1
Query: 43 DGVGTPXXXXXXXXXXXXXXXXPSEICSIYMKRGISKLYPWQVNCLRVDGVLQKRNLVYC 222
D GTP PSEICSIY KRGISKLYPWQV CL VDGVLQ+RNLVYC
Sbjct: 488 DEAGTPSSSGMLKDCLDLSSWLPSEICSIYKKRGISKLYPWQVECLHVDGVLQRRNLVYC 547
Query: 223 ASTSAGKSFV 252
ASTSAGKSFV
Sbjct: 548 ASTSAGKSFV 557
>ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus communis]
gi|223544402|gb|EEF45923.1| DNA polymerase theta,
putative [Ricinus communis]
Length = 2154
Score = 95.9 bits (237), Expect = 5e-18
Identities = 47/82 (57%), Positives = 57/82 (69%)
Frame = +1
Query: 7 DIRSPLVTDHTYDGVGTPXXXXXXXXXXXXXXXXPSEICSIYMKRGISKLYPWQVNCLRV 186
+IR+P+ + Y TP P+E+CSIY +RGISKLYPWQV+CL+V
Sbjct: 459 EIRNPVAS--AYGEADTPSSFVPLKDRLDLVNWLPAEVCSIYKRRGISKLYPWQVDCLQV 516
Query: 187 DGVLQKRNLVYCASTSAGKSFV 252
DGVLQ+RNLVYCASTSAGKSFV
Sbjct: 517 DGVLQRRNLVYCASTSAGKSFV 538
>ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycine max]
Length = 2147
Score = 95.5 bits (236), Expect = 7e-18
Identities = 47/82 (57%), Positives = 56/82 (68%)
Frame = +1
Query: 7 DIRSPLVTDHTYDGVGTPXXXXXXXXXXXXXXXXPSEICSIYMKRGISKLYPWQVNCLRV 186
++R+P ++ H D TP P EICSIY K+GIS+LY WQV+CLRV
Sbjct: 441 EVRTP-ISAHASDEASTPSTSVSLNDHFDLNSWLPPEICSIYRKKGISRLYSWQVDCLRV 499
Query: 187 DGVLQKRNLVYCASTSAGKSFV 252
DGVLQ+RNLVYCASTSAGKSFV
Sbjct: 500 DGVLQRRNLVYCASTSAGKSFV 521
>ref|XP_006412440.1| hypothetical protein EUTSA_v10024191mg [Eutrema salsugineum]
gi|557113610|gb|ESQ53893.1| hypothetical protein
EUTSA_v10024191mg [Eutrema salsugineum]
Length = 1908
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/48 (89%), Positives = 46/48 (95%)
Frame = +1
Query: 109 PSEICSIYMKRGISKLYPWQVNCLRVDGVLQKRNLVYCASTSAGKSFV 252
PSEICS+Y K+GISKLYPWQV CL+VDGVLQKRNLVYCASTSAGKSFV
Sbjct: 253 PSEICSVYNKKGISKLYPWQVECLQVDGVLQKRNLVYCASTSAGKSFV 300
>ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315090|gb|EFH45513.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 2147
Score = 94.4 bits (233), Expect = 1e-17
Identities = 42/48 (87%), Positives = 46/48 (95%)
Frame = +1
Query: 109 PSEICSIYMKRGISKLYPWQVNCLRVDGVLQKRNLVYCASTSAGKSFV 252
PSE+CS+Y K+GISKLYPWQV CL+VDGVLQKRNLVYCASTSAGKSFV
Sbjct: 499 PSEVCSVYNKKGISKLYPWQVECLQVDGVLQKRNLVYCASTSAGKSFV 546
>ref|NP_001078482.1| MUS308 and mammalian DNA polymerase-like protein [Arabidopsis
thaliana] gi|62241195|dbj|BAD93700.1| helicase and
polymerase containing protein TEBICHI [Arabidopsis
thaliana] gi|332660705|gb|AEE86105.1| MUS308 and
mammalian DNA polymerase-like protein [Arabidopsis
thaliana]
Length = 2154
Score = 94.4 bits (233), Expect = 1e-17
Identities = 42/48 (87%), Positives = 46/48 (95%)
Frame = +1
Query: 109 PSEICSIYMKRGISKLYPWQVNCLRVDGVLQKRNLVYCASTSAGKSFV 252
PSE+CS+Y K+GISKLYPWQV CL+VDGVLQKRNLVYCASTSAGKSFV
Sbjct: 500 PSEVCSVYNKKGISKLYPWQVECLQVDGVLQKRNLVYCASTSAGKSFV 547
>ref|XP_007226676.1| hypothetical protein PRUPE_ppa020963mg [Prunus persica]
gi|462423612|gb|EMJ27875.1| hypothetical protein
PRUPE_ppa020963mg [Prunus persica]
