BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00054826
         (568 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB72467.1| putative protein [Arabidopsis thaliana]               124   2e-26
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...   124   2e-26
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   121   1e-25
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...   121   1e-25
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   120   3e-25
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               119   4e-25
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...   119   4e-25
dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]           119   6e-25
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                117   2e-24
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   114   2e-23
dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ...   113   3e-23
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   113   4e-23
gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub...   112   7e-23
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...   112   7e-23
gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thali...   111   2e-22
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   110   2e-22
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...   110   3e-22
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   109   4e-22
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           109   4e-22
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   108   1e-21

>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score =  124 bits (311), Expect = 2e-26
 Identities = 67/186 (36%), Positives = 107/186 (57%), Gaps = 2/186 (1%)
 Frame = +1

Query: 13  PLVDLMEARLQLWKSRPLSWVGRVVLVKSVLQSLYIYWVGAFAIPAAIFKKLEAIMRRFL 192
           PL++ +  R+  W SR LS+ GR  L+ S++ S   +W+ AF +P A  +++E +   FL
Sbjct: 341 PLIEQIRKRIGSWSSRFLSFAGRFNLISSIIWSSCNFWLSAFQLPRACIQEIEKLCSSFL 400

Query: 193 ISGSS-QKKFSLVSWNDISRPKQEAGLNVRTPKDMNKAGILKLIGKLVSNKDSL*VKWIH 369
            SG++   K + +SWN + +PK E GL +R+ K+ N    LKL+ +++S+ DSL VKW+ 
Sbjct: 401 WSGTNLNSKKAKISWNQVCKPKSEGGLGLRSLKEANDVCCLKLVWRIISHGDSLWVKWVE 460

Query: 370 EKYMKYKSISTVHIPSNC-SWTWRRVLKLCSIAKEGK*CILHVLGKGDDTYFWMDLWHQA 546
              +K +    V   +N  SW W+++LK   +AK  + C   V G G+ T FW D W   
Sbjct: 461 HNLLKREIFWIVKENANLGSWIWKKILKYRGVAK--RFCKAEV-GNGESTSFWFDDWSLL 517

Query: 547 GVLNDI 564
           G L D+
Sbjct: 518 GRLIDV 523


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
            subsp. vesca]
          Length = 958

 Score =  124 bits (310), Expect = 2e-26
 Identities = 63/186 (33%), Positives = 104/186 (55%), Gaps = 1/186 (0%)
 Frame = +1

Query: 1    QRCLPLVDLMEARLQLWKSRPLSWVGRVVLVKSVLQSLYIYWVGAFAIPAAIFKKLEAIM 180
            Q C PL+D +E R++ W+++ LS+ GR+ L++SVL S+ +YW     +P  + K +E  +
Sbjct: 606  QDCSPLLDRIETRIKSWENKVLSFAGRLQLIQSVLSSIQVYWASHLILPKKVLKDIEKRL 665

Query: 181  RRFLISGS-SQKKFSLVSWNDISRPKQEAGLNVRTPKDMNKAGILKLIGKLVSNKDSL*V 357
            R FL +G+ S +  + V+W++I  PK E GL ++     NKA ++  I  LVS+  +   
Sbjct: 666  RCFLWAGNCSGRAATKVAWSEICLPKCEGGLGIKDLHCWNKALMISHIWNLVSSSSNFWT 725

Query: 358  KWIHEKYMKYKSISTVHIPSNCSWTWRRVLKLCSIAKEGK*CILHVLGKGDDTYFWMDLW 537
             W+    +K  S     +PS CSW WR++LK+  +        ++++G G  T  W D W
Sbjct: 726  DWVKVYLLKGNSFWNAPLPSICSWNWRKLLKIRELCCS---FFVNIIGDGRATSLWFDNW 782

Query: 538  HQAGVL 555
            H  G L
Sbjct: 783  HPLGPL 788


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score =  121 bits (304), Expect = 1e-25
 Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 2/183 (1%)
 Frame = +1

Query: 13   PLVDLMEARLQLWKSRPLSWVGRVVLVKSVLQSLYIYWVGAFAIPAAIFKKLEAIMRRFL 192
            PL+D +  R+ +W SR LS+ GR+ L+ SVL S+  +W+ AF +P     ++  I    L
Sbjct: 509  PLIDQIRRRIGMWTSRYLSFAGRLSLINSVLWSITNFWMNAFRLPRECINEINRISSALL 568

