BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00054842
         (337 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006476151.1| PREDICTED: DNA polymerase theta-like isoform...    92   6e-17
ref|XP_006450613.1| hypothetical protein CICLE_v100072282mg, par...    92   6e-17
ref|XP_002324822.2| hypothetical protein POPTR_0018s00860g [Popu...    89   6e-16
ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...    85   9e-15
emb|CBI20904.3| unnamed protein product [Vitis vinifera]               85   9e-15
ref|XP_007012034.1| Helicases,ATP-dependent helicases,nucleic ac...    82   8e-14
ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus comm...    82   8e-14
ref|XP_004138885.1| PREDICTED: DNA polymerase theta-like [Cucumi...    81   2e-13
ref|XP_006356662.1| PREDICTED: DNA polymerase theta-like [Solanu...    74   3e-11
ref|XP_007226676.1| hypothetical protein PRUPE_ppa020963mg [Prun...    70   3e-10
ref|XP_006282845.1| hypothetical protein CARUB_v10006788mg [Caps...    69   5e-10
ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp....    69   7e-10
ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycin...    67   3e-09
ref|XP_003588560.1| DNA polymerase I family protein expressed [M...    66   4e-09
ref|NP_001078482.1| MUS308 and mammalian DNA polymerase-like pro...    66   6e-09
emb|CAA18592.1| putative protein [Arabidopsis thaliana] gi|72701...    66   6e-09
ref|XP_004498542.1| PREDICTED: DNA polymerase theta-like [Cicer ...    64   2e-08
gb|EYU20465.1| hypothetical protein MIMGU_mgv1a026281mg, partial...    64   3e-08
ref|XP_004292864.1| PREDICTED: DNA polymerase theta-like [Fragar...    64   3e-08
ref|XP_006837921.1| hypothetical protein AMTR_s00218p00019950 [A...    63   5e-08

>ref|XP_006476151.1| PREDICTED: DNA polymerase theta-like isoform X1 [Citrus sinensis]
           gi|568844552|ref|XP_006476152.1| PREDICTED: DNA
           polymerase theta-like isoform X2 [Citrus sinensis]
          Length = 2191

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 47/80 (58%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
 Frame = +1

Query: 25  MASDSPRTRIDQFYAARKKKTSSPSLKSEKVDKGSRTVFGGSPSAKGTLDNYLVNSHGDS 204
           MAS SPRTRIDQFYA++K+K+ SPS+KS + +K ++     SPSAKGTLDNYL NS  D 
Sbjct: 1   MASGSPRTRIDQFYASKKRKSRSPSVKSGRAEKDAKITVEVSPSAKGTLDNYLKNSQDDG 60

Query: 205 H-RESGLLSRQDQIKRNLAL 261
           H  +  LLSR + +KRNL+L
Sbjct: 61  HTSKQSLLSRHEVVKRNLSL 80


>ref|XP_006450613.1| hypothetical protein CICLE_v100072282mg, partial [Citrus
           clementina] gi|557553839|gb|ESR63853.1| hypothetical
           protein CICLE_v100072282mg, partial [Citrus clementina]
          Length = 1810

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 47/80 (58%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
 Frame = +1

Query: 25  MASDSPRTRIDQFYAARKKKTSSPSLKSEKVDKGSRTVFGGSPSAKGTLDNYLVNSHGDS 204
           MAS SPRTRIDQFYA++K+K+ SPS+KS + +K ++     SPSAKGTLDNYL NS  D 
Sbjct: 1   MASGSPRTRIDQFYASKKRKSRSPSVKSGRAEKDAKITVEVSPSAKGTLDNYLKNSQDDG 60

Query: 205 H-RESGLLSRQDQIKRNLAL 261
           H  +  LLSR + +KRNL+L
Sbjct: 61  HTSKQSLLSRHEVVKRNLSL 80


>ref|XP_002324822.2| hypothetical protein POPTR_0018s00860g [Populus trichocarpa]
           gi|550317750|gb|EEF03387.2| hypothetical protein
           POPTR_0018s00860g [Populus trichocarpa]
          Length = 2173