Length = 2169
Score = 93.6 bits (231), Expect = 3e-17
Identities = 45/77 (58%), Positives = 52/77 (67%)
Frame = +1
Query: 22 LVTDHTYDGVGTPXXXXXXXXXXXXXXXXPSEICSIYMKRGISKLYPWQVNCLRVDGVLQ 201
L +H D TP P EICS+Y K+GISKLYPWQV+CL+V+GVLQ
Sbjct: 463 LTGNHESDEASTPSSFVPLKDHLDLNSWLPPEICSLYRKKGISKLYPWQVDCLQVEGVLQ 522
Query: 202 KRNLVYCASTSAGKSFV 252
+RNLVYCASTSAGKSFV
Sbjct: 523 RRNLVYCASTSAGKSFV 539
>ref|XP_006282845.1| hypothetical protein CARUB_v10006788mg [Capsella rubella]
gi|482551550|gb|EOA15743.1| hypothetical protein
CARUB_v10006788mg [Capsella rubella]
Length = 2162
Score = 92.0 bits (227), Expect = 7e-17
Identities = 41/48 (85%), Positives = 45/48 (93%)
Frame = +1
Query: 109 PSEICSIYMKRGISKLYPWQVNCLRVDGVLQKRNLVYCASTSAGKSFV 252
PSE+CS+Y K+GI KLYPWQV CL+VDGVLQKRNLVYCASTSAGKSFV
Sbjct: 504 PSEVCSVYNKKGIFKLYPWQVECLQVDGVLQKRNLVYCASTSAGKSFV 551
>ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Vitis
vinifera]
Length = 2181
Score = 92.0 bits (227), Expect = 7e-17
Identities = 42/48 (87%), Positives = 46/48 (95%)
Frame = +1
Query: 109 PSEICSIYMKRGISKLYPWQVNCLRVDGVLQKRNLVYCASTSAGKSFV 252
PSEIC+IY K+GISKLY WQV+CL+VDGVLQKRNLVYCASTSAGKSFV
Sbjct: 509 PSEICNIYRKKGISKLYSWQVDCLKVDGVLQKRNLVYCASTSAGKSFV 556
>emb|CBI20904.3| unnamed protein product [Vitis vinifera]
Length = 2091
Score = 92.0 bits (227), Expect = 7e-17
Identities = 42/48 (87%), Positives = 46/48 (95%)
Frame = +1
Query: 109 PSEICSIYMKRGISKLYPWQVNCLRVDGVLQKRNLVYCASTSAGKSFV 252
PSEIC+IY K+GISKLY WQV+CL+VDGVLQKRNLVYCASTSAGKSFV
Sbjct: 491 PSEICNIYRKKGISKLYSWQVDCLKVDGVLQKRNLVYCASTSAGKSFV 538
>ref|XP_002324822.2| hypothetical protein POPTR_0018s00860g [Populus trichocarpa]
gi|550317750|gb|EEF03387.2| hypothetical protein
POPTR_0018s00860g [Populus trichocarpa]
Length = 2173
Score = 91.7 bits (226), Expect = 1e-16
Identities = 43/67 (64%), Positives = 49/67 (73%)
Frame = +1
Query: 52 GTPXXXXXXXXXXXXXXXXPSEICSIYMKRGISKLYPWQVNCLRVDGVLQKRNLVYCAST 231
GTP P E+CSIY ++GISKLYPWQV+CL+VDGVLQ+RNLVYCAST
Sbjct: 467 GTPSSFGPLKDRLDLSNWLPLEVCSIYKRKGISKLYPWQVDCLQVDGVLQRRNLVYCAST 526
Query: 232 SAGKSFV 252
SAGKSFV
Sbjct: 527 SAGKSFV 533
>ref|XP_006837921.1| hypothetical protein AMTR_s00218p00019950 [Amborella trichopoda]
gi|548840332|gb|ERN00490.1| hypothetical protein
AMTR_s00218p00019950 [Amborella trichopoda]
Length = 1171
Score = 90.5 bits (223), Expect = 2e-16
Identities = 44/76 (57%), Positives = 51/76 (67%)
Frame = +1
Query: 25 VTDHTYDGVGTPXXXXXXXXXXXXXXXXPSEICSIYMKRGISKLYPWQVNCLRVDGVLQK 204
V D T + GTP PS+IC +Y+K+GIS+LYPWQV CL+VDGV QK
Sbjct: 529 VCDTTLNVNGTPSSSTSLNGHLQLRTWLPSKICEVYLKKGISRLYPWQVECLQVDGVQQK 588
Query: 205 RNLVYCASTSAGKSFV 252
RNLVYCASTSAGKS V
Sbjct: 589 RNLVYCASTSAGKSIV 604
>ref|XP_004962606.1| PREDICTED: DNA polymerase theta-like isoform X1 [Setaria italica]
gi|514752594|ref|XP_004962607.1| PREDICTED: DNA
polymerase theta-like isoform X2 [Setaria italica]
gi|514752598|ref|XP_004962608.1| PREDICTED: DNA
