BLASTX nr result
ID: Cocculus23_contig00055589
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00055589
(375 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007010915.1| U5 small nuclear ribonucleoprotein helicase,... 136 3e-30
ref|XP_007010914.1| U5 small nuclear ribonucleoprotein helicase,... 136 3e-30
gb|EXB36921.1| U5 small nuclear ribonucleoprotein 200 kDa helica... 134 1e-29
ref|XP_007149260.1| hypothetical protein PHAVU_005G055300g [Phas... 134 1e-29
ref|XP_006598183.1| PREDICTED: U5 small nuclear ribonucleoprotei... 134 1e-29
ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotei... 134 1e-29
ref|XP_007208410.1| hypothetical protein PRUPE_ppa000042mg [Prun... 131 1e-28
ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc... 131 1e-28
ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotei... 131 1e-28
ref|XP_002322252.1| U5 small nuclear ribonucleoprotein helicase ... 131 1e-28
emb|CBI36671.3| unnamed protein product [Vitis vinifera] 130 1e-28
ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei... 130 1e-28
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera] 130 1e-28
ref|XP_004488845.1| PREDICTED: U5 small nuclear ribonucleoprotei... 129 5e-28
ref|XP_006306573.1| hypothetical protein CARUB_v10008066mg [Caps... 127 1e-27
ref|NP_173520.1| putative U5 small nuclear ribonucleoprotein hel... 127 1e-27
ref|XP_002893142.1| EMB1507 [Arabidopsis lyrata subsp. lyrata] g... 127 1e-27
gb|EPS64394.1| hypothetical protein M569_10384, partial [Genlise... 127 2e-27
ref|XP_006350847.1| PREDICTED: U5 small nuclear ribonucleoprotei... 127 2e-27
ref|XP_006416344.1| hypothetical protein EUTSA_v10006525mg [Eutr... 127 2e-27
>ref|XP_007010915.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 2
[Theobroma cacao] gi|508727828|gb|EOY19725.1| U5 small
nuclear ribonucleoprotein helicase, putative isoform 2
[Theobroma cacao]
Length = 2062
Score = 136 bits (342), Expect = 3e-30
Identities = 62/64 (96%), Positives = 64/64 (100%)
Frame = -3
Query: 193 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKNFGDRVY 14
MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDP++FGDRVY
Sbjct: 1 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPRSFGDRVY 60
Query: 13 KGRP 2
KGRP
Sbjct: 61 KGRP 64
>ref|XP_007010914.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 1
[Theobroma cacao] gi|508727827|gb|EOY19724.1| U5 small
nuclear ribonucleoprotein helicase, putative isoform 1
[Theobroma cacao]
Length = 2176
Score = 136 bits (342), Expect = 3e-30
Identities = 62/64 (96%), Positives = 64/64 (100%)
Frame = -3
Query: 193 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKNFGDRVY 14
MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDP++FGDRVY
Sbjct: 1 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPRSFGDRVY 60
Query: 13 KGRP 2
KGRP
Sbjct: 61 KGRP 64
>gb|EXB36921.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Morus
notabilis]
Length = 2183
Score = 134 bits (338), Expect = 1e-29
Identities = 61/64 (95%), Positives = 63/64 (98%)
Frame = -3
Query: 193 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKNFGDRVY 14
MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPK+FGDR Y
Sbjct: 1 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKHFGDRAY 60
Query: 13 KGRP 2
+GRP
Sbjct: 61 RGRP 64
>ref|XP_007149260.1| hypothetical protein PHAVU_005G055300g [Phaseolus vulgaris]
gi|593697576|ref|XP_007149261.1| hypothetical protein
PHAVU_005G055300g [Phaseolus vulgaris]
gi|561022524|gb|ESW21254.1| hypothetical protein
PHAVU_005G055300g [Phaseolus vulgaris]
gi|561022525|gb|ESW21255.1| hypothetical protein
PHAVU_005G055300g [Phaseolus vulgaris]
Length = 2184
Score = 134 bits (338), Expect = 1e-29
Identities = 61/64 (95%), Positives = 63/64 (98%)
Frame = -3
Query: 193 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKNFGDRVY 14
MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPK+FGDR Y
Sbjct: 1 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKSFGDRAY 60
Query: 13 KGRP 2
+GRP
Sbjct: 61 RGRP 64
>ref|XP_006598183.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
isoform X1 [Glycine max]