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 50/78 (64%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
 Frame = +1

Query: 31  SDSPRTRIDQFYAARKKKTSSPSLKSEKVDKGSRT-VFGGSPSAKGTLDNYLVNSHGDSH 207
           SDSPRTRIDQF+A+RK+K+SSP+LKS +++K +R+ V  GSPSAKGTLDNYLVNS  D +
Sbjct: 2   SDSPRTRIDQFFASRKRKSSSPNLKSGRIEKDARSKVVEGSPSAKGTLDNYLVNSK-DDN 60

Query: 208 RESGLLSRQDQIKRNLAL 261
           R  GLL     +KR+LAL
Sbjct: 61  RGRGLL-----VKRSLAL 73


>ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Vitis
           vinifera]
          Length = 2181

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 43/92 (46%), Positives = 59/92 (64%)
 Frame = +1

Query: 25  MASDSPRTRIDQFYAARKKKTSSPSLKSEKVDKGSRTVFGGSPSAKGTLDNYLVNSHGDS 204
           MASDS R RIDQF++++K+K  SP LK+ +++K S+    GSPS+KGTLDNYLV    D+
Sbjct: 1   MASDSIRNRIDQFFSSKKRKPLSPGLKTGRIEKDSKRAVDGSPSSKGTLDNYLVTYPDDN 60

Query: 205 HRESGLLSRQDQIKRNLALXXXXXXXXDNENA 300
               G  + +  +KRNL L        +NENA
Sbjct: 61  STARGSSAGKGPVKRNLTLEINLPSKDENENA 92


>emb|CBI20904.3| unnamed protein product [Vitis vinifera]
          Length = 2091

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 43/92 (46%), Positives = 59/92 (64%)
 Frame = +1

Query: 25  MASDSPRTRIDQFYAARKKKTSSPSLKSEKVDKGSRTVFGGSPSAKGTLDNYLVNSHGDS 204
           MASDS R RIDQF++++K+K  SP LK+ +++K S+    GSPS+KGTLDNYLV    D+
Sbjct: 1   MASDSIRNRIDQFFSSKKRKPLSPGLKTGRIEKDSKRAVDGSPSSKGTLDNYLVTYPDDN 60

Query: 205 HRESGLLSRQDQIKRNLALXXXXXXXXDNENA 300
               G  + +  +KRNL L        +NENA
Sbjct: 61  STARGSSAGKGPVKRNLTLEINLPSKDENENA 92


>ref|XP_007012034.1| Helicases,ATP-dependent helicases,nucleic acid binding,ATP
           binding,DNA-directed DNA polymerases,DNA binding
           [Theobroma cacao] gi|508782397|gb|EOY29653.1|
           Helicases,ATP-dependent helicases,nucleic acid
           binding,ATP binding,DNA-directed DNA polymerases,DNA
           binding [Theobroma cacao]
          Length = 2146

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 44/98 (44%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
 Frame = +1

Query: 25  MASDSPRTRIDQFYAARKKKTSSPSLKSEKVDKGSRTVFGGSPSAKGTLDNYL-VNSHGD 201
           MAS SPR RIDQF+A++K+KT SP LK+ + +K ++T   GSPSAKGTLDNYL  +   +
Sbjct: 1   MASGSPRARIDQFFASKKRKTQSPCLKTGRFEKNAKTTVEGSPSAKGTLDNYLRTSQENE 60

Query: 202 SHRESGLLSRQDQIKRNLALXXXXXXXXDNENAQELSQ 315
             + S  +  QD +KR+LA         +NE +  L++
Sbjct: 61  IVQPSCTILGQDPVKRSLASEIDKSSENENEQSFLLAE 98


>ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus communis]
           gi|223544402|gb|EEF45923.1| DNA polymerase theta,
           putative [Ricinus communis]
          Length = 2154

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 47/79 (59%), Positives = 58/79 (73%)
 Frame = +1