Query: 193  ISGSS-QKKFSLVSWNDISRPKQEAGLNVRTPKDMNKAGILKLIGKLVSNKDSL*VKWIH 369
             SG     K + VSW++I +PK+E GL +++ ++ NK   LKLI +L+S +DSL VKW  
Sbjct: 569  WSGPELNPKKAKVSWDEICKPKKEGGLGLQSLREANKVSSLKLIWRLLSCQDSLWVKWTR 628

Query: 370  EKYMKYKSISTVHIPSNC-SWTWRRVLKLCSIAKEGK*CILHVLGKGDDTYFWMDLWHQA 546
               +K +S  ++   S   SW WRR+LK   +AK    C + V   G +T FW D W + 
Sbjct: 629  MNLLKKESFWSIGTHSTLGSWIWRRLLKHREVAKSF--CKIEV-NNGVNTSFWFDNWSEK 685

Query: 547  GVL 555
            G L
Sbjct: 686  GPL 688


>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score =  121 bits (303), Expect = 1e-25
 Identities = 67/187 (35%), Positives = 106/187 (56%), Gaps = 2/187 (1%)
 Frame = +1

Query: 10  LPLVDLMEARLQLWKSRPLSWVGRVVLVKSVLQSLYIYWVGAFAIPAAIFKKLEAIMRRF 189
           LPL++ ++ ++  W +R LS+ GR+ L+ SVL S+  +W+GAF +P    ++++ +   +
Sbjct: 169 LPLIEHIKKKIGSWSARFLSYAGRLNLISSVLWSICNFWMGAFRLPRECIREIDKMCSAY 228

Query: 190 LISGSS-QKKFSLVSWNDISRPKQEAGLNVRTPKDMNKAGILKLIGKLVSNKDSL*VKWI 366
           L SG       + ++W D+ +PK E GL +R+ K+ N    LKLI +++S+ DSL VKWI
Sbjct: 229 LWSGGDLNTSKAKIAWTDVCKPKDEGGLGLRSLKEANDVSCLKLIWRIISHADSLWVKWI 288

Query: 367 HEKYMKYKSISTVHIPSNC-SWTWRRVLKLCSIAKEGK*CILHVLGKGDDTYFWMDLWHQ 543
           H   +K  S   V   ++  SW W++VLK    A +   C   V   G  T+FW D W  
Sbjct: 289 HATLLKQVSFWAVRENTSLGSWMWKKVLKFRDAAIQ--LCKAEV-NNGAHTFFWYDNWSD 345

Query: 544 AGVLNDI 564
            G L DI
Sbjct: 346 MGRLIDI 352


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  120 bits (300), Expect = 3e-25
 Identities = 67/185 (36%), Positives = 103/185 (55%), Gaps = 2/185 (1%)
 Frame = +1

Query: 7    CLPLVDLMEARLQLWKSRPLSWVGRVVLVKSVLQSLYIYWVGAFAIPAAIFKKLEAIMRR 186
            CLPL++ +  R+  W SR LS+ GR+ L+ SVL S+  +W+ AF +P    ++LE +   
Sbjct: 786  CLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAFRLPRKCIRELEKMCSA 845

Query: 187  FLISGSS-QKKFSLVSWNDISRPKQEAGLNVRTPKDMNKAGILKLIGKLVSNKDSL*VKW 363
            FL SG+      + +SW+ + +PK E GL +R+ K+ N    LKL+ K+VS+ +SL VKW
Sbjct: 846  FLWSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKW 905

Query: 364  IHEKYMKYKSISTV-HIPSNCSWTWRRVLKLCSIAKEGK*CILHVLGKGDDTYFWMDLWH 540
            + +  ++  S   V    S  SW W+++LK   +AK         +G G  T FW D W 
Sbjct: 906  VDQHLLRNASFWEVKQTVSQGSWIWKKLLKYREVAKT---LSKVEVGNGKQTSFWYDNWS 962

Query: 541  QAGVL 555
              G L
Sbjct: 963  DLGQL 967


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  119 bits (299), Expect = 4e-25
 Identities = 65/187 (34%), Positives = 102/187 (54%), Gaps = 2/187 (1%)
 Frame = +1

