BLASTX nr result
ID: Cocculus23_contig00055573
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00055573
(261 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN78360.1| hypothetical protein VITISV_023416 [Vitis vinifera] 53 5e-13
ref|XP_006603341.1| PREDICTED: uncharacterized protein LOC102663... 50 2e-12
emb|CAN74690.1| hypothetical protein VITISV_001350 [Vitis vinifera] 56 6e-12
emb|CAN67224.1| hypothetical protein VITISV_029053 [Vitis vinifera] 49 2e-11
emb|CAN65523.1| hypothetical protein VITISV_031372 [Vitis vinifera] 56 2e-11
ref|XP_004150429.1| PREDICTED: uncharacterized protein LOC101203... 55 9e-11
emb|CAN68382.1| hypothetical protein VITISV_041532 [Vitis vinifera] 52 2e-10
ref|XP_006590126.1| PREDICTED: uncharacterized protein LOC100783... 49 3e-10
ref|XP_006593203.1| PREDICTED: uncharacterized protein LOC102666... 45 5e-10
ref|XP_006598390.1| PREDICTED: putative ribonuclease H protein A... 50 7e-10
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid... 46 1e-09
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 50 3e-09
emb|CAN62630.1| hypothetical protein VITISV_031438 [Vitis vinifera] 46 3e-09
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 45 4e-09
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 44 6e-09
emb|CAN70443.1| hypothetical protein VITISV_015572 [Vitis vinifera] 50 7e-09
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana] 48 1e-08
emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulga... 45 2e-08
ref|XP_006582707.1| PREDICTED: putative ribonuclease H protein A... 43 2e-08
ref|XP_007214027.1| hypothetical protein PRUPE_ppa016677mg [Prun... 56 3e-08
>emb|CAN78360.1| hypothetical protein VITISV_023416 [Vitis vinifera]
Length = 520
Score = 52.8 bits (125), Expect(2) = 5e-13
Identities = 22/51 (43%), Positives = 36/51 (70%)
Frame = +2
Query: 104 PIIPFPFHYFVDILCRLMGKAKEKHVVEGFVIGKEKANLSHLQYADDTLFF 256
P+ PF F DIL ++ +AKE++ +EGF +G+ + +SH Q+AD+T+FF
Sbjct: 242 PLSPFLFTSVXDILSXMLLRAKERNSLEGFRVGRNRTRVSHFQFADNTIFF 292
Score = 47.0 bits (110), Expect(2) = 5e-13
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = +3
Query: 6 WITGCRGCTFLSIIVNGRPRDKILADRGLRQGDLLSPFLF 125
W+ GC ++VNG ++ + A RGLRQGD LSPFLF
Sbjct: 209 WVRGCLSTVSFVVLVNGNTKEWVKAARGLRQGDPLSPFLF 248
>ref|XP_006603341.1| PREDICTED: uncharacterized protein LOC102663923 [Glycine max]
Length = 683
Score = 50.4 bits (119), Expect(2) = 2e-12
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +3
Query: 3 SWITGCRGCTFLSIIVNGRPRDKILADRGLRQGDLLSPFLF 125
SWI C +SI+VNG P D+ RGLRQGD L+PFLF
Sbjct: 162 SWIKECLSSASISILVNGSPTDEFKPQRGLRQGDPLAPFLF 202
Score = 47.0 bits (110), Expect(2) = 2e-12
Identities = 21/51 (41%), Positives = 34/51 (66%)
Frame = +2
Query: 104 PIIPFPFHYFVDILCRLMGKAKEKHVVEGFVIGKEKANLSHLQYADDTLFF 256