Query: 25  MASDSPRTRIDQFYAARKKKTSSPSLKSEKVDKGSRTVFGGSPSAKGTLDNYLVNSHGDS 204
           M SDS R RI+QF+A++K+K  SP LK   ++K +     GSP+AKGTLDNYLVNS  D 
Sbjct: 1   MESDSSRIRINQFFASKKRKALSPGLKYG-IEKEATITSDGSPNAKGTLDNYLVNSQ-DQ 58

Query: 205 HRESGLLSRQDQIKRNLAL 261
           +R  GLLSRQD +KRNLAL
Sbjct: 59  NR--GLLSRQDSVKRNLAL 75


>ref|XP_004138885.1| PREDICTED: DNA polymerase theta-like [Cucumis sativus]
          Length = 2144

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 47/85 (55%), Positives = 55/85 (64%), Gaps = 6/85 (7%)
 Frame = +1

Query: 25  MASDSPRTRIDQFYAARKKKTSSPSLKSEKVDKGSRTVFGGSPSAKGTLDNYLVNS--HG 198
           MAS SP +RIDQFYA++K+K  +PSLKS   DK  +    GSP AKGTLDNYLV S  HG
Sbjct: 1   MASGSPPSRIDQFYASKKRKPLTPSLKSGSYDKNGKKALEGSPGAKGTLDNYLVISQDHG 60

Query: 199 D----SHRESGLLSRQDQIKRNLAL 261
                SH     LS Q+ +KRNL L
Sbjct: 61  SSDNPSHSVRENLSAQNLVKRNLLL 85


>ref|XP_006356662.1| PREDICTED: DNA polymerase theta-like [Solanum tuberosum]
          Length = 2144

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
 Frame = +1

Query: 25  MASDSPRTRIDQFYAARKKKTS-SPSLKSEKVDKGSRTVFGGSPSAKGTLDNYLVNSHGD 201
           MASD+PR RIDQF+A++KK+ S SPSLK  +  K  +T   GSPS KG+L+ YLV S  D
Sbjct: 1   MASDTPRARIDQFFASKKKRKSLSPSLKPTRAKKDVKTTQEGSPSMKGSLNGYLVTSQDD 60

Query: 202 SHRESGLLSRQDQIKRNLALXXXXXXXXDNE 294
           S  +   ++R   +KRNL L        +N+
Sbjct: 61  S--KPSHIARGTPVKRNLTLEIGPYLKDENK 89


>ref|XP_007226676.1| hypothetical protein PRUPE_ppa020963mg [Prunus persica]
           gi|462423612|gb|EMJ27875.1| hypothetical protein
           PRUPE_ppa020963mg [Prunus persica]
          Length = 2169

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 37/78 (47%), Positives = 54/78 (69%), Gaps = 6/78 (7%)
 Frame = +1

Query: 40  PRTRIDQFYAARKKKTSSPSLKSEKVDKGSRTVFGGSPSAKGTLDNYLVNSHGD------ 201
           PR+RI+QF+A++K+K  SP LKS + +K  +    GSPSAKGTLDNYL+ S  +      
Sbjct: 5   PRSRINQFFASKKRKPLSPVLKSGRNEKDVKVKVEGSPSAKGTLDNYLLASQENNIISEP 64

Query: 202 SHRESGLLSRQDQIKRNL 255
           S++    L++QDQ++RNL
Sbjct: 65  SYKVCDSLAQQDQVRRNL 82


>ref|XP_006282845.1| hypothetical protein CARUB_v10006788mg [Capsella rubella]
           gi|482551550|gb|EOA15743.1| hypothetical protein
           CARUB_v10006788mg [Capsella rubella]
          Length = 2162

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
 Frame = +1

Query: 25  MASDSPRTRIDQFYAARKKKTSSPSLKSEKVDKGSRTVFGGSPSAKGTLDNYLVNSHGD- 201
           M SDS ++RIDQFY ++K+K SSP+LKS + +K  +     SP  KGTLDNYL  S  D 
Sbjct: 1   MDSDSSKSRIDQFYVSKKRKHSSPNLKSGRNEKNVKVTGERSPGDKGTLDNYLKASLDDK 60

