BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00055411
         (324 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC17823.1| E3 ubiquitin-protein ligase RING1-like protein [M...    62   8e-08
emb|CAN65273.1| hypothetical protein VITISV_024536 [Vitis vinifera]    62   8e-08
ref|XP_007040245.1| Uncharacterized protein TCM_016258 [Theobrom...    60   4e-07
ref|XP_004150446.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    59   7e-07
gb|EXB93461.1| E3 ubiquitin-protein ligase CIP8 [Morus notabilis]      57   2e-06
ref|XP_004166886.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    57   3e-06
ref|XP_007009904.1| Uncharacterized protein TCM_043211 [Theobrom...    57   4e-06
ref|XP_007046170.1| Zinc finger-like protein [Theobroma cacao] g...    56   5e-06
gb|EXC17829.1| E3 ubiquitin-protein ligase RING1-like protein [M...    56   6e-06
ref|XP_007046158.1| Zinc finger-like protein [Theobroma cacao] g...    55   8e-06

>gb|EXC17823.1| E3 ubiquitin-protein ligase RING1-like protein [Morus notabilis]
          Length = 228

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
 Frame = -3

Query: 235 VYNEEDTMQSVMLESVEDYIEKQNWLVPASKAAIEGLEK-------GNFXXXXXXXXDCR 77
           V+  +  +  VML S+ED         PA+++A+E LEK        +F         C 
Sbjct: 119 VFQTQGDLVVVMLRSIEDAGVAVFRSNPAARSAVEALEKLKYDGICSDFGDGDQSRLICP 178

Query: 76  VCLEEMEIGFEVTRMPCSHLFHGSC 2
           +C+EE+ IG  VTRMPCSH+FHG C
Sbjct: 179 ICMEEVIIGSHVTRMPCSHMFHGDC 203


>emb|CAN65273.1| hypothetical protein VITISV_024536 [Vitis vinifera]
          Length = 265

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
 Frame = -3

Query: 226 EEDTMQSVMLESVEDYIEKQ-NWLVPASKAAIEGLEKGNFXXXXXXXXDCRVCLEEMEIG 50
           E +TM  V+  S+ED ++   + +VPA+KA+IE LEK            C +CLE++ + 
Sbjct: 170 ENETMDEVVSYSLEDGMDVDVDMVVPATKASIEALEK---LEGLNSMGKCMICLEQLSLE 226

Query: 49  FEVTRMPCSHLFHGSC 2
            EV++MPCSH++HG C
Sbjct: 227 DEVSKMPCSHVYHGDC 242


>ref|XP_007040245.1| Uncharacterized protein TCM_016258 [Theobroma cacao]
           gi|508777490|gb|EOY24746.1| Uncharacterized protein
           TCM_016258 [Theobroma cacao]
          Length = 223

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/74 (39%), Positives = 41/74 (55%)
 Frame = -3

Query: 223 EDTMQSVMLESVEDYIEKQNWLVPASKAAIEGLEKGNFXXXXXXXXDCRVCLEEMEIGFE 44
           ED+  ++  +  E  ++  + + PASK AIEGLEK            C VCLEEM    E
Sbjct: 63  EDSNSTLDNDIDELLVDVDSRIRPASKTAIEGLEKVKIREGLGDERFCSVCLEEMSTEME 122

Query: 43  VTRMPCSHLFHGSC 2
             R+PCSH++H +C
Sbjct: 123 ARRLPCSHIYHAAC 136


>ref|XP_004150446.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 226

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
 Frame = -3

Query: 244 VVYVYNEEDTMQSVMLESVEDYIEKQNWLVPASKAAIEGLEKGNFXXXXXXXXD-CRVCL 68
           VV  YNE   +  V+ ES     +     +PAS+ AIEGL+K             CR+CL
Sbjct: 128 VVSPYNERQEIGRVLRESSPQAFKT----LPASEMAIEGLKKVEIDVGGELLIGECRICL 183

Query: 67  EEMEIGFEVTRMPCSHLFHGSC 2
           +E+  G EVTR+PC+HL+H  C
Sbjct: 184 DELMNGMEVTRLPCAHLYHRDC 205


>gb|EXB93461.1| E3 ubiquitin-protein ligase CIP8 [Morus notabilis]
          Length = 225

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/94 (35%), Positives = 47/94 (50%)
 Frame = -3

