BLASTX nr result
ID: Cocculus23_contig00055420
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00055420
(243 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN71812.1| hypothetical protein VITISV_037409 [Vitis vinifera] 48 1e-10
emb|CAN66675.1| hypothetical protein VITISV_004941 [Vitis vinifera] 46 5e-10
gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa] 43 9e-10
emb|CAN76400.1| hypothetical protein VITISV_001550 [Vitis vinifera] 45 2e-09
ref|XP_002274088.2| PREDICTED: uncharacterized protein LOC100259... 47 2e-09
gb|ABA95230.1| retrotransposon protein, putative, unclassified [... 42 4e-09
emb|CAN76585.1| hypothetical protein VITISV_020286 [Vitis vinifera] 44 6e-09
emb|CAN76634.1| hypothetical protein VITISV_019994 [Vitis vinifera] 42 6e-09
emb|CAN77135.1| hypothetical protein VITISV_021719 [Vitis vinifera] 45 7e-09
emb|CAN67506.1| hypothetical protein VITISV_026948 [Vitis vinifera] 43 7e-09
gb|ABA94321.1| retrotransposon protein, putative, unclassified [... 40 9e-09
emb|CAN68682.1| hypothetical protein VITISV_024814 [Vitis vinifera] 44 9e-09
emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group] 40 9e-09
emb|CAH67874.1| OSIGBa0153E02-OSIGBa0093I20.3 [Oryza sativa Indi... 40 9e-09
emb|CAN61660.1| hypothetical protein VITISV_000260 [Vitis vinifera] 42 1e-08
emb|CAN80285.1| hypothetical protein VITISV_026753 [Vitis vinifera] 44 1e-08
emb|CAN81752.1| hypothetical protein VITISV_012353 [Vitis vinifera] 43 1e-08
ref|XP_003597218.1| Beta-galactosidase [Medicago truncatula] gi|... 45 1e-08
gb|AAM91874.1| putative copia-like polyprotein [Oryza sativa Jap... 40 2e-08
emb|CAN79977.1| hypothetical protein VITISV_029183 [Vitis vinifera] 44 2e-08
>emb|CAN71812.1| hypothetical protein VITISV_037409 [Vitis vinifera]
Length = 621
Score = 48.1 bits (113), Expect(2) = 1e-10
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = +2
Query: 5 ERYKG*LVAKVYTQFYRVDYREIFALVAKLNMVGV 109
ERYK LVAK YTQ Y +DY+E FALVAK+N V V
Sbjct: 207 ERYKARLVAKGYTQTYGIDYQETFALVAKMNTVRV 241
Score = 43.1 bits (100), Expect(2) = 1e-10
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 120 LAANFGWNLQQFDVKNAFLHRSSGGDLYEGSP 215
LAAN+ W+LQQFDVKNAFLH ++Y P
Sbjct: 245 LAANYNWDLQQFDVKNAFLHGELEEEIYMEVP 276
>emb|CAN66675.1| hypothetical protein VITISV_004941 [Vitis vinifera]
Length = 397
Score = 46.2 bits (108), Expect(2) = 5e-10
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +2
Query: 5 ERYKG*LVAKVYTQFYRVDYREIFALVAKLNMVGV 109
ERYK LVAK YTQ + +DY+E FALVAK+N+V +
Sbjct: 268 ERYKVRLVAKGYTQTHEIDYQETFALVAKMNIVRI 302
Score = 43.1 bits (100), Expect(2) = 5e-10
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = +3
Query: 120 LAANFGWNLQQFDVKNAFLHRSSGGDLYEGSPMRF 224
LA NF W LQQFDVKNAFLH +LY P F
Sbjct: 306 LATNFDWPLQQFDVKNAFLHGDLXEELYMELPPGF 340
>gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]
Length = 1180
Score = 42.7 bits (99), Expect(3) = 9e-10
