BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00055319
         (288 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006445527.1| hypothetical protein CICLE_v10004111mg [Citr...    75   9e-12
ref|NP_671841.1| uncharacterized protein [Arabidopsis thaliana] ...    59   4e-11
gb|AFK44984.1| unknown [Medicago truncatula]                           52   1e-07
ref|XP_003618685.1| Photosystem I assembly protein ycf3 [Medicag...    57   2e-06

>ref|XP_006445527.1| hypothetical protein CICLE_v10004111mg [Citrus clementina]
           gi|557547807|gb|ESR58767.1| hypothetical protein
           CICLE_v10004111mg [Citrus clementina]
          Length = 58

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 38/53 (71%), Positives = 38/53 (71%)
 Frame = +2

Query: 80  NHYT*ESTPRKLCYIRNCPFPLIGIGTNKNGWDNKHPSRSYFGYSYNHRRLLK 238
           N  T ES  RKLCY    P  L GIGT KNGWDNKHPSRSY GY YNHRRLLK
Sbjct: 8   NPTTPESATRKLCY--KLPPFLSGIGTKKNGWDNKHPSRSYCGYPYNHRRLLK 58


>ref|NP_671841.1| uncharacterized protein [Arabidopsis thaliana]
           gi|330251116|gb|AEC06210.1| uncharacterized protein
           AT2G12905 [Arabidopsis thaliana]
          Length = 72

 Score = 59.3 bits (142), Expect(2) = 4e-11
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = +2

Query: 137 FPLIGIGTNKNGWDNKHPSRSYFGYSYNH 223
           F  +GIGTN+NGW+NKHPSRSYFGY YNH
Sbjct: 44  FFFVGIGTNQNGWNNKHPSRSYFGYPYNH 72



 Score = 33.9 bits (76), Expect(2) = 4e-11
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +3

Query: 57  TNGQQKGRITTPRNQHHENFV 119
           TN + +GR TTPRNQ H+NF+
Sbjct: 16  TNRRHRGRSTTPRNQQHKNFL 36


>gb|AFK44984.1| unknown [Medicago truncatula]
          Length = 63

 Score = 52.4 bits (124), Expect(2) = 1e-07
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = -3

Query: 223 MVIRVSKVRTRWMFVVPTILVSPDPDKGKGAI 128
           MVI VSK+RTRWMF+VPTILVSPDP K KG I
Sbjct: 1   MVIWVSKIRTRWMFIVPTILVSPDPHK-KGRI 31



 Score = 28.9 bits (63), Expect(2) = 1e-07
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = -2

Query: 107 VVLIPRCSDSSLLLSIGTSGVGL 39
           V+LIP+ S SS +  IGTSGVGL
Sbjct: 40  VLLIPKRSASSPMPPIGTSGVGL 62


>ref|XP_003618685.1| Photosystem I assembly protein ycf3 [Medicago truncatula]
           gi|358344504|ref|XP_003636329.1| Photosystem I assembly
           protein ycf3 [Medicago truncatula]
           gi|358349399|ref|XP_003638725.1| Photosystem I assembly
           protein ycf3 [Medicago truncatula]
           gi|355493700|gb|AES74903.1| Photosystem I assembly
           protein ycf3 [Medicago truncatula]
           gi|355502264|gb|AES83467.1| Photosystem I assembly
           protein ycf3 [Medicago truncatula]
           gi|355504660|gb|AES85863.1| Photosystem I assembly
           protein ycf3 [Medicago truncatula]
          Length = 66

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 23/24 (95%), Positives = 23/24 (95%)
 Frame = +2

Query: 167 NGWDNKHPSRSYFGYSYNHRRLLK 238
           NGWDNKHPSRSYFGY YNHRRLLK
Sbjct: 43  NGWDNKHPSRSYFGYPYNHRRLLK 66