P+ PF F+ + L +M +A K++ F++GKEK ++ LQ+ADDT+FF
Sbjct: 196 PLAPFLFNLVAEGLSGMMREAVAKNLYHSFLVGKEKIPVNMLQFADDTIFF 246
>emb|CAN74690.1| hypothetical protein VITISV_001350 [Vitis vinifera]
Length = 748
Score = 55.8 bits (133), Expect(2) = 6e-12
Identities = 22/48 (45%), Positives = 37/48 (77%)
Frame = +2
Query: 113 PFPFHYFVDILCRLMGKAKEKHVVEGFVIGKEKANLSHLQYADDTLFF 256
PF F D+L R++ +A+E++++EGF +G+ + +SHLQ+ADDT+FF
Sbjct: 621 PFLFTLVADVLSRMLLRAEERNLLEGFRVGRNRTRVSHLQFADDTIFF 668
Score = 40.0 bits (92), Expect(2) = 6e-12
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +3
Query: 39 SIIVNGRPRDKILADRGLRQGDLLSPFLFIIL 134
+++VNG + + A RGLRQGD LSPFLF ++
Sbjct: 596 AVLVNGNTKGWVKASRGLRQGDSLSPFLFTLV 627
>emb|CAN67224.1| hypothetical protein VITISV_029053 [Vitis vinifera]
Length = 1120
Score = 49.3 bits (116), Expect(2) = 2e-11
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +3
Query: 6 WITGCRGCTFLSIIVNGRPRDKILADRGLRQGDLLSPFLFIIL 134
W+ GC +++VNG ++ + A RGLRQ DLLSPFLF I+
Sbjct: 649 WMRGCLSSVSFAVLVNGNAKEWVKASRGLRQRDLLSPFLFTIV 691
Score = 44.7 bits (104), Expect(2) = 2e-11
Identities = 18/48 (37%), Positives = 33/48 (68%)
Frame = +2
Query: 113 PFPFHYFVDILCRLMGKAKEKHVVEGFVIGKEKANLSHLQYADDTLFF 256
PF F ++L ++ +A+E++V+ GF +G+ + +S LQ+ DDT+FF
Sbjct: 685 PFLFTIVANVLSMMLLRAEERNVLXGFRVGRNRIRVSXLQFXDDTIFF 732
>emb|CAN65523.1| hypothetical protein VITISV_031372 [Vitis vinifera]
Length = 542
Score = 56.2 bits (134), Expect(2) = 2e-11
Identities = 21/51 (41%), Positives = 38/51 (74%)
Frame = +2
Query: 104 PIIPFPFHYFVDILCRLMGKAKEKHVVEGFVIGKEKANLSHLQYADDTLFF 256
P+ PF F F D+L R+M +A+E++ ++GF +G+ + ++H+Q+ DDT+FF
Sbjct: 413 PLSPFLFTLFTDVLSRMMLRAEERNSLKGFRVGRNRTGVTHMQFTDDTIFF 463
Score = 37.7 bits (86), Expect(2) = 2e-11
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +3
Query: 15 GCRGCTFLSIIVNGRPRDKILADRGLRQGDLLSPFLFII 131
GC ++VNG + A RGLRQ D LSPFLF +
Sbjct: 383 GCLSTVSFVVLVNGNAKRWFKASRGLRQDDPLSPFLFTL 421
>ref|XP_004150429.1| PREDICTED: uncharacterized protein LOC101203110 [Cucumis sativus]
Length = 309
Score = 55.1 bits (131), Expect(2) = 9e-11
Identities = 28/43 (65%), Positives = 31/43 (72%)
Frame = +3
Query: 6 WITGCRGCTFLSIIVNGRPRDKILADRGLRQGDLLSPFLFIIL 134
WI GC SI VNGRPR KILA RG+RQGDLL+P LF I+
Sbjct: 65 WIWGCLSTKNFSI-VNGRPRGKILAKRGIRQGDLLTPLLFTIM 106
Score = 37.0 bits (84), Expect(2) = 9e-11
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +2
Query: 107 IIPFPFHYFVDILCRLMGKAKEKHVVEGFVIGKEKANLSHLQYADDTLFF 256
+ P F D L L+ EK ++GF +L+HLQYADDTL F
Sbjct: 98 LTPLLFTIMGDALSCLIHYCNEKRSLKGFHFENLSDDLTHLQYADDTLLF 147
>emb|CAN68382.1| hypothetical protein VITISV_041532 [Vitis vinifera]
Length = 964
Score = 52.0 bits (123), Expect(2) = 2e-10
Identities = 21/48 (43%), Positives = 35/48 (72%)
Frame = +2
