BLASTX nr result

ID: Cocculus23_contig00054939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00054939
         (392 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]    53   5e-07

>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
          Length = 1461

 Score = 52.8 bits (125), Expect(2) = 5e-07
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
 Frame = +2

Query: 44  INLISVGKLIHDISYQLAFFTGSCLTRYQS*KKTIGVSKLHGSLYLLLSPTISPKSLPAR 223
           +NL+SV KL   +   + FF   C+ +  + +KTIG+ K H  LY L     +    PA 
Sbjct: 474 VNLLSVSKLTRALQCIVMFFFDFCVVQDATTRKTIGLGKQHNGLYYL-----AQDQNPAL 528

Query: 224 ASSIF---NLWHQCLGHPSHSNLYLHSK 298
           A +I    +LWHQ LGHPS   L + +K
Sbjct: 529 AYAIHKHSDLWHQRLGHPSSGPLQVLAK 556



 Score = 26.6 bits (57), Expect(2) = 5e-07
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +3

Query: 294 PNLNFHGQHDLCQTCPLVKQTWVVFSLSN*SS 389
           P + F  +H +C  CPL KQT + F  S  SS
Sbjct: 559 PKIYFDSKH-VCDICPLAKQTRLSFPSSFISS 589


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