Query: 202 SHRESGLLSRQDQIKRNLAL 261
           S   SGL +RQ+   R L L
Sbjct: 61  STTNSGLQARQEAFTRKLDL 80


>ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315090|gb|EFH45513.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 2147

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 41/92 (44%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
 Frame = +1

Query: 25  MASDSPRTRIDQFYAARKKKTSSPSLKSEKVDKGSRTVFGGSPSAKGTLDNYLVNSHGD- 201
           M SDS ++RIDQFY ++K+K  SP+LKS + +K  +     SP  KGTLDNYL  S  D 
Sbjct: 1   MDSDSSKSRIDQFYVSKKRKHQSPNLKSGRNEKNVKVTGERSPGDKGTLDNYLKASLDDK 60

Query: 202 SHRESGLLSRQDQIKRNLALXXXXXXXXDNEN 297
           S   SGL +RQ+   R L L        +N N
Sbjct: 61  STTNSGLQARQEAFTRKLDLEVSASSVGENIN 92


>ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycine max]
          Length = 2147

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 4/106 (3%)
 Frame = +1

Query: 25  MASDSPRTRIDQFYAARKKKTSSPSLKSEKVDKGSRTVFGGSPSAKGTLDNYLVNSH--- 195
           MAS S R+RIDQFYA++K+K +SP  K+ + +KG+R     SPSAKGTL+ YLV+S    
Sbjct: 1   MASPSHRSRIDQFYASKKRKAASPVPKAGRFEKGARHGADESPSAKGTLEGYLVSSQDGG 60

Query: 196 GDSHRESGLLSRQDQIKRNLALXXXXXXXXD-NENAQELSQGIESS 330
           GD   ++  +    ++KRNL          + N++   L QG   S
Sbjct: 61  GDGCGDANTV----KVKRNLTSEIGGSLDNELNKHTVSLGQGCGDS 102


>ref|XP_003588560.1| DNA polymerase I family protein expressed [Medicago truncatula]
           gi|355477608|gb|AES58811.1| DNA polymerase I family
           protein expressed [Medicago truncatula]
          Length = 2269

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 35/79 (44%), Positives = 50/79 (63%)
 Frame = +1

Query: 25  MASDSPRTRIDQFYAARKKKTSSPSLKSEKVDKGSRTVFGGSPSAKGTLDNYLVNSHGDS 204
           M+S SPR R++QFY  +K+K  SP+ K+ +++K +R V  GSPSAKG+L+ YLV S  D 
Sbjct: 1   MSSPSPRNRLNQFYTTKKRKAISPAPKAGRIEKVARIVADGSPSAKGSLEGYLVPSQEDP 60

Query: 205 HRESGLLSRQDQIKRNLAL 261
                   R D ++R L L
Sbjct: 61  -------VRPDLVRRKLGL 72


>ref|NP_001078482.1| MUS308 and mammalian DNA polymerase-like protein [Arabidopsis
           thaliana] gi|62241195|dbj|BAD93700.1| helicase and
           polymerase containing protein TEBICHI [Arabidopsis
           thaliana] gi|332660705|gb|AEE86105.1| MUS308 and
           mammalian DNA polymerase-like protein [Arabidopsis
           thaliana]
          Length = 2154

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
 Frame = +1

Query: 25  MASDSPRTRIDQFYAARKKKTSSPSLKSEKVDKGSRTVFGGSPSAKGTLDNYLVNSHGD- 201
           M SDS ++RIDQFY ++K+K  SP+LKS + +K  +     SP  KGTLD+YL  S  D 
Sbjct: 1   MDSDSSKSRIDQFYVSKKRKHQSPNLKSGRNEKNVKVTGERSPGDKGTLDSYLKASLDDK 60

