BLASTX nr result
ID: Cocculus23_contig00055540
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00055540
(265 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002536106.1| pentatricopeptide repeat-containing protein,... 147 2e-33
ref|XP_002310592.2| pentatricopeptide repeat-containing family p... 146 3e-33
ref|XP_004306202.1| PREDICTED: pentatricopeptide repeat-containi... 145 4e-33
ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containi... 145 6e-33
gb|EXB80846.1| hypothetical protein L484_020104 [Morus notabilis] 145 8e-33
ref|XP_004237612.1| PREDICTED: pentatricopeptide repeat-containi... 142 6e-32
ref|XP_006428089.1| hypothetical protein CICLE_v10027512mg [Citr... 141 8e-32
ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containi... 140 1e-31
ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containi... 140 1e-31
ref|XP_006354721.1| PREDICTED: pentatricopeptide repeat-containi... 139 3e-31
ref|XP_006296049.1| hypothetical protein CARUB_v10025197mg [Caps... 139 3e-31
ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containi... 138 7e-31
ref|XP_007048080.1| Pentatricopeptide (PPR) repeat-containing pr... 137 2e-30
ref|XP_002878586.1| pentatricopeptide repeat-containing protein ... 135 6e-30
ref|NP_179798.1| pentatricopeptide repeat-containing protein [Ar... 135 6e-30
ref|XP_007143255.1| hypothetical protein PHAVU_007G057100g [Phas... 133 2e-29
ref|XP_004496732.1| PREDICTED: pentatricopeptide repeat-containi... 133 2e-29
gb|EYU31065.1| hypothetical protein MIMGU_mgv1a025575mg [Mimulus... 132 4e-29
ref|XP_006404655.1| hypothetical protein EUTSA_v10000053mg [Eutr... 130 1e-28
ref|XP_004981586.1| PREDICTED: pentatricopeptide repeat-containi... 124 1e-26
>ref|XP_002536106.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223520840|gb|EEF26277.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 519
Score = 147 bits (371), Expect = 2e-33
Identities = 69/88 (78%), Positives = 75/88 (85%)
Frame = -1
Query: 265 HGLGEEAIKLFEKMRGLGVNPDHITYVGVISACTHAGLVEQGRNYFATMQRVHKIEPTPS 86
HGLG+E+I+LFEKM LG+ PDHITYVGV+SACTH GLVEQGR YF M +HKIEPT S
Sbjct: 418 HGLGQESIELFEKMLALGIKPDHITYVGVLSACTHVGLVEQGRGYFNLMTSIHKIEPTLS 477
Query: 85 HYACMIDLFGRAGLLQEAQDFIEKMPIE 2
HYACMIDLFGRAGLLQEA FIE MPIE
Sbjct: 478 HYACMIDLFGRAGLLQEAFSFIENMPIE 505
>ref|XP_002310592.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550334248|gb|EEE91042.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 785
Score = 146 bits (369), Expect = 3e-33
Identities = 67/88 (76%), Positives = 77/88 (87%)
Frame = -1
Query: 265 HGLGEEAIKLFEKMRGLGVNPDHITYVGVISACTHAGLVEQGRNYFATMQRVHKIEPTPS 86