Query: 13  PLVDLMEARLQLWKSRPLSWVGRVVLVKSVLQSLYIYWVGAFAIPAAIFKKLEAIMRRFL 192
           PL++ ++ R+  W  R  S+ GR  L+KSVL S+  +W+ AF +P    ++++ +   FL
Sbjct: 435 PLLEQIKKRIATWTFRFFSFAGRFNLIKSVLWSICNFWLAAFRLPRQCIREIDKLCSSFL 494

Query: 193 ISGSSQKKFSL-VSWNDISRPKQEAGLNVRTPKDMNKAGILKLIGKLVSNKDSL*VKWIH 369
            SGS        +SW+ + +PK E GL +R  K+ N    LKL+ +++SN +SL  KW+ 
Sbjct: 495 WSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTKWVA 554

Query: 370 EKYMKYKSI-STVHIPSNCSWTWRRVLKLCSIAKEGK*CILHVLGKGDDTYFWMDLWHQA 546
           E  ++ KSI S     S  SW WR++LK+  +AK         +G G+   FW D W   
Sbjct: 555 EYLIRKKSIWSLKQSTSMGSWIWRKILKIRDVAKSFS---RVEVGNGESASFWYDHWSAH 611

Query: 547 GVLNDII 567
           G L D +
Sbjct: 612 GRLIDTV 618


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score =  119 bits (299), Expect = 4e-25
 Identities = 70/186 (37%), Positives = 104/186 (55%), Gaps = 2/186 (1%)
 Frame = +1

Query: 13  PLVDLMEARLQLWKSRPLSWVGRVVLVKSVLQSLYIYWVGAFAIPAAIFKKLEAIMRRFL 192
           PL + +  R+  W SR LS+ GR+ L+ SVL S   +W+ AF +P+A  K++ +I   FL
Sbjct: 193 PLFEQIRNRIGTWTSRYLSFAGRLNLISSVLWSTMNFWMSAFRLPSACLKEINSICSAFL 252

Query: 193 ISGSS-QKKFSLVSWNDISRPKQEAGLNVRTPKDMNKAGILKLIGKLVSNKDSL*VKWIH 369
            SG    ++ + VSW+DI +PKQE GL +R+  + N   +LKLI ++ SN DSL VKW  
Sbjct: 253 WSGPELHRRKAKVSWDDICKPKQEGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSK 312

Query: 370 EKYMKYKSISTVHIPSNC-SWTWRRVLKLCSIAKEGK*CILHVLGKGDDTYFWMDLWHQA 546
              +K +S  ++   S+  SW W+++LK    AK         +  G  T FW D W   
Sbjct: 313 MNLLKQESFWSLTPNSSLGSWMWKKMLKYRETAKPFS---RVEVNNGARTSFWFDNWSGM 369

Query: 547 GVLNDI 564
           G L D+
Sbjct: 370 GHLMDV 375


>dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]
          Length = 478

 Score =  119 bits (298), Expect = 6e-25
 Identities = 65/186 (34%), Positives = 110/186 (59%), Gaps = 2/186 (1%)
 Frame = +1

Query: 13  PLVDLMEARLQLWKSRPLSWVGRVVLVKSVLQSLYIYWVGAFAIPAAIFKKLEAIMRRFL 192
           PLV+ +  R+  W +R LS+ GR+ L+ SV+ SL  +W+ AF +P+A  K++++I   FL
Sbjct: 44  PLVEKIRVRIGKWTARHLSFAGRLQLISSVIHSLTNFWMSAFRLPSACIKEIDSICSSFL 103

Query: 193 ISGSS-QKKFSLVSWNDISRPKQEAGLNVRTPKDMNKAGILKLIGKLVSNKDSL*VKWIH 369
            SG     K + V+W+D+  PK E GL +R+ K+ NK  +LKLI +++S+  SL V+W+ 
Sbjct: 104 WSGPELNTKKAKVAWSDVCTPKDEGGLGIRSLKEANKVSLLKLIWRMLSS-TSLWVQWLR 162

Query: 370 EKYMKYKSISTVHIPSNC-SWTWRRVLKLCSIAKEGK*CILHVLGKGDDTYFWMDLWHQA 546
              ++  S  ++   +   SW W+++LK  ++A      + H +  G +T FW D W + 
Sbjct: 163 LYLLRKGSFWSISGNTTLGSWMWKKILKHRALASG---FVKHDIHNGSNTSFWFDNWSKI 219