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = +2
Query: 5 ERYKG*LVAKVYTQFYRVDYREIFALVAKLNMVGV 109
+RYK LVAK YTQ Y VDY E FA VAK+N + V
Sbjct: 728 DRYKARLVAKGYTQKYGVDYDETFAPVAKINTIRV 762
Score = 42.0 bits (97), Expect(3) = 9e-10
Identities = 21/29 (72%), Positives = 22/29 (75%)
Frame = +3
Query: 120 LAANFGWNLQQFDVKNAFLHRSSGGDLYE 206
LAAN W LQQFDVKNAFLH GDL+E
Sbjct: 766 LAANLDWPLQQFDVKNAFLH----GDLHE 790
Score = 23.1 bits (48), Expect(3) = 9e-10
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 181 DLAEEIYMKVPP*GFSLHEGK 243
DL EE+YM +PP G+ G+
Sbjct: 787 DLHEEVYMDLPP-GYGTSTGE 806
>emb|CAN76400.1| hypothetical protein VITISV_001550 [Vitis vinifera]
Length = 626
Score = 45.1 bits (105), Expect(2) = 2e-09
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +2
Query: 5 ERYKG*LVAKVYTQFYRVDYREIFALVAKLNMVGV 109
ERYK LVAK YTQ Y +DY+E FA +AK+N V V
Sbjct: 207 ERYKARLVAKGYTQTYGIDYQETFAPIAKMNTVRV 241
Score = 42.7 bits (99), Expect(2) = 2e-09
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +3
Query: 120 LAANFGWNLQQFDVKNAFLHRSSGGDLYEGSPMRF 224
L AN+ W+LQQFDVKNAFLH ++Y P+ +
Sbjct: 245 LVANYNWDLQQFDVKNAFLHGELEEEIYMEVPLGY 279
>ref|XP_002274088.2| PREDICTED: uncharacterized protein LOC100259102 [Vitis vinifera]
Length = 1624
Score = 46.6 bits (109), Expect(2) = 2e-09
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = +2
Query: 5 ERYKG*LVAKVYTQFYRVDYREIFALVAKLNMVGV 109
ERYK LVAK +TQ YRVDY+E F+ VAKLN V V
Sbjct: 719 ERYKARLVAKGFTQTYRVDYQETFSPVAKLNTVRV 753
Score = 40.4 bits (93), Expect(2) = 2e-09
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = +3
Query: 120 LAANFGWNLQQFDVKNAFLHRSSGGDLYEGSP 215
LAAN W L QFDVKNAFLH D+Y P
Sbjct: 757 LAANLDWPLHQFDVKNAFLHGDLEEDIYMDIP 788
>gb|ABA95230.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 936
Score = 42.4 bits (98), Expect(3) = 4e-09
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = +2
Query: 5 ERYKG*LVAKVYTQFYRVDYREIFALVAKLNMV 103
ERYK LVAK Y+Q Y +DY E FA VAK++MV
Sbjct: 485 ERYKARLVAKGYSQTYGIDYDETFAPVAKMSMV 517
Score = 37.4 bits (85), Expect(3) = 4e-09
Identities = 19/28 (67%), Positives = 19/28 (67%)
Frame = +3
Query: 123 AANFGWNLQQFDVKNAFLHRSSGGDLYE 206
AANF W L Q DVKNAFLH GDL E
Sbjct: 524 AANFDWPLHQLDVKNAFLH----GDLQE 547
Score = 25.8 bits (55), Expect(3) = 4e-09
Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
Frame = +1
Query: 181 DLAEEIYMKVPP*GF--SLHEGK 243
DL EE+YM++PP GF S EGK
Sbjct: 544 DLQEEVYMEIPP-GFATSQTEGK 565
>emb|CAN76585.1| hypothetical protein VITISV_020286 [Vitis vinifera]
Length = 957
Score = 43.5 bits (101), Expect(2) = 6e-09
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = +2
Query: 5 ERYKG*LVAKVYTQFYRVDYREIFALVAKLNMVGV 109
ER+K LVAK YTQ Y +DY E FA VAK+N V V
Sbjct: 578 ERFKARLVAKEYTQTYGIDYTETFAPVAKINTVRV 612
Score = 42.4 bits (98), Expect(2) = 6e-09
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = +3
