BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00055245
         (309 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002446463.1| hypothetical protein SORBIDRAFT_06g016400 [S...    75   9e-12
ref|XP_002459348.1| hypothetical protein SORBIDRAFT_02g003013 [S...    75   9e-12
ref|XP_002439629.1| hypothetical protein SORBIDRAFT_09g017230 [S...    75   1e-11
ref|NP_001043325.1| Os01g0556600 [Oryza sativa Japonica Group] g...    74   2e-11
ref|XP_002467194.1| hypothetical protein SORBIDRAFT_01g021220 [S...    74   3e-11
ref|XP_002450204.1| hypothetical protein SORBIDRAFT_05g001940 [S...    72   8e-11
ref|NP_001046804.2| Os02g0463700 [Oryza sativa Japonica Group] g...    72   1e-10
ref|XP_002440837.1| hypothetical protein SORBIDRAFT_09g008040 [S...    71   1e-10
ref|XP_002453868.1| hypothetical protein SORBIDRAFT_04g020125 [S...    71   2e-10
ref|XP_002449443.1| hypothetical protein SORBIDRAFT_05g011880 [S...    70   2e-10
ref|XP_002445504.1| hypothetical protein SORBIDRAFT_07g020600 [S...    70   3e-10
ref|XP_006348793.1| PREDICTED: uncharacterized protein LOC102601...    69   5e-10
ref|XP_004301981.1| PREDICTED: DNA repair and recombination prot...    69   5e-10
ref|XP_002448970.1| hypothetical protein SORBIDRAFT_05g002670 [S...    69   5e-10
ref|XP_002444604.1| hypothetical protein SORBIDRAFT_07g024540 [S...    69   7e-10
ref|XP_002450741.1| hypothetical protein SORBIDRAFT_05g016770 [S...    69   9e-10
emb|CAD40616.1| OSJNBb0066J23.21 [Oryza sativa Japonica Group] g...    68   1e-09
gb|AFW58020.1| hypothetical protein ZEAMMB73_640003, partial [Ze...    68   1e-09
ref|XP_002453364.1| hypothetical protein SORBIDRAFT_04g004660 [S...    68   1e-09
gb|EEC77085.1| hypothetical protein OsI_15489 [Oryza sativa Indi...    68   1e-09

>ref|XP_002446463.1| hypothetical protein SORBIDRAFT_06g016400 [Sorghum bicolor]
           gi|241937646|gb|EES10791.1| hypothetical protein
           SORBIDRAFT_06g016400 [Sorghum bicolor]
          Length = 998

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 43/104 (41%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
 Frame = +2

Query: 2   RNINDYNLVE--NILSFEDDTNIREIREELXXXXXXXXXXXXXQLNENQRYAYDVIFEKV 175
           ++I +Y+L E  + + F +D  +RE++EEL              LN  Q+  +D I   V
Sbjct: 492 KDIRNYDLPELNDAVQFSNDM-MREVKEELSIQVDQEHLDIYKSLNNEQQAGFDEIVHHV 550

Query: 176 TKNEPALVFIDGPGGTGKTFL*KTILAAVRSKKLITLAIASSGV 307
             N+  + F+DGPGGTGKTFL K ILA VRS+ LI +A A+SG+
Sbjct: 551 LNNKSRVFFVDGPGGTGKTFLYKAILARVRSEGLIGIATATSGI 594


>ref|XP_002459348.1| hypothetical protein SORBIDRAFT_02g003013 [Sorghum bicolor]
           gi|241922725|gb|EER95869.1| hypothetical protein
           SORBIDRAFT_02g003013 [Sorghum bicolor]
          Length = 919

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
 Frame = +2

Query: 2   RNINDYNLVENILSFEDDTNIREIREELXXXXXXXXXXXXX---QLNENQRYAYDVIFEK 172
           + IN+YNL    +  E DTN R I+EE+                QLN++Q+ A+  I E 
Sbjct: 568 QQINNYNLPRRSIYHEFDTNNRLIQEEMNYDVQYLEKEANKLYTQLNKSQKEAFHQIVES 627

Query: 173 VTKNEPALVFIDGPGGTGKTFL*KTILAAVRSKKLITLAIASSGV 307
           V  N+    FI G GGTGKTFL  TI++ +R++K I LA+ASSGV
Sbjct: 628 VLNNKSRFYFISGHGGTGKTFLWNTIVSYLRAQKKIVLAVASSGV 672