Length = 2183
Score = 134 bits (338), Expect = 1e-29
Identities = 61/64 (95%), Positives = 63/64 (98%)
Frame = -3
Query: 193 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKNFGDRVY 14
MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPK+FGDR Y
Sbjct: 1 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKSFGDRAY 60
Query: 13 KGRP 2
+GRP
Sbjct: 61 RGRP 64
>ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Glycine max]
Length = 2183
Score = 134 bits (338), Expect = 1e-29
Identities = 61/64 (95%), Positives = 63/64 (98%)
Frame = -3
Query: 193 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKNFGDRVY 14
MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPK+FGDR Y
Sbjct: 1 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKSFGDRAY 60
Query: 13 KGRP 2
+GRP
Sbjct: 61 RGRP 64
>ref|XP_007208410.1| hypothetical protein PRUPE_ppa000042mg [Prunus persica]
gi|462404052|gb|EMJ09609.1| hypothetical protein
PRUPE_ppa000042mg [Prunus persica]
Length = 2180
Score = 131 bits (329), Expect = 1e-28
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = -3
Query: 187 HLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKNFGDRVYKG 8
HLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPK+FGDR Y+G
Sbjct: 4 HLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKHFGDRAYRG 63
Query: 7 RP 2
RP
Sbjct: 64 RP 65
>ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
200 kDa helicase-like [Cucumis sativus]
Length = 2175
Score = 131 bits (329), Expect = 1e-28
Identities = 60/64 (93%), Positives = 63/64 (98%)
Frame = -3
Query: 193 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKNFGDRVY 14
MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESL+GKIDPK+FGDR Y
Sbjct: 1 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLYGKIDPKSFGDRAY 60
Query: 13 KGRP 2
+GRP
Sbjct: 61 RGRP 64
>ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Cucumis sativus]
Length = 2175
Score = 131 bits (329), Expect = 1e-28
Identities = 60/64 (93%), Positives = 63/64 (98%)
Frame = -3
Query: 193 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKNFGDRVY 14
MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESL+GKIDPK+FGDR Y
Sbjct: 1 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLYGKIDPKSFGDRAY 60
Query: 13 KGRP 2
+GRP
Sbjct: 61 RGRP 64
>ref|XP_002322252.1| U5 small nuclear ribonucleoprotein helicase [Populus trichocarpa]
gi|222869248|gb|EEF06379.1| U5 small nuclear
ribonucleoprotein helicase [Populus trichocarpa]
Length = 2157
Score = 131 bits (329), Expect = 1e-28
Identities = 58/64 (90%), Positives = 63/64 (98%)
Frame = -3
Query: 193 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKNFGDRVY 14
MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPE+LWG+IDP++FGDR Y
Sbjct: 1 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPETLWGRIDPRSFGDRAY 60
Query: 13 KGRP 2
+GRP
Sbjct: 61 RGRP 64
>emb|CBI36671.3| unnamed protein product [Vitis vinifera]
Length = 1405
Score = 130 bits (328), Expect = 1e-28
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = -3
Query: 193 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKNFGDRVY 14
MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESL+GKIDPK FGDR Y
Sbjct: 1 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLYGKIDPKTFGDRAY 60
Query: 13 KGRP 2
+GRP
Sbjct: 61 RGRP 64
>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase
[Vitis vinifera]
Length = 2177
Score = 130 bits (328), Expect = 1e-28
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = -3
Query: 193 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKNFGDRVY 14
MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESL+GKIDPK FGDR Y
Sbjct: 1 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLYGKIDPKTFGDRAY 60
Query: 13 KGRP 2
+GRP
Sbjct: 61 RGRP 64
>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
Length = 2144
Score = 130 bits (328), Expect = 1e-28
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = -3
Query: 193 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKNFGDRVY 14
MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESL+GKIDPK FGDR Y