Query: 113 PFPFHYFVDILCRLMGKAKEKHVVEGFVIGKEKANLSHLQYADDTLFF 256
PF F ++L R++ +A+EK++ EGF +G+ + +SHLQ+A DT+FF
Sbjct: 611 PFLFTLVTNVLSRMLMRAEEKNMFEGFRVGRNRTRVSHLQFAGDTIFF 658
Score = 38.9 bits (89), Expect(2) = 2e-10
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 6 WITGCRGCTFLSIIVNGRPRDKILADRGLRQGDLLSPFLFIIL 134
W++G +I+V G + + A RGLRQG LSPFLF ++
Sbjct: 575 WMSGYLSLVSYAILVRGSAKGWVKASRGLRQGYTLSPFLFTLV 617
>ref|XP_006590126.1| PREDICTED: uncharacterized protein LOC100783452 [Glycine max]
Length = 653
Score = 49.3 bits (116), Expect(2) = 3e-10
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +3
Query: 6 WITGCRGCTFLSIIVNGRPRDKILADRGLRQGDLLSPFLFII 131
WI GC +S++VNG P ++ + RGLRQGD L+P LF I
Sbjct: 461 WIEGCLTSAMISVLVNGSPTNEFIPHRGLRQGDSLAPLLFNI 502
Score = 40.8 bits (94), Expect(2) = 3e-10
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +2
Query: 107 IIPFPFHYFVDILCRLMGKAKEKHVVEGFVIGKEKANLSHLQYADDTLFF 256
+ P F+ + L LM +A +K++ F++GK ++ LQYADDT+FF
Sbjct: 495 LAPLLFNIAAEGLTGLMREALDKNLFSSFLVGKNNIPVNILQYADDTIFF 544
>ref|XP_006593203.1| PREDICTED: uncharacterized protein LOC102666228 [Glycine max]
Length = 599
Score = 45.4 bits (106), Expect(2) = 5e-10
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +3
Query: 6 WITGCRGCTFLSIIVNGRPRDKILADRGLRQGDLLSPFLFII 131
WI GC +SI++NG + L +R LRQGD L+PFLF I
Sbjct: 153 WIHGCLSSATISILINGSTTREFLPERRLRQGDPLAPFLFNI 194
Score = 43.9 bits (102), Expect(2) = 5e-10
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +2
Query: 104 PIIPFPFHYFVDILCRLMGKAKEKHVVEGFVIGKEKANLSHLQYADDTLFF 256
P+ PF F+ + L LM K++ + +G++K ++ LQYADDTLFF
Sbjct: 186 PLAPFLFNIAAEGLTGLMRTTVSKNLFSSYKVGRQKEEINILQYADDTLFF 236
>ref|XP_006598390.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 413
Score = 49.7 bits (117), Expect(2) = 7e-10
Identities = 22/43 (51%), Positives = 28/43 (65%)
Frame = +3
Query: 6 WITGCRGCTFLSIIVNGRPRDKILADRGLRQGDLLSPFLFIIL 134
W+ GC +S++VNG P + RGLRQGDLLSP LF I+
Sbjct: 35 WMLGCLKSASISVLVNGSPTKEFYPQRGLRQGDLLSPLLFNIV 77
Score = 39.3 bits (90), Expect(2) = 7e-10
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2
Query: 113 PFPFHYFVDILCRLMGKAKEKHVVEGFVIGKEKANLSHLQYADDTLF 253
P F+ + L LM KA + + GF++G K +S LQY DDT+F
Sbjct: 71 PLLFNIVAEGLSGLMSKAINRGLYRGFLVGINKVEVSLLQYVDDTIF 117
>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
gi|7267666|emb|CAB78094.1| RNA-directed DNA
polymerase-like protein [Arabidopsis thaliana]
Length = 1274
Score = 46.2 bits (108), Expect(2) = 1e-09
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +3
Query: 6 WITGCRGCTFLSIIVNGRPRDKILADRGLRQGDLLSPFLFII 131
W+ C S ++NG P+ ++ RGLRQGD LSP+LFI+
Sbjct: 546 WVMQCVCTVSYSFLINGSPQGSVVPSRGLRQGDPLSPYLFIL 587
Score = 42.0 bits (97), Expect(2) = 1e-09
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +2