Query: 547 GVLNDI 564
           G L D+
Sbjct: 220 GRLIDV 225


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  117 bits (293), Expect = 2e-24
 Identities = 64/186 (34%), Positives = 105/186 (56%), Gaps = 2/186 (1%)
 Frame = +1

Query: 13  PLVDLMEARLQLWKSRPLSWVGRVVLVKSVLQSLYIYWVGAFAIPAAIFKKLEAIMRRFL 192
           PL+D + +++  W +R LS+ GR+ L+ SV+ SL  +W+ A+ +PA   K++E +   FL
Sbjct: 361 PLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFL 420

Query: 193 ISGSS-QKKFSLVSWNDISRPKQEAGLNVRTPKDMNKAGILKLIGKLVSNKDSL*VKWIH 369
            SG     K + ++W  + + KQE GL +++  + NK   LKLI +LVS + SL V W+ 
Sbjct: 421 WSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVW 480

Query: 370 EKYMKYKSISTVHIPSNC-SWTWRRVLKLCSIAKEGK*CILHVLGKGDDTYFWMDLWHQA 546
              ++  S  + +  S+  SW W+++LK   +AK    C + +   G  T FW D W Q 
Sbjct: 481 TYIIRKGSFWSANDRSSLGSWMWKKLLKYRDVAKSM--CKVEI-KSGSSTSFWYDNWSQL 537

Query: 547 GVLNDI 564
           G L D+
Sbjct: 538 GQLVDV 543


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  114 bits (284), Expect = 2e-23
 Identities = 55/150 (36%), Positives = 92/150 (61%), Gaps = 1/150 (0%)
 Frame = +1

Query: 4    RCLPLVDLMEARLQLWKSRPLSWVGRVVLVKSVLQSLYIYWVGAFAIPAAIFKKLEAIMR 183
            +C PLV+++  R Q W ++ LS+ GR+ L+KS+L S+  YW   F +   + + +E + R
Sbjct: 770  QCKPLVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQNYWAHIFPLSKKVIQAVEKVCR 829

Query: 184  RFLISGSSQK-KFSLVSWNDISRPKQEAGLNVRTPKDMNKAGILKLIGKLVSNKDSL*VK 360
            +FL +G +++ K + V+W  I RPK   G NV   K  N+A +LKL+  +   +D L V+
Sbjct: 830  KFLWTGKTEETKKAPVAWATIQRPKSRGGWNVINMKYWNRAAMLKLLWAIEFKRDKLWVR 889

Query: 361  WIHEKYMKYKSISTVHIPSNCSWTWRRVLK 450
            WIH  Y+K + I TV+I +  +W  R+++K
Sbjct: 890  WIHSYYIKRQDILTVNISNQTTWILRKIVK 919


>dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1115

 Score =  113 bits (283), Expect = 3e-23
 Identities = 69/186 (37%), Positives = 103/186 (55%), Gaps = 2/186 (1%)
 Frame = +1

Query: 13   PLVDLMEARLQLWKSRPLSWVGRVVLVKSVLQSLYIYWVGAFAIPAAIFKKLEAIMRRFL 192
            PL + +  R+  W SR LS+ GR+ L+ SVL S   +W+ AF +P+A  K++ +I   FL
Sbjct: 705  PLFEQIRNRIGTWTSRYLSFAGRLNLISSVLWSTMNFWMSAFRLPSACLKEINSICSAFL 764

Query: 193  ISGSS-QKKFSLVSWNDISRPKQEAGLNVRTPKDMNKAGILKLIGKLVSNKDSL*VKWIH 369
             SG    ++ + VSW+DI +PKQ  GL +R+  + N   +LKLI ++ SN DSL VKW  
Sbjct: 765  WSGPELNRRKAKVSWDDICKPKQ-GGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSK 823

Query: 370  EKYMKYKSISTVHIPSNC-SWTWRRVLKLCSIAKEGK*CILHVLGKGDDTYFWMDLWHQA 546
               +K +S  ++   S+  SW W+++LK    AK         +  G  T FW D W   
Sbjct: 824  MNLLKQESFWSLKPNSSLGSWMWKKMLKYRETAKPFS---RVEVNNGARTSFWFDNWSGM 880

Query: 547  GVLNDI 564
            G L D+
Sbjct: 881  GHLMDV 886


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  113 bits (282), Expect = 4e-23
 Identities = 63/187 (33%), Positives = 110/187 (58%), Gaps = 4/187 (2%)
 Frame = +1