HGLGEEAI+LFE+M LG+ PDHITYVGV+SACTH GLVEQGR+YF M+ VHKI+PT S
Sbjct: 492 HGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLS 551
Query: 85 HYACMIDLFGRAGLLQEAQDFIEKMPIE 2
HYACM+DLFGRAGLLQEA F+E MP+E
Sbjct: 552 HYACMVDLFGRAGLLQEAYKFVENMPME 579
>ref|XP_004306202.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Fragaria vesca subsp. vesca]
Length = 1013
Score = 145 bits (367), Expect = 4e-33
Identities = 67/88 (76%), Positives = 76/88 (86%)
Frame = -1
Query: 265 HGLGEEAIKLFEKMRGLGVNPDHITYVGVISACTHAGLVEQGRNYFATMQRVHKIEPTPS 86
HGLGEE+I+LFEKM LG+ PDHITYVGV+SACTH GLVEQGR+Y+ M+ VHKIEPT S
Sbjct: 720 HGLGEESIELFEKMLSLGIRPDHITYVGVLSACTHVGLVEQGRSYYNLMRSVHKIEPTHS 779
Query: 85 HYACMIDLFGRAGLLQEAQDFIEKMPIE 2
HYACM+DL GRAGLLQEA D I+ MPIE
Sbjct: 780 HYACMVDLLGRAGLLQEAYDVIQNMPIE 807
>ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 145 bits (366), Expect = 6e-33
Identities = 68/88 (77%), Positives = 74/88 (84%)
Frame = -1
Query: 265 HGLGEEAIKLFEKMRGLGVNPDHITYVGVISACTHAGLVEQGRNYFATMQRVHKIEPTPS 86
HGLGEEA+ LFE+M G+ PDHITYVGV+SACTH GLVEQGR+Y+ MQ HKI PTPS
Sbjct: 492 HGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPS 551
Query: 85 HYACMIDLFGRAGLLQEAQDFIEKMPIE 2
HYACMIDLFGRAGLLQEA FIE MPIE
Sbjct: 552 HYACMIDLFGRAGLLQEAHAFIENMPIE 579
>gb|EXB80846.1| hypothetical protein L484_020104 [Morus notabilis]
Length = 799
Score = 145 bits (365), Expect = 8e-33
Identities = 66/88 (75%), Positives = 77/88 (87%)
Frame = -1
Query: 265 HGLGEEAIKLFEKMRGLGVNPDHITYVGVISACTHAGLVEQGRNYFATMQRVHKIEPTPS 86
HGLGEE+++LFE M LG+ PDHITYVGV+SACTH GLV+QGR+Y+ M+ VHKIEPT S
Sbjct: 492 HGLGEESVELFETMLALGIKPDHITYVGVLSACTHVGLVDQGRSYYNLMRNVHKIEPTLS 551
Query: 85 HYACMIDLFGRAGLLQEAQDFIEKMPIE 2
HY+CMIDLFGRAGLLQEA DFI+ MPIE
Sbjct: 552 HYSCMIDLFGRAGLLQEAFDFIKSMPIE 579
>ref|XP_004237612.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Solanum lycopersicum]
Length = 786
Score = 142 bits (357), Expect = 6e-32
Identities = 65/88 (73%), Positives = 74/88 (84%)
Frame = -1
Query: 265 HGLGEEAIKLFEKMRGLGVNPDHITYVGVISACTHAGLVEQGRNYFATMQRVHKIEPTPS 86
HGLG EA++LFE M LG+ PDHITYVGV++ACTH GLV QGRNY+ M+ +H IEPT S
Sbjct: 493 HGLGAEALQLFENMLALGMKPDHITYVGVLNACTHVGLVAQGRNYYKMMKEIHGIEPTSS 552
Query: 85 HYACMIDLFGRAGLLQEAQDFIEKMPIE 2
H ACMIDLFGRAGLL+EAQDFIE MPIE
Sbjct: 553 HCACMIDLFGRAGLLEEAQDFIENMPIE 580
>ref|XP_006428089.1| hypothetical protein CICLE_v10027512mg [Citrus clementina]
gi|568819548|ref|XP_006464311.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g22070-like [Citrus sinensis]
gi|557530079|gb|ESR41329.1| hypothetical protein
CICLE_v10027512mg [Citrus clementina]