>ref|XP_002439629.1| hypothetical protein SORBIDRAFT_09g017230 [Sorghum bicolor]
           gi|241944914|gb|EES18059.1| hypothetical protein
           SORBIDRAFT_09g017230 [Sorghum bicolor]
          Length = 512

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 41/91 (45%), Positives = 55/91 (60%)
 Frame = +2

Query: 35  ILSFEDDTNIREIREELXXXXXXXXXXXXXQLNENQRYAYDVIFEKVTKNEPALVFIDGP 214
           I+ F +D  +RE+REEL              LN+ Q+  +D I   V  N+  + F+DGP
Sbjct: 19  IVQFSNDM-MREVREELSIQVDQEHLDIYKSLNKEQQAGFDEIIHHVLNNKSQVFFVDGP 77

Query: 215 GGTGKTFL*KTILAAVRSKKLITLAIASSGV 307
           GGTGKTFL K ILA VRS+ LI +A A+SG+
Sbjct: 78  GGTGKTFLYKAILARVRSEGLIGIATATSGI 108


>ref|NP_001043325.1| Os01g0556600 [Oryza sativa Japonica Group]
            gi|113532856|dbj|BAF05239.1| Os01g0556600 [Oryza sativa
            Japonica Group]
          Length = 1932

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
 Frame = +2

Query: 5    NINDYNLVENILSFEDDTNIREIREELXXXXXXXXXXXXX---QLNENQRYAYDVIFEKV 175
            +I+DY+L +  +  +D T  R + EEL                +LN +QR  ++ I ++V
Sbjct: 888  SIDDYDLPQPAIYSDDITGNRMVDEELALDVAALTAEANLNIPRLNTDQRNVFNTIMQRV 947

Query: 176  TKNEPALVFIDGPGGTGKTFL*KTILAAVRSKKLITLAIASSGV 307
             +N P L F+ G GGTGKTFL  T+++ +RS+K I LA+ASSGV
Sbjct: 948  NENRPGLFFVYGHGGTGKTFLWNTLISKIRSEKKIVLAVASSGV 991


>ref|XP_002467194.1| hypothetical protein SORBIDRAFT_01g021220 [Sorghum bicolor]
            gi|241921048|gb|EER94192.1| hypothetical protein
            SORBIDRAFT_01g021220 [Sorghum bicolor]
          Length = 1439

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 44/105 (41%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
 Frame = +2

Query: 2    RNINDYNLVENILSFEDDTNI---REIREELXXXXXXXXXXXXXQLNENQRYAYDVIFEK 172
            +NI DY L    +     T+I   +E+REE               LN+ QR  +D I + 
Sbjct: 1175 KNIRDYGLPP--ICEMGPTSIDMMKEVREEQNVYVDQEHLDIFNSLNKEQRQGFDEIIQH 1232

Query: 173  VTKNEPALVFIDGPGGTGKTFL*KTILAAVRSKKLITLAIASSGV 307
            V  N+  + F+DGPGGTGKTFL K +LA VRSK LI +A A+SG+
Sbjct: 1233 VFANKSQVFFVDGPGGTGKTFLYKALLARVRSKGLIAIATATSGI 1277


>ref|XP_002450204.1| hypothetical protein SORBIDRAFT_05g001940 [Sorghum bicolor]
           gi|241936047|gb|EES09192.1| hypothetical protein
           SORBIDRAFT_05g001940 [Sorghum bicolor]
          Length = 526

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 42/105 (40%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
 Frame = +2

Query: 2   RNINDYNLVENILSFEDDTN---IREIREELXXXXXXXXXXXXXQLNENQRYAYDVIFEK 172
           ++I  ++L E  L+  DD N   ++E+REEL              LN+ QR  +D I   
Sbjct: 21  KDIRSFDLPE--LNDTDDFNNDIMKEVREELAVPVDQEHLDIYTSLNKEQRQGFDKILNC 78

Query: 173 VTKNEPALVFIDGPGGTGKTFL*KTILAAVRSKKLITLAIASSGV 307
           V   +  + F+DGPGGTGKTFL K +L  VRS+ LI +A A+SG+
Sbjct: 79  VLNKKSQVFFVDGPGGTGKTFLYKALLGRVRSEGLIAIATATSGI 123


>ref|NP_001046804.2| Os02g0463700 [Oryza sativa Japonica Group]
            gi|255670879|dbj|BAF08718.2| Os02g0463700 [Oryza sativa
            Japonica Group]
          Length = 1221

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 47/104 (45%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
 Frame = +2