Query: 120 LAANFGWNLQQFDVKNAFLHRSSGGDLYEGSPM 218
LAAN W LQQFDVKNAFLH ++Y P+
Sbjct: 616 LAANLNWPLQQFDVKNAFLHGELSEEVYMDLPL 648
>emb|CAN76634.1| hypothetical protein VITISV_019994 [Vitis vinifera]
Length = 457
Score = 42.4 bits (98), Expect(3) = 6e-09
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = +2
Query: 5 ERYKG*LVAKVYTQFYRVDYREIFALVAKLNMVGV 109
ERYK LVAK YTQ Y +DY+E F+ VAKL V V
Sbjct: 326 ERYKARLVAKGYTQKYGIDYQETFSPVAKLKTVRV 360
Score = 38.9 bits (89), Expect(3) = 6e-09
Identities = 20/29 (68%), Positives = 20/29 (68%)
Frame = +3
Query: 120 LAANFGWNLQQFDVKNAFLHRSSGGDLYE 206
LAAN W L QFDVKNAFLH GDL E
Sbjct: 364 LAANLNWPLHQFDVKNAFLH----GDLKE 388
Score = 23.9 bits (50), Expect(3) = 6e-09
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 181 DLAEEIYMKVPP 216
DL EE+YM +PP
Sbjct: 385 DLKEEVYMDIPP 396
>emb|CAN77135.1| hypothetical protein VITISV_021719 [Vitis vinifera]
Length = 1087
Score = 44.7 bits (104), Expect(2) = 7e-09
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +2
Query: 5 ERYKG*LVAKVYTQFYRVDYREIFALVAKLNMVGV 109
ER+K LVAK YTQ Y VDY+E F LVAK+N V +
Sbjct: 748 ERHKARLVAKWYTQTYGVDYQETFVLVAKMNTVRI 782
Score = 40.8 bits (94), Expect(2) = 7e-09
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +3
Query: 120 LAANFGWNLQQFDVKNAFLHRSSGGDLYEGSPMRF 224
LAA++ W L Q+DVKNAFL+ ++Y P+RF
Sbjct: 786 LAAHYNWQLLQYDVKNAFLYGDLDEEIYMNIPLRF 820
>emb|CAN67506.1| hypothetical protein VITISV_026948 [Vitis vinifera]
Length = 1063
Score = 42.7 bits (99), Expect(3) = 7e-09
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = +2
Query: 5 ERYKG*LVAKVYTQFYRVDYREIFALVAKLNMVGV 109
ER+K LVAK YTQ Y +DY E FA VAK+N + V
Sbjct: 632 ERFKARLVAKGYTQTYGIDYTETFAPVAKINTIRV 666
Score = 40.8 bits (94), Expect(3) = 7e-09
Identities = 20/29 (68%), Positives = 22/29 (75%)
Frame = +3
Query: 120 LAANFGWNLQQFDVKNAFLHRSSGGDLYE 206
LAAN W LQQFDVKNAFLH G+L+E
Sbjct: 670 LAANLDWPLQQFDVKNAFLH----GELFE 694
Score = 21.2 bits (43), Expect(3) = 7e-09
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +1
Query: 181 DLAEEIYMKVPP 216
+L EE+YM +PP
Sbjct: 691 ELFEEVYMDLPP 702
>gb|ABA94321.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1133
Score = 40.4 bits (93), Expect(3) = 9e-09
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +2
Query: 5 ERYKG*LVAKVYTQFYRVDYREIFALVAKLNMV 103
+RYK LVAK Y+Q Y +DY EIFA VAK+ V
Sbjct: 801 DRYKARLVAKGYSQTYGIDYDEIFAPVAKMGTV 833
Score = 39.7 bits (91), Expect(3) = 9e-09
Identities = 19/28 (67%), Positives = 20/28 (71%)
Frame = +3
Query: 123 AANFGWNLQQFDVKNAFLHRSSGGDLYE 206
A NFGW L Q DVKNAFLH GDL+E
Sbjct: 840 AVNFGWPLHQLDVKNAFLH----GDLHE 863
Score = 24.3 bits (51), Expect(3) = 9e-09
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +1
Query: 181 DLAEEIYMKVPP 216
DL EE+YM++PP
Sbjct: 860 DLHEEVYMEIPP 871
>emb|CAN68682.1| hypothetical protein VITISV_024814 [Vitis vinifera]
Length = 1248
Score = 43.5 bits (101), Expect(2) = 9e-09