Length = 785
Score = 141 bits (356), Expect = 8e-32
Identities = 64/88 (72%), Positives = 76/88 (86%)
Frame = -1
Query: 265 HGLGEEAIKLFEKMRGLGVNPDHITYVGVISACTHAGLVEQGRNYFATMQRVHKIEPTPS 86
HGLGEEAI+LFE+M LG+ PDHITYVGV++ACTH GLVEQGR Y+ M+ VHKI+PTPS
Sbjct: 492 HGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGRRYYNMMKNVHKIKPTPS 551
Query: 85 HYACMIDLFGRAGLLQEAQDFIEKMPIE 2
H+A M+DL GRAGLLQEA +FIE MP+E
Sbjct: 552 HFASMVDLLGRAGLLQEAYNFIENMPLE 579
>ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 140 bits (354), Expect = 1e-31
Identities = 66/88 (75%), Positives = 74/88 (84%)
Frame = -1
Query: 265 HGLGEEAIKLFEKMRGLGVNPDHITYVGVISACTHAGLVEQGRNYFATMQRVHKIEPTPS 86
HGLG+EAI LFE+M +G+ PDHITYVGV+SACTH GLVEQGR Y+ M VH+IEPT S
Sbjct: 489 HGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLS 548
Query: 85 HYACMIDLFGRAGLLQEAQDFIEKMPIE 2
HYACMIDL+GRAGLLQEA FIE MPIE
Sbjct: 549 HYACMIDLYGRAGLLQEAYLFIESMPIE 576
>ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 140 bits (354), Expect = 1e-31
Identities = 66/88 (75%), Positives = 74/88 (84%)
Frame = -1
Query: 265 HGLGEEAIKLFEKMRGLGVNPDHITYVGVISACTHAGLVEQGRNYFATMQRVHKIEPTPS 86
HGLG+EAI LFE+M +G+ PDHITYVGV+SACTH GLVEQGR Y+ M VH+IEPT S
Sbjct: 489 HGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLS 548
Query: 85 HYACMIDLFGRAGLLQEAQDFIEKMPIE 2
HYACMIDL+GRAGLLQEA FIE MPIE
Sbjct: 549 HYACMIDLYGRAGLLQEAYLFIESMPIE 576
>ref|XP_006354721.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Solanum tuberosum]
Length = 786
Score = 139 bits (351), Expect = 3e-31
Identities = 63/88 (71%), Positives = 74/88 (84%)
Frame = -1
Query: 265 HGLGEEAIKLFEKMRGLGVNPDHITYVGVISACTHAGLVEQGRNYFATMQRVHKIEPTPS 86
HGLG EA++LFE M LG+ PDHITYVGV++ACTH GL+ QGR+Y+ M+ +H IEPT S
Sbjct: 493 HGLGAEALQLFENMLALGMKPDHITYVGVLTACTHVGLIAQGRSYYKMMKEIHGIEPTSS 552
Query: 85 HYACMIDLFGRAGLLQEAQDFIEKMPIE 2
H ACMIDLFGRAGLL+EAQDFIE MPIE
Sbjct: 553 HCACMIDLFGRAGLLEEAQDFIENMPIE 580
>ref|XP_006296049.1| hypothetical protein CARUB_v10025197mg [Capsella rubella]
gi|482564757|gb|EOA28947.1| hypothetical protein
CARUB_v10025197mg [Capsella rubella]
Length = 795
Score = 139 bits (351), Expect = 3e-31
Identities = 67/88 (76%), Positives = 74/88 (84%)
Frame = -1
Query: 265 HGLGEEAIKLFEKMRGLGVNPDHITYVGVISACTHAGLVEQGRNYFATMQRVHKIEPTPS 86
HG EEA++LFE M G+ PDHITYVGV SACTHAGLV QGR YF M+ V+KIEPT S
Sbjct: 502 HGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFHMMKDVYKIEPTLS 561
Query: 85 HYACMIDLFGRAGLLQEAQDFIEKMPIE 2
HYACM+DLFGRAGLLQEAQ+FIEKMPIE
Sbjct: 562 HYACMVDLFGRAGLLQEAQEFIEKMPIE 589
>ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like isoform X1 [Glycine max]