Query: 2    RNINDYNLVENILSFEDDTN--IREIREELXXXXXXXXXXXXXQLNENQRYAYDVIFEKV 175
            ++I  + L E I    D TN   REI EE               LN  QR AYD I   V
Sbjct: 1009 KDIRSFPLPE-IDELHDTTNGVPREIIEESTIKVDPEDVNLCNSLNTEQRAAYDEILAAV 1067

Query: 176  TKNEPALVFIDGPGGTGKTFL*KTILAAVRSKKLITLAIASSGV 307
              NE A+ F+DGPGGTGKTFL K +LA VR +  I +A A+SGV
Sbjct: 1068 DHNEGAVFFVDGPGGTGKTFLYKALLATVRKQGKIAIATATSGV 1111


>ref|XP_002440837.1| hypothetical protein SORBIDRAFT_09g008040 [Sorghum bicolor]
            gi|241946122|gb|EES19267.1| hypothetical protein
            SORBIDRAFT_09g008040 [Sorghum bicolor]
          Length = 1679

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 43/104 (41%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
 Frame = +2

Query: 2    RNINDYNL--VENILSFEDDTNIREIREELXXXXXXXXXXXXXQLNENQRYAYDVIFEKV 175
            +NI DY L  +  I     D  ++E+REE               LN+ QR  +D I + V
Sbjct: 1174 KNIRDYGLPPICEIGPTSIDM-MKEVREEQNVYVEQEHLDIFNSLNKEQRQGFDEIIQHV 1232

Query: 176  TKNEPALVFIDGPGGTGKTFL*KTILAAVRSKKLITLAIASSGV 307
               +  + F+DGPGGTGKTFL K +LA VRSK LI +A A+SG+
Sbjct: 1233 FDKKSQVFFVDGPGGTGKTFLYKALLARVRSKGLIAIATATSGI 1276


>ref|XP_002453868.1| hypothetical protein SORBIDRAFT_04g020125 [Sorghum bicolor]
            gi|241933699|gb|EES06844.1| hypothetical protein
            SORBIDRAFT_04g020125 [Sorghum bicolor]
          Length = 1822

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 43/104 (41%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
 Frame = +2

Query: 5    NINDYNLVENILSFEDDTNIREIREELXXXXXXXXXXXXX---QLNENQRYAYDVIFEKV 175
            NINDYNL   +  ++   + R I EEL                QLN  QR+ +D I  +V
Sbjct: 912  NINDYNLPRLMTHYDSMYDNRLINEELDHEPLMLSMHASSLVSQLNIEQRHVFDTITSRV 971

Query: 176  TKNEPALVFIDGPGGTGKTFL*KTILAAVRSKKLITLAIASSGV 307
                    F+ G GGTGKTFL   I+A++RS+K I LA+ASSGV
Sbjct: 972  LSGSHGFFFVCGHGGTGKTFLWNAIIASLRSEKKIVLAVASSGV 1015


>ref|XP_002449443.1| hypothetical protein SORBIDRAFT_05g011880 [Sorghum bicolor]
           gi|241935286|gb|EES08431.1| hypothetical protein
           SORBIDRAFT_05g011880 [Sorghum bicolor]
          Length = 708

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 41/105 (39%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
 Frame = +2

Query: 2   RNINDYNLVENILSFEDDTNI---REIREELXXXXXXXXXXXXXQLNENQRYAYDVIFEK 172
           ++I DY L    +S E  +++   RE+ +E               LN+ QR  +D I + 
Sbjct: 203 KDIRDYGLPP--ISDEGPSSVDMMREVTDEQNIPIDQDHLDIFDSLNKEQREGFDEIIQH 260

Query: 173 VTKNEPALVFIDGPGGTGKTFL*KTILAAVRSKKLITLAIASSGV 307
           V  N+  + F+DGPGGTGKTFL K +LA VRS+ LI +A A+SG+
Sbjct: 261 VFANKSQVFFVDGPGGTGKTFLYKALLARVRSRGLIAIATATSGI 305


>ref|XP_002445504.1| hypothetical protein SORBIDRAFT_07g020600 [Sorghum bicolor]
           gi|241941854|gb|EES14999.1| hypothetical protein
           SORBIDRAFT_07g020600 [Sorghum bicolor]
          Length = 1028

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 42/103 (40%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
 Frame = +2

Query: 2   RNINDYNLVENILSFEDDTNI-REIREELXXXXXXXXXXXXXQLNENQRYAYDVIFEKVT 178
           ++I  Y L++   +++   +I REI EE               LN  QR AYD I   V 
Sbjct: 512 KDIKSYPLLDIDDTYDASHDIPREIFEEASIEANKDDVALLDTLNVEQRAAYDEIMSSVD 571