polymerase theta-like isoform X3 [Setaria italica]
gi|514752600|ref|XP_004962609.1| PREDICTED: DNA
polymerase theta-like isoform X4 [Setaria italica]
Length = 2082
Score = 90.1 bits (222), Expect = 3e-16
Identities = 45/84 (53%), Positives = 54/84 (64%)
Frame = +1
Query: 1 EKDIRSPLVTDHTYDGVGTPXXXXXXXXXXXXXXXXPSEICSIYMKRGISKLYPWQVNCL 180
+KD +S V+ TP P E+C++YMK+GIS+LYPWQV CL
Sbjct: 445 KKDSKSKFVSQEVE--ASTPTSSVPLKDHSKLSSWLPPELCAVYMKKGISELYPWQVECL 502
Query: 181 RVDGVLQKRNLVYCASTSAGKSFV 252
VDGVL+KRNLVYCASTSAGKSFV
Sbjct: 503 LVDGVLEKRNLVYCASTSAGKSFV 526
>ref|XP_004292864.1| PREDICTED: DNA polymerase theta-like [Fragaria vesca subsp. vesca]
Length = 2164
Score = 90.1 bits (222), Expect = 3e-16
Identities = 41/46 (89%), Positives = 44/46 (95%)
Frame = +1
Query: 115 EICSIYMKRGISKLYPWQVNCLRVDGVLQKRNLVYCASTSAGKSFV 252
EICSIY K+GISKLYPWQV CL+VDGVLQ+RNLVYCASTSAGKSFV
Sbjct: 499 EICSIYRKKGISKLYPWQVECLQVDGVLQRRNLVYCASTSAGKSFV 544
>ref|XP_004498542.1| PREDICTED: DNA polymerase theta-like [Cicer arietinum]
Length = 2141
Score = 89.0 bits (219), Expect = 6e-16
Identities = 41/48 (85%), Positives = 45/48 (93%)
Frame = +1
Query: 109 PSEICSIYMKRGISKLYPWQVNCLRVDGVLQKRNLVYCASTSAGKSFV 252
P EICSIY K+GISKLY WQV+CLRV+GVLQ+RNLVYCASTSAGKSFV
Sbjct: 468 PPEICSIYRKKGISKLYNWQVDCLRVNGVLQRRNLVYCASTSAGKSFV 515
>ref|XP_003588560.1| DNA polymerase I family protein expressed [Medicago truncatula]
gi|355477608|gb|AES58811.1| DNA polymerase I family
protein expressed [Medicago truncatula]
Length = 2269
Score = 88.6 bits (218), Expect = 8e-16
Identities = 41/46 (89%), Positives = 44/46 (95%)
Frame = +1
Query: 115 EICSIYMKRGISKLYPWQVNCLRVDGVLQKRNLVYCASTSAGKSFV 252
EICSIY K+GISKLY WQV+CLRVDGVLQ+RNLVYCASTSAGKSFV
Sbjct: 521 EICSIYRKKGISKLYNWQVDCLRVDGVLQRRNLVYCASTSAGKSFV 566
>ref|XP_006356662.1| PREDICTED: DNA polymerase theta-like [Solanum tuberosum]
Length = 2144
Score = 87.4 bits (215), Expect = 2e-15
Identities = 39/48 (81%), Positives = 44/48 (91%)
Frame = +1
Query: 109 PSEICSIYMKRGISKLYPWQVNCLRVDGVLQKRNLVYCASTSAGKSFV 252
PSE+C+IY K+GISKLY WQV+CL+VDGVL RNLVYCASTSAGKSFV
Sbjct: 489 PSEVCNIYRKKGISKLYSWQVDCLQVDGVLHNRNLVYCASTSAGKSFV 536
>ref|XP_004245418.1| PREDICTED: DNA polymerase theta-like [Solanum lycopersicum]
Length = 2168
Score = 87.4 bits (215), Expect = 2e-15
Identities = 39/48 (81%), Positives = 44/48 (91%)
Frame = +1
Query: 109 PSEICSIYMKRGISKLYPWQVNCLRVDGVLQKRNLVYCASTSAGKSFV 252
PSE+C+IY K+GISKLY WQV+CL+VDGVL RNLVYCASTSAGKSFV
Sbjct: 513 PSEVCNIYRKKGISKLYSWQVDCLQVDGVLHNRNLVYCASTSAGKSFV 560
>gb|EEE53068.1| hypothetical protein OsJ_35810 [Oryza sativa Japonica Group]
Length = 2044
Score = 86.7 bits (213), Expect = 3e-15
Identities = 38/48 (79%), Positives = 44/48 (91%)
Frame = +1
Query: 109 PSEICSIYMKRGISKLYPWQVNCLRVDGVLQKRNLVYCASTSAGKSFV 252
P E+C+IYMK+GI +LYPWQV CL V+GVL+KRNLVYCASTSAGKSFV
Sbjct: 477 PPELCAIYMKKGIPELYPWQVECLLVEGVLEKRNLVYCASTSAGKSFV 524