gi|571439750|ref|XP_006574948.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g22070-like isoform X2 [Glycine max]
Length = 785
Score = 138 bits (348), Expect = 7e-31
Identities = 64/88 (72%), Positives = 73/88 (82%)
Frame = -1
Query: 265 HGLGEEAIKLFEKMRGLGVNPDHITYVGVISACTHAGLVEQGRNYFATMQRVHKIEPTPS 86
HGLG EAI+LFEKM + + PDHITYVGV+SACTH GLVEQG++YF M+ VH IEPT S
Sbjct: 492 HGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSS 551
Query: 85 HYACMIDLFGRAGLLQEAQDFIEKMPIE 2
HYACMIDL GRAGLL+EA +FI MPIE
Sbjct: 552 HYACMIDLLGRAGLLEEAYNFIRNMPIE 579
>ref|XP_007048080.1| Pentatricopeptide (PPR) repeat-containing protein [Theobroma cacao]
gi|508700341|gb|EOX92237.1| Pentatricopeptide (PPR)
repeat-containing protein [Theobroma cacao]
Length = 782
Score = 137 bits (345), Expect = 2e-30
Identities = 63/88 (71%), Positives = 73/88 (82%)
Frame = -1
Query: 265 HGLGEEAIKLFEKMRGLGVNPDHITYVGVISACTHAGLVEQGRNYFATMQRVHKIEPTPS 86
HGLGEEA++LFE++ G+ PDHITYVGV+SACTH GLVEQG Y+ M+ HKIEPT S
Sbjct: 489 HGLGEEALELFEELLAAGIKPDHITYVGVLSACTHVGLVEQGHRYYNMMKDFHKIEPTLS 548
Query: 85 HYACMIDLFGRAGLLQEAQDFIEKMPIE 2
HYA M+DL GRAGL+QEA DFIEKMPIE
Sbjct: 549 HYALMVDLLGRAGLVQEAYDFIEKMPIE 576
>ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297324425|gb|EFH54845.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 786
Score = 135 bits (340), Expect = 6e-30
Identities = 66/88 (75%), Positives = 72/88 (81%)
Frame = -1
Query: 265 HGLGEEAIKLFEKMRGLGVNPDHITYVGVISACTHAGLVEQGRNYFATMQRVHKIEPTPS 86
HG EEA++LFE M G+ PDHITYVGV SACTHAGLV QGR YF M+ V KI PT S
Sbjct: 493 HGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLS 552
Query: 85 HYACMIDLFGRAGLLQEAQDFIEKMPIE 2
HYACM+DLFGRAGLLQEAQ+FIEKMPIE
Sbjct: 553 HYACMVDLFGRAGLLQEAQEFIEKMPIE 580
>ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g22070 gi|4587589|gb|AAD25817.1| hypothetical protein
[Arabidopsis thaliana] gi|330252165|gb|AEC07259.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 786
Score = 135 bits (340), Expect = 6e-30
Identities = 66/88 (75%), Positives = 72/88 (81%)
Frame = -1
Query: 265 HGLGEEAIKLFEKMRGLGVNPDHITYVGVISACTHAGLVEQGRNYFATMQRVHKIEPTPS 86
HG EEA++LFE M G+ PDHITYVGV SACTHAGLV QGR YF M+ V KI PT S
Sbjct: 493 HGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLS 552
Query: 85 HYACMIDLFGRAGLLQEAQDFIEKMPIE 2
HYACM+DLFGRAGLLQEAQ+FIEKMPIE
Sbjct: 553 HYACMVDLFGRAGLLQEAQEFIEKMPIE 580
>ref|XP_007143255.1| hypothetical protein PHAVU_007G057100g [Phaseolus vulgaris]
gi|561016445|gb|ESW15249.1| hypothetical protein
PHAVU_007G057100g [Phaseolus vulgaris]
Length = 786
Score = 133 bits (335), Expect = 2e-29