Query: 179 KNEPALVFIDGPGGTGKTFL*KTILAAVRSKKLITLAIASSGV 307
                L F+DGPGGTGKT+L K +LA +RS+K I +A A+SGV
Sbjct: 572 TKHGGLFFVDGPGGTGKTYLYKALLATIRSQKKIVVATATSGV 614


>ref|XP_006348793.1| PREDICTED: uncharacterized protein LOC102601726 [Solanum tuberosum]
          Length = 1028

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 40/102 (39%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
 Frame = +2

Query: 5    NINDYNLV-ENILSFEDDTNIREIREELXXXXXXXXXXXXXQLNENQRYAYDVIFEKVTK 181
            +IN+Y L+ ++I S        ++  E              +LN+ Q  AY+VI E++  
Sbjct: 697  DINEYELIPQSINSSAAAREANDVHFERSITVSEDDVLLHKKLNKKQMIAYNVITERIFS 756

Query: 182  NEPALVFIDGPGGTGKTFL*KTILAAVRSKKLITLAIASSGV 307
            N+    FIDGPGGTGKTFL + +LA +RS   I LA A+SGV
Sbjct: 757  NKVGAFFIDGPGGTGKTFLYRALLATIRSMGYIALATATSGV 798


>ref|XP_004301981.1| PREDICTED: DNA repair and recombination protein pif1,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 294

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
 Frame = +2

Query: 2   RNINDYNLVENILSFEDDTNIRE-IREELXXXXXXXXXXXXXQLNENQRYAYDVIFEKVT 178
           ++I D++L E     ED   +   I +E              +LN +Q  A++ I + V 
Sbjct: 33  KSIRDFDLPEMTAEQEDGLRVPSCIEDEHSINVPQEDIDAIGRLNNDQMMAFNTILDAVV 92

Query: 179 KNEPALVFIDGPGGTGKTFL*KTILAAVRSKKLITLAIASSGV 307
           + E AL F+DGPGGTGKT+L + +LA +RS   I LA ASSG+
Sbjct: 93  RRESALFFVDGPGGTGKTYLYRALLAKLRSMNHIVLATASSGI 135


>ref|XP_002448970.1| hypothetical protein SORBIDRAFT_05g002670 [Sorghum bicolor]
            gi|241934813|gb|EES07958.1| hypothetical protein
            SORBIDRAFT_05g002670 [Sorghum bicolor]
          Length = 1193

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 39/81 (48%), Positives = 45/81 (55%)
 Frame = +2

Query: 65   REIREELXXXXXXXXXXXXXQLNENQRYAYDVIFEKVTKNEPALVFIDGPGGTGKTFL*K 244
            REI EE               LN  QR AYD I   V      L F+DGPGGTGKT+L K
Sbjct: 802  REIFEEASIEANEDDVALSNTLNVEQRAAYDEIMSTVDTKHGGLFFVDGPGGTGKTYLYK 861

Query: 245  TILAAVRSKKLITLAIASSGV 307
             +LA +RS+K I +A ASSGV
Sbjct: 862  ALLATIRSQKKIAVATASSGV 882


>ref|XP_002444604.1| hypothetical protein SORBIDRAFT_07g024540 [Sorghum bicolor]
           gi|241940954|gb|EES14099.1| hypothetical protein
           SORBIDRAFT_07g024540 [Sorghum bicolor]
          Length = 1185

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 42/103 (40%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
 Frame = +2

Query: 2   RNINDYNLVENILSFEDDTNI-REIREELXXXXXXXXXXXXXQLNENQRYAYDVIFEKVT 178
           ++I  Y L +   +++   +I REI EE               LN  QR AYD I   V 
Sbjct: 669 KDIKSYPLPDIDDTYDASHDIPREIFEEASIEANKDDVALLDTLNVEQRAAYDEIMSSVD 728

Query: 179 KNEPALVFIDGPGGTGKTFL*KTILAAVRSKKLITLAIASSGV 307
                L F+DGPGGTGKT+L K +LA +RS+K I +A A+SGV
Sbjct: 729 TKHGGLFFVDGPGGTGKTYLYKALLATIRSQKKIAVATATSGV 771


>ref|XP_002450741.1| hypothetical protein SORBIDRAFT_05g016770 [Sorghum bicolor]
           gi|241936584|gb|EES09729.1| hypothetical protein
           SORBIDRAFT_05g016770 [Sorghum bicolor]
          Length = 938

