BLASTX nr result

ID: Cocculus23_contig00055718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00055718
         (262 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300438.2| hypothetical protein POPTR_0001s38890g [Popu...    60   2e-07
ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer ar...    60   4e-07
ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer ar...    60   4e-07

>ref|XP_002300438.2| hypothetical protein POPTR_0001s38890g [Populus trichocarpa]
           gi|550349213|gb|EEE85243.2| hypothetical protein
           POPTR_0001s38890g [Populus trichocarpa]
          Length = 309

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 26/42 (61%), Positives = 34/42 (80%)
 Frame = +2

Query: 2   SFPKMLEYKNKLIPHPQLLSLKDWFSQYQLTVKHIPGSTKNI 127
           SFPKML++K K++PHPQLL L +WF +Y  TV+HI G TKN+
Sbjct: 98  SFPKMLQFKRKMLPHPQLLRLAEWFPKYTFTVEHIKG-TKNL 138


>ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1170

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 25/38 (65%), Positives = 31/38 (81%)
 Frame = +2

Query: 2    SFPKMLEYKNKLIPHPQLLSLKDWFSQYQLTVKHIPGS 115
            SFP++LE+KNK+ P PQ L LKDWFS+Y  TVKHI G+
Sbjct: 1045 SFPRILEFKNKMPPDPQTLRLKDWFSRYDFTVKHIKGN 1082


>ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1951

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 25/38 (65%), Positives = 31/38 (81%)
 Frame = +2

Query: 2    SFPKMLEYKNKLIPHPQLLSLKDWFSQYQLTVKHIPGS 115
            SFP++LE+KNK+ P PQ L LKDWFS+Y  TVKHI G+
Sbjct: 1712 SFPRILEFKNKMPPDPQTLRLKDWFSRYDFTVKHIKGN 1749


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