Query: 104 PIIPFPFHYFVDILCRLMGKAKEKHVVEGFVIGKEKANLSHLQYADDTLFF 256
P+ P+ F ++L L KA+EK V+ G + + ++HL +ADDT+FF
Sbjct: 579 PLSPYLFILCTEVLSGLCRKAQEKGVMVGIRVARGSPQVNHLLFADDTMFF 629
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 49.7 bits (117), Expect(2) = 3e-09
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +3
Query: 3 SWITGCRGCTFLSIIVNGRPRDKILADRGLRQGDLLSPFLFII 131
SWI C +++NG+P+ I+ +RGLRQGD LSP+LFI+
Sbjct: 388 SWIMWCITTVQYKVLINGQPKGLIIPERGLRQGDPLSPYLFIL 430
Score = 37.4 bits (85), Expect(2) = 3e-09
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +2
Query: 104 PIIPFPFHYFVDILCRLMGKAKEKHVVEGFVIGKEKANLSHLQYADDTLFF 256
P+ P+ F ++L + KA+ ++++ G + +SHL +ADD+LFF
Sbjct: 422 PLSPYLFILCTEVLIANIRKAERQNLITGIKVATPSPAVSHLLFADDSLFF 472
>emb|CAN62630.1| hypothetical protein VITISV_031438 [Vitis vinifera]
Length = 767
Score = 46.2 bits (108), Expect(2) = 3e-09
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +3
Query: 3 SWITGCRGCTFLSIIVNGRPRDKILADRGLRQGDLLSPFLFII 131
SW+ C + +I+VNG + + A R LRQGD LSPFLF++
Sbjct: 290 SWMRDCLSSSSFAILVNGNAKGWVKASRSLRQGDPLSPFLFLV 332
Score = 40.4 bits (93), Expect(2) = 3e-09
Identities = 19/46 (41%), Positives = 30/46 (65%)
Frame = +2
Query: 104 PIIPFPFHYFVDILCRLMGKAKEKHVVEGFVIGKEKANLSHLQYAD 241
P+ PF F D+L RLM +A+E + EGF +G+++ +S LQ+ D
Sbjct: 324 PLSPFLF-LVADVLSRLMIRAEETGITEGFFVGRDRTRVSLLQFXD 368
>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1715
Score = 45.1 bits (105), Expect(2) = 4e-09
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +3
Query: 6 WITGCRGCTFLSIIVNGRPRDKILADRGLRQGDLLSPFLFI 128
WI C +++NG P KI RG+RQGD LSP+LF+
Sbjct: 967 WIMTCVTSVSYEVLINGSPYGKIFPSRGIRQGDPLSPYLFL 1007
Score = 41.2 bits (95), Expect(2) = 4e-09
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +2
Query: 104 PIIPFPFHYFVDILCRLMGKAKEKHVVEGFVIGKEKANLSHLQYADDTLFF 256
P+ P+ F + ++L ++ KA+ + G I K+ +SHL +ADD+LFF
Sbjct: 1000 PLSPYLFLFCAEVLSNMLRKAEVNKQIHGMKITKDCLAISHLLFADDSLFF 1050
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 43.9 bits (102), Expect(2) = 6e-09
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +3
Query: 9 ITGCRGCTFLSIIVNGRPRDKILADRGLRQGDLLSPFLFII 131
+ C S++VNG+P RGLRQGD LSPFLF++
Sbjct: 615 VMNCVTSARFSVLVNGQPSRNFFPSRGLRQGDPLSPFLFVV 655
Score = 42.0 bits (97), Expect(2) = 6e-09
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +2
Query: 104 PIIPFPFHYFVDILCRLMGKAKEKHVVEGFVIGKEKANLSHLQYADDTLFFL 259
P+ PF F + L L+ A+EK V+ G IG + +SHL +ADD+L F+
Sbjct: 647 PLSPFLFVVCAEGLSTLLRDAEEKKVIHGVKIGHRVSPISHLFFADDSLLFI 698
>emb|CAN70443.1| hypothetical protein VITISV_015572 [Vitis vinifera]
Length = 1119
Score = 49.7 bits (117), Expect(2) = 7e-09
Identities = 21/51 (41%), Positives = 35/51 (68%)
Frame = +2
Query: 104 PIIPFPFHYFVDILCRLMGKAKEKHVVEGFVIGKEKANLSHLQYADDTLFF 256
