BLASTX nr result
ID: Cocculus23_contig00054939
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cocculus23_contig00054939 (392 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera] 53 5e-07 >emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera] Length = 1461 Score = 52.8 bits (125), Expect(2) = 5e-07 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 3/88 (3%) Frame = +2 Query: 44 INLISVGKLIHDISYQLAFFTGSCLTRYQS*KKTIGVSKLHGSLYLLLSPTISPKSLPAR 223 +NL+SV KL + + FF C+ + + +KTIG+ K H LY L + PA Sbjct: 474 VNLLSVSKLTRALQCIVMFFFDFCVVQDATTRKTIGLGKQHNGLYYL-----AQDQNPAL 528 Query: 224 ASSIF---NLWHQCLGHPSHSNLYLHSK 298 A +I +LWHQ LGHPS L + +K Sbjct: 529 AYAIHKHSDLWHQRLGHPSSGPLQVLAK 556 Score = 26.6 bits (57), Expect(2) = 5e-07 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +3 Query: 294 PNLNFHGQHDLCQTCPLVKQTWVVFSLSN*SS 389 P + F +H +C CPL KQT + F S SS Sbjct: 559 PKIYFDSKH-VCDICPLAKQTRLSFPSSFISS 589