Query: 10   LPLVDLMEARLQLWKSRPLSWVGRVVLVKSVLQSLYIYWVGAFAIPAAIFKKLEAIMRRF 189
            LPLV+ + AR+  W +R LS+ GR+ L+KSVL S+  +W+  F +P A  +++E +   F
Sbjct: 934  LPLVEKIRARITSWTNRFLSFAGRLQLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAF 993

Query: 190  LISGSS-QKKFSLVSWNDISRPKQEAGLNVRTPKDMNKAGILKLIGKLVSNKDSL*VKWI 366
            L SG     K + ++W+++ + K+E GL ++  K+ N+  +LKLI +++S +DSL VKW+
Sbjct: 994  LWSGPDLNTKKAKIAWSEVCKLKEEGGLGLKPLKEANEVSLLKLIWRILSARDSLWVKWV 1053

Query: 367  HEKYMKYKSISTVHIPSNC-SWTWRRVLKLCSIAKEGK*CILH--VLGKGDDTYFWMDLW 537
            ++  ++ ++  +V   +   SW WR++LK     +  K  + H   +  G  T FW D W
Sbjct: 1054 NKHLIRKETFWSVKENTGLGSWLWRKILK-----QRDKARLFHRMEVRSGTFTSFWHDHW 1108

Query: 538  HQAGVLN 558
               G L+
Sbjct: 1109 CPLGRLH 1115


>gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score =  112 bits (280), Expect = 7e-23
 Identities = 64/184 (34%), Positives = 103/184 (55%), Gaps = 2/184 (1%)
 Frame = +1

Query: 10  LPLVDLMEARLQLWKSRPLSWVGRVVLVKSVLQSLYIYWVGAFAIPAAIFKKLEAIMRRF 189
           +PL++ +  R+  W +R LS+ GR+ L+ SV+ SL  +W+ AF +P A  K+++ +   F
Sbjct: 7   IPLIERIRERISCWTARHLSFAGRLQLISSVIHSLTNFWMSAFRLPNACIKEIDGLCSAF 66

Query: 190 LISGSS-QKKFSLVSWNDISRPKQEAGLNVRTPKDMNKAGILKLIGKLVSNKDSL*VKWI 366
           L SG    +K + VSWND+  PK+E GL +R+  + NK   LKLI +L+S+  SL V+W+
Sbjct: 67  LWSGPELNRKKAKVSWNDVCMPKEEGGLGLRSLTEANKVCCLKLIWRLLSS-SSLWVQWL 125

Query: 367 HEKYMKYKSISTVHIPSNC-SWTWRRVLKLCSIAKEGK*CILHVLGKGDDTYFWMDLWHQ 543
            +  ++  S  ++   S   SW WR++LK   +A        + +  G    FW D W  
Sbjct: 126 RQYVIRKGSFWSLRDTSTLGSWMWRKLLKYRHLASG---FTQYEIRNGKGVSFWHDNWSP 182

Query: 544 AGVL 555
            G L
Sbjct: 183 LGPL 186


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score =  112 bits (280), Expect = 7e-23
 Identities = 62/186 (33%), Positives = 103/186 (55%), Gaps = 2/186 (1%)
 Frame = +1

Query: 13   PLVDLMEARLQLWKSRPLSWVGRVVLVKSVLQSLYIYWVGAFAIPAAIFKKLEAIMRRFL 192
            PL+D + +++  W +R LS+ GR+ L+ SV+ SL  +W+ A+ +PA   K++E +   FL
Sbjct: 930  PLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFL 989

Query: 193  ISGSS-QKKFSLVSWNDISRPKQEAGLNVRTPKDMNKAGILKLIGKLVSNKDSL*VKWIH 369
             SG     K + ++W  + + KQE GL +++  + NK   LKLI +LVS + SL V W+ 
Sbjct: 990  WSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVW 1049

Query: 370  EKYMKYKSISTVHIPSNC-SWTWRRVLKLCSIAKEGK*CILHVLGKGDDTYFWMDLWHQA 546
               ++  S  + +  S+  SW W+++L    +AK    C + +   G  T FW D W Q 
Sbjct: 1050 TYIIRKGSFWSANDRSSLGSWMWKKLLNYRDVAKSM--CKVEI-KSGSSTSFWYDNWSQL 1106