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 33/60 (55%), Positives = 42/60 (70%)
 Frame = +2

Query: 128 LNENQRYAYDVIFEKVTKNEPALVFIDGPGGTGKTFL*KTILAAVRSKKLITLAIASSGV 307
           LNE QR AYD I   V   +  L F+DGPGGTGKT+L + +LA +RS+K I +A A+SGV
Sbjct: 482 LNEEQRAAYDEIMSSVDTEDGGLFFVDGPGGTGKTYLYRALLATIRSQKKIAVATATSGV 541


>emb|CAD40616.1| OSJNBb0066J23.21 [Oryza sativa Japonica Group]
            gi|38346440|emb|CAE04434.2| OSJNBa0018J19.1 [Oryza sativa
            Japonica Group] gi|116309570|emb|CAH66630.1|
            OSIGBa0105P02.4 [Oryza sativa Indica Group]
          Length = 1746

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 39/81 (48%), Positives = 45/81 (55%)
 Frame = +2

Query: 65   REIREELXXXXXXXXXXXXXQLNENQRYAYDVIFEKVTKNEPALVFIDGPGGTGKTFL*K 244
            +EI EE               LN  QR AYD I   V  NE  L FIDGPGGTGKTFL +
Sbjct: 1359 KEIIEESMIKVDPEDTALCNSLNTEQRAAYDEILATVDHNEGGLFFIDGPGGTGKTFLYR 1418

Query: 245  TILAAVRSKKLITLAIASSGV 307
             +LA VR +  I +A A+SGV
Sbjct: 1419 ALLATVREQGKIAIATATSGV 1439


>gb|AFW58020.1| hypothetical protein ZEAMMB73_640003, partial [Zea mays]
          Length = 627

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 42/103 (40%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
 Frame = +2

Query: 2   RNINDYNLVENILSFEDDTNI-REIREELXXXXXXXXXXXXXQLNENQRYAYDVIFEKVT 178
           ++I  + L   I  ++D     REI EE               LNE QR AYD I   V 
Sbjct: 201 KDIKTFPLPAIIDKYDDSHGTDREIYEEESIEPTAEDVAMKETLNEEQRSAYDKILSFVD 260

Query: 179 KNEPALVFIDGPGGTGKTFL*KTILAAVRSKKLITLAIASSGV 307
            N   + F+DGPGGTGKT+L K +LAA+RS+  I +A  +SGV
Sbjct: 261 TNNGGVFFVDGPGGTGKTYLYKALLAALRSQDKIAVATTTSGV 303


>ref|XP_002453364.1| hypothetical protein SORBIDRAFT_04g004660 [Sorghum bicolor]
           gi|241933195|gb|EES06340.1| hypothetical protein
           SORBIDRAFT_04g004660 [Sorghum bicolor]
          Length = 1145

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
 Frame = +2

Query: 2   RNINDYNLVENILSFEDDTNI-REIREELXXXXXXXXXXXXXQLNENQRYAYDVIFEKVT 178
           ++I  Y L +   +++   NI REI EE               LNE Q+ AY+ I   + 
Sbjct: 634 KDIKMYPLPDIDDTYDPSGNIPREIFEEASVEASIDDMALSKTLNEEQQAAYNEIMSAID 693

Query: 179 KNEPALVFIDGPGGTGKTFL*KTILAAVRSKKLITLAIASSGV 307
            N   L F+DGPGGTGKT+L + +LA +RS+  I +A A+SGV
Sbjct: 694 SNHRGLFFVDGPGGTGKTYLYRALLATIRSQNKIVVATATSGV 736


>gb|EEC77085.1| hypothetical protein OsI_15489 [Oryza sativa Indica Group]
          Length = 1412

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 39/81 (48%), Positives = 45/81 (55%)
 Frame = +2

Query: 65   REIREELXXXXXXXXXXXXXQLNENQRYAYDVIFEKVTKNEPALVFIDGPGGTGKTFL*K 244
            +EI EE               LN  QR AYD I   V  NE  L FIDGPGGTGKTFL +
Sbjct: 1025 KEIIEESMIKVDPEDTALCNSLNTEQRAAYDEILATVDHNEGGLFFIDGPGGTGKTFLYR 1084

Query: 245  TILAAVRSKKLITLAIASSGV 307
             +LA VR +  I +A A+SGV
Sbjct: 1085 ALLATVREQGKIAIATATSGV 1105