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = +2
Query: 5 ERYKG*LVAKVYTQFYRVDYREIFALVAKLNMVGV 109
ERYK LVAK Y Q Y +DY+E FA VAK+N V V
Sbjct: 828 ERYKARLVAKGYAQTYGIDYQETFAPVAKMNTVRV 862
Score = 41.6 bits (96), Expect(2) = 9e-09
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +3
Query: 120 LAANFGWNLQQFDVKNAFLHRSSGGDLYEGSP 215
L AN+ W+LQQFDVKNAFLH ++Y P
Sbjct: 866 LTANYNWDLQQFDVKNAFLHGELEEEIYMEVP 897
>emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group]
Length = 1015
Score = 40.0 bits (92), Expect(3) = 9e-09
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +2
Query: 5 ERYKG*LVAKVYTQFYRVDYREIFALVAKLNMV 103
ERYK LVAK Y+Q Y +DY E FA VAK++ V
Sbjct: 546 ERYKARLVAKGYSQTYGIDYDETFAPVAKMSTV 578
Score = 37.0 bits (84), Expect(3) = 9e-09
Identities = 19/28 (67%), Positives = 19/28 (67%)
Frame = +3
Query: 123 AANFGWNLQQFDVKNAFLHRSSGGDLYE 206
AANF W L Q DVKNAFLH GDL E
Sbjct: 585 AANFDWPLYQLDVKNAFLH----GDLQE 608
Score = 27.3 bits (59), Expect(3) = 9e-09
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 181 DLAEEIYMKVPP*GFSLHEGK 243
DL EE+YM++PP GFS + K
Sbjct: 605 DLQEEVYMEIPP-GFSTSQTK 624
>emb|CAH67874.1| OSIGBa0153E02-OSIGBa0093I20.3 [Oryza sativa Indica Group]
Length = 806
Score = 40.0 bits (92), Expect(3) = 9e-09
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +2
Query: 5 ERYKG*LVAKVYTQFYRVDYREIFALVAKLNMV 103
ERYK LVAK Y+Q Y +DY E FA VAK++ V
Sbjct: 355 ERYKARLVAKGYSQTYGIDYDETFAPVAKMSTV 387
Score = 37.0 bits (84), Expect(3) = 9e-09
Identities = 19/28 (67%), Positives = 19/28 (67%)
Frame = +3
Query: 123 AANFGWNLQQFDVKNAFLHRSSGGDLYE 206
AANF W L Q DVKNAFLH GDL E
Sbjct: 394 AANFDWPLYQLDVKNAFLH----GDLQE 417
Score = 27.3 bits (59), Expect(3) = 9e-09
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 181 DLAEEIYMKVPP*GFSLHEGK 243
DL EE+YM++PP GFS + K
Sbjct: 414 DLQEEVYMEIPP-GFSTSQTK 433
>emb|CAN61660.1| hypothetical protein VITISV_000260 [Vitis vinifera]
Length = 1087
Score = 42.0 bits (97), Expect(3) = 1e-08
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = +2
Query: 5 ERYKG*LVAKVYTQFYRVDYREIFALVAKLNMVGV 109
ER+K LVAK YTQ Y +DY E FA VAK+N + V
Sbjct: 677 ERFKARLVAKGYTQTYGIDYIETFAPVAKINTIRV 711
Score = 40.8 bits (94), Expect(3) = 1e-08
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = +3
Query: 120 LAANFGWNLQQFDVKNAFLHRSSGGDLYE 206
LAAN W LQQFDVKN FLH G+LYE
Sbjct: 715 LAANLDWPLQQFDVKNVFLH----GELYE 739
Score = 21.2 bits (43), Expect(3) = 1e-08
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +1
Query: 181 DLAEEIYMKVPP 216
+L EE+YM +PP
Sbjct: 736 ELYEEVYMDLPP 747
>emb|CAN80285.1| hypothetical protein VITISV_026753 [Vitis vinifera]
Length = 1387
Score = 44.3 bits (103), Expect(2) = 1e-08
Identities = 23/35 (65%), Positives = 26/35 (74%)
Frame = +2
Query: 5 ERYKG*LVAKVYTQFYRVDYREIFALVAKLNMVGV 109
ERYK LVAK +TQ Y VDY+E F+ VAKLN V V
Sbjct: 964 ERYKARLVAKGFTQTYXVDYQETFSPVAKLNTVRV 998