Query: 547  GVLNDI 564
              L D+
Sbjct: 1107 RQLVDV 1112


>gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thaliana]
          Length = 504

 Score =  111 bits (277), Expect = 2e-22
 Identities = 62/184 (33%), Positives = 103/184 (55%), Gaps = 2/184 (1%)
 Frame = +1

Query: 10  LPLVDLMEARLQLWKSRPLSWVGRVVLVKSVLQSLYIYWVGAFAIPAAIFKKLEAIMRRF 189
           LPL+D ++ ++  W +R LS+ GR+ L+ S+L S+  +W+GAF +P    ++++ +   +
Sbjct: 117 LPLIDHIKQKICSWSARFLSYTGRLNLISSILWSICNFWMGAFRLPRDCIREIDKMCSAY 176

Query: 190 LISGSS-QKKFSLVSWNDISRPKQEAGLNVRTPKDMNKAGILKLIGKLVSNKDSL*VKWI 366
           L SG       + ++W  + +PK+E GL +R+ K+ N    LKLI +++S+ DSL VKWI
Sbjct: 177 LWSGGELNTSKAKIAWAFVCKPKEEGGLGLRSLKEANDVCCLKLIWRIISHADSLWVKWI 236

Query: 367 HEKYMKYKSISTVHIPSNC-SWTWRRVLKLCSIAKEGK*CILHVLGKGDDTYFWMDLWHQ 543
               +K      V   ++  SW WR++LK   IA+    C + +   G  T FW D W  
Sbjct: 237 QSSLLKKVFFWAVRENTSLGSWMWRKILKFRDIAR--TLCKVEI-NNGAQTSFWYDDWSD 293

Query: 544 AGVL 555
            G L
Sbjct: 294 LGRL 297


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  110 bits (276), Expect = 2e-22
 Identities = 61/188 (32%), Positives = 106/188 (56%), Gaps = 4/188 (2%)
 Frame = +1

Query: 13   PLVDLMEARLQLWKSRPLSWVGRVVLVKSVLQSLYIYWVGAFAIPAAIFKKLEAIMRRFL 192
            PL++ ++ ++  W +R LS+ GR+ L+ SV+ S+  +W+ A+ +PA   +++E +   FL
Sbjct: 1085 PLIEAVKTKISSWTARSLSYAGRLALLNSVIVSIANFWMSAYRLPAGCIREIEKLCSAFL 1144

Query: 193  ISGS-SQKKFSLVSWNDISRPKQEAGLNVRTPKDMNKAGILKLIGKLVSNKDSL*VKWIH 369
             SG     K + ++W+ I +PK+E GL +++  + NK   LKLI +L+S + SL V WI 
Sbjct: 1145 WSGPVLNPKKAKIAWSSICQPKKEGGLGIKSLAEANKVSCLKLIWRLLSTQPSLWVTWIW 1204

Query: 370  EKYMKYKSISTVHIPSNC-SWTWRRVLKLCSIAKEGK*CILH--VLGKGDDTYFWMDLWH 540
               ++  +  + +  S+  SW W+++LK   +AK      +H   +  G  T FW D W 
Sbjct: 1205 TFIIRKGTFWSANERSSLGSWMWKKLLKYRELAKS-----MHKVEVRNGSSTSFWYDHWS 1259

Query: 541  QAGVLNDI 564
              G L DI
Sbjct: 1260 HLGRLLDI 1267


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score =  110 bits (274), Expect = 3e-22
 Identities = 61/186 (32%), Positives = 100/186 (53%), Gaps = 1/186 (0%)
 Frame = +1

Query: 13  PLVDLMEARLQLWKSRPLSWVGRVVLVKSVLQSLYIYWVGAFAIPAAIFKKLEAIMRRFL 192
           PL++ ++ R+  W +R LS+ GR+ LV SVL S+  +W+ AF +P    ++++ +   FL
Sbjct: 306 PLLEQIKRRIGTWTARFLSYAGRLNLVSSVLWSICNFWLSAFRLPRECVREIDKLCSAFL 365

Query: 193 ISGSS-QKKFSLVSWNDISRPKQEAGLNVRTPKDMNKAGILKLIGKLVSNKDSL*VKWIH 369
            SG       + ++W  + RPK+E GL +++ K+ N    LKLI ++VS  DSL V+WI 
Sbjct: 366 WSGPELSTNKAKIAWETVCRPKREGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQWIR 425