Query: 283 CKKMGVKIEVWDTVVYVYNEEDTMQSVMLESVEDYIEKQNWLVPASKAAIEGLEKGNFXX 104
           C+ M  K E    V++V    D      ++ +    E   +L  ASK +IE LEK     
Sbjct: 117 CRGMASKREPHQRVLHV----DVYIDAFVDELPKPSENDRFLRAASKESIEDLEKLRIEV 172

Query: 103 XXXXXXDCRVCLEEMEIGFEVTRMPCSHLFHGSC 2
                  C VCL+++ +G E TR+PCSHL+HG C
Sbjct: 173 PEKSVT-CSVCLDDVPVGSEATRLPCSHLYHGDC 205


>ref|XP_004166886.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 226

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
 Frame = -3

Query: 244 VVYVYNEEDTMQSVMLESVEDYIEKQNWLVPASKAAIEGLEKGNFXXXXXXXXD-CRVCL 68
           VV  YNE   +  V+ ES     +     +PAS+ AIEGL+              CR+CL
Sbjct: 128 VVSPYNERQEIGRVLRESSPQAFKT----LPASEMAIEGLKNVEIDVGGELLIGECRICL 183

Query: 67  EEMEIGFEVTRMPCSHLFHGSC 2
           +E+  G EVTR+PC+HL+H  C
Sbjct: 184 DELMNGMEVTRLPCAHLYHRDC 205


>ref|XP_007009904.1| Uncharacterized protein TCM_043211 [Theobroma cacao]
           gi|508726817|gb|EOY18714.1| Uncharacterized protein
           TCM_043211 [Theobroma cacao]
          Length = 331

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 27/53 (50%), Positives = 33/53 (62%)
 Frame = -3

Query: 160 LVPASKAAIEGLEKGNFXXXXXXXXDCRVCLEEMEIGFEVTRMPCSHLFHGSC 2
           LVPA+  +++ LEK            C VCLEEM  G +VT+MPCSHLFHG C
Sbjct: 262 LVPAAATSVQALEK----VTCHSEEKCSVCLEEMLTGSQVTKMPCSHLFHGDC 310


>ref|XP_007046170.1| Zinc finger-like protein [Theobroma cacao]
           gi|508710105|gb|EOY02002.1| Zinc finger-like protein
           [Theobroma cacao]
          Length = 257

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 18/103 (17%)
 Frame = -3

Query: 256 VWDTVVYVYNEE----DTMQSVMLESVEDYIEKQNWLVPASKAAIEGLEKG--------- 116
           +W T+V   NEE    D ++  + ES  ++      +VPA +++I+ + K          
Sbjct: 134 LWVTIVQHVNEEEEEEDLIERALEESASEFESSNYNMVPAKESSIKNMLKSVRVEAVECD 193

Query: 115 -----NFXXXXXXXXDCRVCLEEMEIGFEVTRMPCSHLFHGSC 2
                          +C +CLEE+++G + +RMPCSH FHG C
Sbjct: 194 QKGEERIMERLLETENCVICLEELKVGSDASRMPCSHTFHGDC 236


>gb|EXC17829.1| E3 ubiquitin-protein ligase RING1-like protein [Morus notabilis]
          Length = 289

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
 Frame = -3

Query: 154 PASKAAIEGLEKGNFXXXXXXXXD--CRVCLEEMEIGFEVTRMPCSHLFHGSC 2
           PA+K+A++ L KG F           C +C+EE++IG  +TRMPCSH+FH  C
Sbjct: 216 PAAKSAVDELGKGMFTGSYDPASKMMCSICMEEVKIGSHITRMPCSHMFHSDC 268


>ref|XP_007046158.1| Zinc finger-like protein [Theobroma cacao]
           gi|508710093|gb|EOY01990.1| Zinc finger-like protein
           [Theobroma cacao]
          Length = 257

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 18/113 (15%)
 Frame = -3

Query: 286 GCKKMGVKIEVWDTVVYVYNEEDTMQSVMLESVEDY---IEKQNW-LVPASKAAIEGLEK 119
           G + + ++  +W T V   NEE+  + +M  ++E+     E  N+ +VPA +++++ + K
Sbjct: 124 GRQVLPLQAVLWGTFVEHVNEEEEEEVLMERALEESASEFESSNYNMVPAKESSVKKMLK 183

Query: 118 G--------------NFXXXXXXXXDCRVCLEEMEIGFEVTRMPCSHLFHGSC 2
                                    +C +CLEE+++G + +RMPCSH+FHG C
Sbjct: 184 SVRVEAVECDQKVEEKIKKGRLEAENCVICLEELKVGSDASRMPCSHIFHGDC 236