Score = 40.4 bits (93), Expect(2) = 1e-08
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = +3
Query: 120 LAANFGWNLQQFDVKNAFLHRSSGGDLYEGSP 215
LAAN W L QFDVKNAFLH D+Y P
Sbjct: 1002 LAANLDWPLHQFDVKNAFLHGDLEEDIYMDIP 1033
>emb|CAN81752.1| hypothetical protein VITISV_012353 [Vitis vinifera]
Length = 472
Score = 42.7 bits (99), Expect(2) = 1e-08
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = +2
Query: 5 ERYKG*LVAKVYTQFYRVDYREIFALVAKLNMVGV 109
ER+K LVAK YTQ Y VDY E FA VAK+N V +
Sbjct: 397 ERHKARLVAKWYTQTYGVDYXETFAPVAKMNTVRI 431
Score = 42.0 bits (97), Expect(2) = 1e-08
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +3
Query: 120 LAANFGWNLQQFDVKNAFLHRSSGGDLYEGSPMRF*ST 233
LAA++ W L Q+DVKNAFLH ++Y P RF T
Sbjct: 435 LAAHYNWQLLQYDVKNAFLHGDLDEEIYMNIPPRFEET 472
>ref|XP_003597218.1| Beta-galactosidase [Medicago truncatula] gi|355486266|gb|AES67469.1|
Beta-galactosidase [Medicago truncatula]
Length = 2260
Score = 44.7 bits (104), Expect(3) = 1e-08
Identities = 24/35 (68%), Positives = 25/35 (71%)
Frame = +2
Query: 5 ERYKG*LVAKVYTQFYRVDYREIFALVAKLNMVGV 109
ER+K LVAK YTQ Y VDY E FA VAKLN V V
Sbjct: 1489 ERFKARLVAKGYTQSYGVDYEETFAPVAKLNTVRV 1523
Score = 37.0 bits (84), Expect(3) = 1e-08
Identities = 20/29 (68%), Positives = 20/29 (68%)
Frame = +3
Query: 120 LAANFGWNLQQFDVKNAFLHRSSGGDLYE 206
LAAN W L QFDVKNAFLH GDL E
Sbjct: 1527 LAANQDWPLLQFDVKNAFLH----GDLIE 1551
Score = 21.9 bits (45), Expect(3) = 1e-08
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1
Query: 181 DLAEEIYMKVPP 216
DL EE+YM PP
Sbjct: 1548 DLIEEVYMDPPP 1559
>gb|AAM91874.1| putative copia-like polyprotein [Oryza sativa Japonica Group]
Length = 894
Score = 40.0 bits (92), Expect(3) = 2e-08
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +2
Query: 5 ERYKG*LVAKVYTQFYRVDYREIFALVAKLNMV 103
ERYK LVAK Y+Q Y +DY E FA VAK++ V
Sbjct: 443 ERYKARLVAKGYSQTYGIDYDETFAPVAKMSTV 475
Score = 37.4 bits (85), Expect(3) = 2e-08
Identities = 19/28 (67%), Positives = 19/28 (67%)
Frame = +3
Query: 123 AANFGWNLQQFDVKNAFLHRSSGGDLYE 206
AANF W L Q DVKNAFLH GDL E
Sbjct: 482 AANFDWPLHQLDVKNAFLH----GDLQE 505
Score = 25.8 bits (55), Expect(3) = 2e-08
Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
Frame = +1
Query: 181 DLAEEIYMKVPP*GF--SLHEGK 243
DL EE+YM++PP GF S EGK
Sbjct: 502 DLQEEVYMEIPP-GFATSQTEGK 523
>emb|CAN79977.1| hypothetical protein VITISV_029183 [Vitis vinifera]
Length = 1572
Score = 44.3 bits (103), Expect(2) = 2e-08
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = +2
Query: 5 ERYKG*LVAKVYTQFYRVDYREIFALVAKLNMVGV 109
ER+K LVAK YTQ Y +DY E FA VAK+N V V
Sbjct: 586 ERFKARLVAKGYTQTYGIDYTETFAFVAKINTVRV 620
Score = 39.7 bits (91), Expect(2) = 2e-08
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = +3
Query: 120 LAANFGWNLQQFDVKNAFLHRSSGGDLYEGSP 215
LAAN W LQQFDVKN FLH ++Y P
Sbjct: 624 LAANLDWPLQQFDVKNVFLHGELSEEVYMDLP 655