Sbjct: 1 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLYGKIDPKTFGDRAY 60
Query: 13 KGRP 2
+GRP
Sbjct: 61 RGRP 64
>ref|XP_004488845.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
isoform X1 [Cicer arietinum]
gi|502089221|ref|XP_004488846.1| PREDICTED: U5 small
nuclear ribonucleoprotein 200 kDa helicase-like isoform
X2 [Cicer arietinum]
Length = 2187
Score = 129 bits (323), Expect = 5e-28
Identities = 60/64 (93%), Positives = 61/64 (95%)
Frame = -3
Query: 193 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKNFGDRVY 14
MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPK+FGDRV
Sbjct: 1 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKSFGDRVS 60
Query: 13 KGRP 2
RP
Sbjct: 61 HDRP 64
>ref|XP_006306573.1| hypothetical protein CARUB_v10008066mg [Capsella rubella]
gi|482575284|gb|EOA39471.1| hypothetical protein
CARUB_v10008066mg [Capsella rubella]
Length = 2170
Score = 127 bits (320), Expect = 1e-27
Identities = 58/64 (90%), Positives = 63/64 (98%)
Frame = -3
Query: 193 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKNFGDRVY 14
MA+LGGGAEAHARFKQYEYRANSSLVLTTD+RPRDTHEPTGEPE+LWGKIDP++FGDRV
Sbjct: 1 MANLGGGAEAHARFKQYEYRANSSLVLTTDNRPRDTHEPTGEPETLWGKIDPRSFGDRVA 60
Query: 13 KGRP 2
KGRP
Sbjct: 61 KGRP 64
>ref|NP_173520.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis
thaliana] gi|334182730|ref|NP_001185050.1| putative U5
small nuclear ribonucleoprotein helicase [Arabidopsis
thaliana] gi|4836892|gb|AAD30595.1|AC007369_5 Putative
RNA helicase [Arabidopsis thaliana]
gi|332191925|gb|AEE30046.1| putative U5 small nuclear
ribonucleoprotein helicase [Arabidopsis thaliana]
gi|332191926|gb|AEE30047.1| putative U5 small nuclear
ribonucleoprotein helicase [Arabidopsis thaliana]
Length = 2171
Score = 127 bits (320), Expect = 1e-27
Identities = 58/64 (90%), Positives = 63/64 (98%)
Frame = -3
Query: 193 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKNFGDRVY 14
MA+LGGGAEAHARFKQYEYRANSSLVLTTD+RPRDTHEPTGEPE+LWGKIDP++FGDRV
Sbjct: 1 MANLGGGAEAHARFKQYEYRANSSLVLTTDNRPRDTHEPTGEPETLWGKIDPRSFGDRVA 60
Query: 13 KGRP 2
KGRP
Sbjct: 61 KGRP 64
>ref|XP_002893142.1| EMB1507 [Arabidopsis lyrata subsp. lyrata]
gi|297338984|gb|EFH69401.1| EMB1507 [Arabidopsis lyrata
subsp. lyrata]
Length = 2171
Score = 127 bits (320), Expect = 1e-27
Identities = 58/64 (90%), Positives = 63/64 (98%)
Frame = -3
Query: 193 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKNFGDRVY 14
MA+LGGGAEAHARFKQYEYRANSSLVLTTD+RPRDTHEPTGEPE+LWGKIDP++FGDRV
Sbjct: 1 MANLGGGAEAHARFKQYEYRANSSLVLTTDNRPRDTHEPTGEPETLWGKIDPRSFGDRVA 60
Query: 13 KGRP 2
KGRP
Sbjct: 61 KGRP 64
>gb|EPS64394.1| hypothetical protein M569_10384, partial [Genlisea aurea]
Length = 977
Score = 127 bits (319), Expect = 2e-27
Identities = 57/64 (89%), Positives = 61/64 (95%)
Frame = -3
Query: 193 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKNFGDRVY 14
MAH GGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPE+LWGKIDPK+FGDR Y
Sbjct: 18 MAHQGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPETLWGKIDPKSFGDRAY 77
Query: 13 KGRP 2
+ +P
Sbjct: 78 RDKP 81
>ref|XP_006350847.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Solanum tuberosum]
Length = 2174
Score = 127 bits (318), Expect = 2e-27
Identities = 58/64 (90%), Positives = 63/64 (98%)
Frame = -3
Query: 193 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKNFGDRVY 14
M++LGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEP+GEPESL+GKIDPK+FGDR Y
Sbjct: 1 MSNLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPSGEPESLYGKIDPKSFGDRAY 60
Query: 13 KGRP 2
KGRP
Sbjct: 61 KGRP 64
>ref|XP_006416344.1| hypothetical protein EUTSA_v10006525mg [Eutrema salsugineum]
gi|557094115|gb|ESQ34697.1| hypothetical protein
EUTSA_v10006525mg [Eutrema salsugineum]
Length = 2160
Score = 127 bits (318), Expect = 2e-27
Identities = 58/64 (90%), Positives = 62/64 (96%)
Frame = -3
Query: 193 MAHLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPESLWGKIDPKNFGDRVY 14
MA+LGGGAEAHARFKQYEYRANSSLVLTTD+RPRDTHEPTGEPE+LWGKIDP +FGDRV
Sbjct: 1 MANLGGGAEAHARFKQYEYRANSSLVLTTDNRPRDTHEPTGEPETLWGKIDPNSFGDRVA 60
Query: 13 KGRP 2
KGRP
Sbjct: 61 KGRP 64