Identities = 62/88 (70%), Positives = 72/88 (81%)
Frame = -1
Query: 265 HGLGEEAIKLFEKMRGLGVNPDHITYVGVISACTHAGLVEQGRNYFATMQRVHKIEPTPS 86
HGLG AI+LFEKM + + PDHITYV V+SACTH GLVEQG++YF M+ VH IEPT S
Sbjct: 493 HGLGNVAIELFEKMLKINLKPDHITYVSVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSS 552
Query: 85 HYACMIDLFGRAGLLQEAQDFIEKMPIE 2
HYACMIDL GRAGLL+EA +FI+ MPIE
Sbjct: 553 HYACMIDLLGRAGLLEEAYNFIKTMPIE 580
>ref|XP_004496732.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cicer arietinum]
Length = 782
Score = 133 bits (335), Expect = 2e-29
Identities = 63/88 (71%), Positives = 71/88 (80%)
Frame = -1
Query: 265 HGLGEEAIKLFEKMRGLGVNPDHITYVGVISACTHAGLVEQGRNYFATMQRVHKIEPTPS 86
HGLG EAI+LFE M + PDHITYVGV+SACTH GLVEQG+ YF M+ V+ IEPT S
Sbjct: 489 HGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKCYFNLMKNVYHIEPTAS 548
Query: 85 HYACMIDLFGRAGLLQEAQDFIEKMPIE 2
HYACMIDLFGRAGLL+EA +FI MPIE
Sbjct: 549 HYACMIDLFGRAGLLEEAYNFIRSMPIE 576
>gb|EYU31065.1| hypothetical protein MIMGU_mgv1a025575mg [Mimulus guttatus]
Length = 783
Score = 132 bits (333), Expect = 4e-29
Identities = 60/88 (68%), Positives = 73/88 (82%)
Frame = -1
Query: 265 HGLGEEAIKLFEKMRGLGVNPDHITYVGVISACTHAGLVEQGRNYFATMQRVHKIEPTPS 86
HGL + A++LFEKM L + PDHITY+GV+SACTHAGLVE+GR+YF M+ +H +EPT S
Sbjct: 490 HGLADMALELFEKMLSLDIKPDHITYIGVLSACTHAGLVEKGRSYFKKMKDLHGVEPTSS 549
Query: 85 HYACMIDLFGRAGLLQEAQDFIEKMPIE 2
H ACM+DLFGRAGLL EAQDFI+ M IE
Sbjct: 550 HCACMVDLFGRAGLLDEAQDFIKNMKIE 577
>ref|XP_006404655.1| hypothetical protein EUTSA_v10000053mg [Eutrema salsugineum]
gi|557105783|gb|ESQ46108.1| hypothetical protein
EUTSA_v10000053mg [Eutrema salsugineum]
Length = 785
Score = 130 bits (328), Expect = 1e-28
Identities = 63/88 (71%), Positives = 69/88 (78%)
Frame = -1
Query: 265 HGLGEEAIKLFEKMRGLGVNPDHITYVGVISACTHAGLVEQGRNYFATMQRVHKIEPTPS 86
HG EEA++LFE M + PDHITYVGV SACTHAGLV QGR YF M+ V KIEPT S
Sbjct: 492 HGHAEEALELFESMLMEKLRPDHITYVGVFSACTHAGLVNQGRQYFDRMKNVDKIEPTLS 551
Query: 85 HYACMIDLFGRAGLLQEAQDFIEKMPIE 2
HYACM+DLFGRAGLLQEA +F E MPIE
Sbjct: 552 HYACMVDLFGRAGLLQEAHEFTENMPIE 579
>ref|XP_004981586.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Setaria italica]
Length = 803
Score = 124 bits (311), Expect = 1e-26
Identities = 55/87 (63%), Positives = 69/87 (79%)
Frame = -1
Query: 265 HGLGEEAIKLFEKMRGLGVNPDHITYVGVISACTHAGLVEQGRNYFATMQRVHKIEPTPS 86
HGLGEEA+ LFE+M +GV PD ITY+G+ SACTHAG V++G+ Y+ MQ H I P S
Sbjct: 510 HGLGEEAVGLFEQMLRVGVKPDRITYIGLFSACTHAGFVDKGKRYYDQMQNEHGIVPEMS 569
Query: 85 HYACMIDLFGRAGLLQEAQDFIEKMPI 5
HYACM+DLF RAGLL EAQ+FI++MP+
Sbjct: 570 HYACMVDLFARAGLLTEAQEFIQRMPV 596