Query: 202 SHRESGLLSRQDQIKRNLAL 261
           S   SGL +RQ+   R L L
Sbjct: 61  STTNSGLQARQEAFTRKLDL 80


>emb|CAA18592.1| putative protein [Arabidopsis thaliana] gi|7270173|emb|CAB79986.1|
           putative protein [Arabidopsis thaliana]
          Length = 671

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
 Frame = +1

Query: 25  MASDSPRTRIDQFYAARKKKTSSPSLKSEKVDKGSRTVFGGSPSAKGTLDNYLVNSHGD- 201
           M SDS ++RIDQFY ++K+K  SP+LKS + +K  +     SP  KGTLD+YL  S  D 
Sbjct: 149 MDSDSSKSRIDQFYVSKKRKHQSPNLKSGRNEKNVKVTGERSPGDKGTLDSYLKASLDDK 208

Query: 202 SHRESGLLSRQDQIKRNLAL 261
           S   SGL +RQ+   R L L
Sbjct: 209 STTNSGLQARQEAFTRKLDL 228


>ref|XP_004498542.1| PREDICTED: DNA polymerase theta-like [Cicer arietinum]
          Length = 2141

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
 Frame = +1

Query: 40  PRTRIDQFYAARKKKTSSPSLKSEKVDKGSR-TVFGGSPSAKGTLDNYLVNSHGDSHRES 216
           PR R+ QFYA +K+K  SP   S++++KG+R  V  GSPSAKG+L+ YLV S GD     
Sbjct: 4   PRNRLHQFYATKKRKAVSPV--SKRIEKGARLVVLDGSPSAKGSLETYLVPSQGDES--- 58

Query: 217 GLLSRQDQIKRNLA 258
               R D ++RNLA
Sbjct: 59  ---VRPDSVRRNLA 69


>gb|EYU20465.1| hypothetical protein MIMGU_mgv1a026281mg, partial [Mimulus
           guttatus]
          Length = 2115

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 32/57 (56%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
 Frame = +1

Query: 25  MASDSPRTRIDQFYAARKK-KTSSPSLKSEKVDKGSRTVFGGSPSAKGTLDNYLVNS 192
           MASD+PR RIDQF++++KK K  SP+ KS + +K ++  F GSPSAKG+L+NYL  S
Sbjct: 1   MASDTPRARIDQFFSSKKKRKILSPASKSGRREKEAKNQFEGSPSAKGSLENYLETS 57


>ref|XP_004292864.1| PREDICTED: DNA polymerase theta-like [Fragaria vesca subsp. vesca]
          Length = 2164

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 42/86 (48%), Positives = 58/86 (67%), Gaps = 8/86 (9%)
 Frame = +1

Query: 25  MASDSPR-TRIDQFYAARKKKTSSPSLKSEKVDKGSRTVFGGSPSAKGTLDNYLVNSHGD 201
           MAS SP  +RI+QF+A++K+K  SP+LKS + +K ++ V   SPSAK TLD+YL  S  D
Sbjct: 1   MASGSPPPSRINQFFASKKRKPVSPALKSGRNEKDAKAV-ETSPSAKATLDSYLRTS-PD 58

Query: 202 SH-------RESGLLSRQDQIKRNLA 258
           SH       +    L+RQDQ++RNLA
Sbjct: 59  SHNVAKASCKIGDSLARQDQVRRNLA 84


>ref|XP_006837921.1| hypothetical protein AMTR_s00218p00019950 [Amborella trichopoda]
           gi|548840332|gb|ERN00490.1| hypothetical protein
           AMTR_s00218p00019950 [Amborella trichopoda]
          Length = 1171

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 32/58 (55%), Positives = 40/58 (68%)
 Frame = +1

Query: 25  MASDSPRTRIDQFYAARKKKTSSPSLKSEKVDKGSRTVFGGSPSAKGTLDNYLVNSHG 198
           M+S SPRTRIDQF+ +RK+K  SP LK EK DK  +    GSPS K +L+   V+SHG
Sbjct: 1   MSSGSPRTRIDQFFPSRKRKPPSPCLKEEKNDKHIKNKADGSPSTKCSLEFDFVDSHG 58