PI F F D+L R++ +A+++ ++EGF +G + +SHLQ+ADDT+ F
Sbjct: 936 PISHFLFTITADVLSRMLLRAEKRSLLEGFSVGGNRTRVSHLQFADDTIIF 986
Score = 35.8 bits (81), Expect(2) = 7e-09
Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +3
Query: 6 WITGCRGC---TFLSIIVNGRPRDKILADRGLRQGDLLSPFLFII 131
W T RGC +I+VN A RGLRQGD +S FLF I
Sbjct: 900 WRTXMRGCLSSVSYAILVNXNAXGWXKATRGLRQGDPISHFLFTI 944
>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
Length = 1023
Score = 48.1 bits (113), Expect(2) = 1e-08
Identities = 22/43 (51%), Positives = 29/43 (67%)
Frame = +3
Query: 3 SWITGCRGCTFLSIIVNGRPRDKILADRGLRQGDLLSPFLFII 131
SWI C +++NG+PR I+ RGLRQGD LSP+LFI+
Sbjct: 454 SWIMWCITTVQYRVLLNGQPRGLIVPKRGLRQGDPLSPYLFIL 496
Score = 36.6 bits (83), Expect(2) = 1e-08
Identities = 15/51 (29%), Positives = 31/51 (60%)
Frame = +2
Query: 104 PIIPFPFHYFVDILCRLMGKAKEKHVVEGFVIGKEKANLSHLQYADDTLFF 256
P+ P+ F ++L + KA+++ ++ G + ++SHL +A+D+LFF
Sbjct: 488 PLSPYLFILCTEVLIANIRKAEQEKLITGIKVATASPSVSHLLFANDSLFF 538
>emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1383
Score = 45.4 bits (106), Expect(2) = 2e-08
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = +3
Query: 3 SWITGCRGCTFLSIIVNGRPRDKILADRGLRQGDLLSPFLF 125
+W+ C SI++NG P I RGLRQGD LSPFLF
Sbjct: 601 AWMKSCVMSASASILINGSPTQPIKLQRGLRQGDPLSPFLF 641
Score = 38.5 bits (88), Expect(2) = 2e-08
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = +2
Query: 104 PIIPFPFHYFVDILCRLMGKAKEKHVVEGFVIGKEKANLSHLQYADDTLFF 256
P+ PF F+ V+ L LM K + EG +SHLQYADDT+ F
Sbjct: 635 PLSPFLFNLAVEPLNLLMKKGLNMRLWEGIASRPNGYIISHLQYADDTIIF 685
>ref|XP_006582707.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 507
Score = 43.1 bits (100), Expect(2) = 2e-08
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +3
Query: 3 SWITGCRGCTFLSIIVNGRPRDKILADRGLRQGDLLSPFLF 125
SWI GC + I+VNG P + +GLRQGD L+ FLF
Sbjct: 72 SWIKGCLTSASIYILVNGSPTTEFKPKKGLRQGDPLASFLF 112
Score = 40.8 bits (94), Expect(2) = 2e-08
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +2
Query: 104 PIIPFPFHYFVDILCRLMGKAKEKHVVEGFVIGKEKANLSHLQYADDTLFF 256
P+ F F + L LM + K+ + F++GK K ++ LQYADDT+FF
Sbjct: 106 PLASFLFDLVDEGLIGLMREVITKNYFQSFLVGKNKVPMNILQYADDTIFF 156
>ref|XP_007214027.1| hypothetical protein PRUPE_ppa016677mg [Prunus persica]
gi|462409892|gb|EMJ15226.1| hypothetical protein
PRUPE_ppa016677mg [Prunus persica]
Length = 1421
Score = 56.2 bits (134), Expect(2) = 3e-08
Identities = 25/44 (56%), Positives = 31/44 (70%)
Frame = +3
Query: 6 WITGCRGCTFLSIIVNGRPRDKILADRGLRQGDLLSPFLFIILL 137
WI GC SI++NG+PR K A RGLRQGD LSPFLF +++
Sbjct: 878 WIIGCLESVNFSIMINGKPRGKFRASRGLRQGDPLSPFLFTLVM 921
Score = 26.9 bits (58), Expect(2) = 3e-08
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +2
Query: 218 LSHLQYADDTLFFL 259
+SHLQ+ADDT+F L
Sbjct: 923 VSHLQFADDTIFLL 936