BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00055621
         (302 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA84681.1| unknown protein (chloroplast) [Nicotiana tabacum]...    60   2e-07
gb|AAA84682.1| unknown protein (chloroplast) [Nicotiana tabacum]...    43   5e-07

>gb|AAA84681.1| unknown protein (chloroplast) [Nicotiana tabacum]
           gi|224350|prf||1102209D ORF 4
          Length = 64

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 35/59 (59%), Positives = 42/59 (71%), Gaps = 7/59 (11%)
 Frame = +3

Query: 3   KSFLDLKKRKIEKKRNNFADNYRFFVWSEESSKYSGFGLTI-------RNRKERISSLH 158
           KSFLDLKK    KKRNNFADNY FF+ SEESS+Y  FG+T+        N++E+I SLH
Sbjct: 11  KSFLDLKK----KKRNNFADNYIFFILSEESSEY--FGITLVSISFWNMNKEEKIGSLH 63


>gb|AAA84682.1| unknown protein (chloroplast) [Nicotiana tabacum]
           gi|224352|prf||1102209F ORF 6
          Length = 79

 Score = 43.1 bits (100), Expect(2) = 5e-07
 Identities = 21/29 (72%), Positives = 22/29 (75%)
 Frame = -3

Query: 246 ISSRTKHESFDSFGSHAQLLNGGIPISFF 160
           I SRTKHESFDSFGSHAQLL     I F+
Sbjct: 15  IPSRTKHESFDSFGSHAQLLKVNSHIFFY 43



 Score = 36.2 bits (82), Expect(2) = 5e-07
 Identities = 22/42 (52%), Positives = 26/42 (61%), Gaps = 6/42 (14%)
 Frame = -2

Query: 178 HSHIFF*-CNELILSFLFLI-----VNPKPEYLEDSSDQTKN 71
           +SHIFF  CNE I S LF+       N  P+Y EDSSD+ KN
Sbjct: 37  NSHIFFYECNEPIFSSLFIFQKDIETNVIPKYSEDSSDKIKN 78