Query: 370 EKYMKYKSISTVHIPSNCSWTWRRVLKLCSIAKEGK*CILHVLGKGDDTYFWMDLWHQAG 549
              +K  +  +    S  SW W+++LK    AK      +     G+   FW D W   G
Sbjct: 426 TYLLKRNTFWSFRSASQGSWMWKKLLKYRDTAKAFSKVDIR---NGETASFWYDDWSSKG 482

Query: 550 VLNDII 567
            L D++
Sbjct: 483 RLIDVL 488


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  109 bits (273), Expect = 4e-22
 Identities = 63/182 (34%), Positives = 94/182 (51%), Gaps = 1/182 (0%)
 Frame = +1

Query: 13   PLVDLMEARLQLWKSRPLSWVGRVVLVKSVLQSLYIYWVGAFAIPAAIFKKLEAIMRRFL 192
            PL++ + ARL+ W S+ LS+ GR  L+ SV+  L  +W+  F +P    KK+E++  +FL
Sbjct: 641  PLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFL 700

Query: 193  ISGS-SQKKFSLVSWNDISRPKQEAGLNVRTPKDMNKAGILKLIGKLVSNKDSL*VKWIH 369
             +GS   +K S VSW D   PK E GL  R+  + NK  +L+LI  L     SL  +W  
Sbjct: 701  WAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQR 760

Query: 370  EKYMKYKSISTVHIPSNCSWTWRRVLKLCSIAKEGK*CILHVLGKGDDTYFWMDLWHQAG 549
               + + S   V+      WTW+ +L L  +A++    I   +G G    FW D W   G
Sbjct: 761  HHRLGHASFWQVNALQTDPWTWKMLLNLRPLAEK---FIKAKVGNGGTVSFWFDCWTSLG 817

Query: 550  VL 555
             L
Sbjct: 818  PL 819


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  109 bits (273), Expect = 4e-22
 Identities = 63/182 (34%), Positives = 94/182 (51%), Gaps = 1/182 (0%)
 Frame = +1

Query: 13   PLVDLMEARLQLWKSRPLSWVGRVVLVKSVLQSLYIYWVGAFAIPAAIFKKLEAIMRRFL 192
            PL++ + ARL+ W S+ LS+ GR  L+ SV+  L  +W+  F +P    KK+E++  +FL
Sbjct: 641  PLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFL 700

Query: 193  ISGS-SQKKFSLVSWNDISRPKQEAGLNVRTPKDMNKAGILKLIGKLVSNKDSL*VKWIH 369
             +GS   +K S VSW D   PK E GL  R+  + NK  +L+LI  L     SL  +W  
Sbjct: 701  WAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQR 760

Query: 370  EKYMKYKSISTVHIPSNCSWTWRRVLKLCSIAKEGK*CILHVLGKGDDTYFWMDLWHQAG 549
               + + S   V+      WTW+ +L L  +A++    I   +G G    FW D W   G
Sbjct: 761  HHRLGHASFWQVNALQTDPWTWKMLLNLRPLAEK---FIKAKVGNGGTVSFWFDCWTSLG 817

Query: 550  VL 555
             L
Sbjct: 818  PL 819


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  108 bits (270), Expect = 1e-21
 Identities = 54/150 (36%), Positives = 87/150 (58%), Gaps = 1/150 (0%)
 Frame = +1

Query: 4    RCLPLVDLMEARLQLWKSRPLSWVGRVVLVKSVLQSLYIYWVGAFAIPAAIFKKLEAIMR 183
            +C PL+D +  R Q W +  LS+ GR+ LVK++L S+  YW   F +P  + K +E   R
Sbjct: 773  QCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIFPLPKKLIKAVETTCR 832

Query: 184  RFLISGSSQKKFSL-VSWNDISRPKQEAGLNVRTPKDMNKAGILKLIGKLVSNKDSL*VK 360
            +FL +G+    +   V+W+ + +PK   GLNV      NKA ILKL+  +   +D L V+
Sbjct: 833  KFLWTGTVDTSYKAPVAWDFLQQPKSTGGLNVTNMVLWNKAAILKLLWAITFKQDKLWVR 892

Query: 361  WIHEKYMKYKSISTVHIPSNCSWTWRRVLK 450
            W++  Y+K ++I  V + SN SW  R++ +
Sbjct: 893  WVNAYYIKRQNIENVTVSSNTSWILRKIFE 922