BLASTX nr result
ID: Cocculus23_contig00054780
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00054780
(295 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 149 3e-34
emb|CAN69998.1| hypothetical protein VITISV_006839 [Vitis vinifera] 149 5e-34
emb|CAN65867.1| hypothetical protein VITISV_034935 [Vitis vinifera] 149 5e-34
emb|CAN76321.1| hypothetical protein VITISV_044445 [Vitis vinifera] 149 5e-34
emb|CAN74702.1| hypothetical protein VITISV_023139 [Vitis vinifera] 149 5e-34
emb|CAN61435.1| hypothetical protein VITISV_033767 [Vitis vinifera] 149 5e-34
emb|CAN65235.1| hypothetical protein VITISV_040876 [Vitis vinifera] 149 5e-34
emb|CAN60796.1| hypothetical protein VITISV_015834 [Vitis vinifera] 149 5e-34
emb|CAN67337.1| hypothetical protein VITISV_004415 [Vitis vinifera] 149 5e-34
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 148 9e-34
emb|CAN71224.1| hypothetical protein VITISV_006366 [Vitis vinifera] 147 1e-33
emb|CAN81130.1| hypothetical protein VITISV_003944 [Vitis vinifera] 147 2e-33
emb|CAN74624.1| hypothetical protein VITISV_024822 [Vitis vinifera] 147 2e-33
emb|CAN69431.1| hypothetical protein VITISV_024659 [Vitis vinifera] 147 2e-33
gb|ABG22123.1| polyprotein [Prunus avium] 147 2e-33
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 146 3e-33
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 146 3e-33
emb|CAN63196.1| hypothetical protein VITISV_035792 [Vitis vinifera] 146 3e-33
emb|CAN74341.1| hypothetical protein VITISV_043997 [Vitis vinifera] 146 3e-33
gb|ABG22121.1| polyprotein [Solanum melongena] 146 3e-33
>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 149 bits (377), Expect = 3e-34
Identities = 69/97 (71%), Positives = 81/97 (83%)
Frame = -1
Query: 295 YIEKVLQRFGIQKAKPVSIPLASYLRLSAQLSPQTDDEKEFMSRVPYGSAVGSLMYAMVC 116
YIEKVLQRF ++K K VS PLA++ RLS + SP TDDE+ M R+PY SAVGSLMYAMVC
Sbjct: 1066 YIEKVLQRFNMEKTKAVSCPLANHFRLSTKQSPSTDDERRKMERIPYASAVGSLMYAMVC 1125
Query: 115 TRPDISHAVSVVSRYMENPGKTHWEAVKWILRYLSGS 5
TRPDI+HAV VVSR++ NPGK HW+AVKWILRYL G+
Sbjct: 1126 TRPDIAHAVGVVSRFLSNPGKEHWDAVKWILRYLRGT 1162
>emb|CAN69998.1| hypothetical protein VITISV_006839 [Vitis vinifera]
Length = 1211
Score = 149 bits (375), Expect = 5e-34
Identities = 67/98 (68%), Positives = 83/98 (84%)
Frame = -1
Query: 295 YIEKVLQRFGIQKAKPVSIPLASYLRLSAQLSPQTDDEKEFMSRVPYGSAVGSLMYAMVC 116
Y++KVL RF + +AKPVS PL S+ +LS + SP+T++E++ MS+VPY SA+GSLMYAMVC
Sbjct: 949 YVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYAMVC 1008
Query: 115 TRPDISHAVSVVSRYMENPGKTHWEAVKWILRYLSGSL 2
TRPDI+HAV VVSR+M PGK HWEAVKWILRYL GSL
Sbjct: 1009 TRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSL 1046
>emb|CAN65867.1| hypothetical protein VITISV_034935 [Vitis vinifera]
Length = 1137
Score = 149 bits (375), Expect = 5e-34
Identities = 67/98 (68%), Positives = 83/98 (84%)
Frame = -1
Query: 295 YIEKVLQRFGIQKAKPVSIPLASYLRLSAQLSPQTDDEKEFMSRVPYGSAVGSLMYAMVC 116
Y++KVL RF + +AKPVS PL S+ +LS + SP+T++E++ MS+VPY SA+GSLMYAMVC
Sbjct: 875 YVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYAMVC 934
Query: 115 TRPDISHAVSVVSRYMENPGKTHWEAVKWILRYLSGSL 2
TRPDI+HAV VVSR+M PGK HWEAVKWILRYL GSL
Sbjct: 935 TRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSL 972
>emb|CAN76321.1| hypothetical protein VITISV_044445 [Vitis vinifera]
Length = 1279
Score = 149 bits (375), Expect = 5e-34
Identities = 67/98 (68%), Positives = 83/98 (84%)
Frame = -1
Query: 295 YIEKVLQRFGIQKAKPVSIPLASYLRLSAQLSPQTDDEKEFMSRVPYGSAVGSLMYAMVC 116
Y++KVL RF + +AKPVS PL S+ +LS + SP+T++E++ MS+VPY SA+GSLMYAMVC
Sbjct: 1017 YVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYAMVC 1076
Query: 115 TRPDISHAVSVVSRYMENPGKTHWEAVKWILRYLSGSL 2
TRPDI+HAV VVSR+M PGK HWEAVKWILRYL GSL
Sbjct: 1077 TRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSL 1114
>emb|CAN74702.1| hypothetical protein VITISV_023139 [Vitis vinifera]
Length = 1222
Score = 149 bits (375), Expect = 5e-34
Identities = 67/98 (68%), Positives = 83/98 (84%)
Frame = -1
Query: 295 YIEKVLQRFGIQKAKPVSIPLASYLRLSAQLSPQTDDEKEFMSRVPYGSAVGSLMYAMVC 116
Y++KVL RF + +AKPVS PL S+ +LS + SP+T++E++ MS+VPY SA+GSLMYAMVC
Sbjct: 960 YVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYAMVC 1019
Query: 115 TRPDISHAVSVVSRYMENPGKTHWEAVKWILRYLSGSL 2
TRPDI+HAV VVSR+M PGK HWEAVKWILRYL GSL
Sbjct: 1020 TRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSL 1057
>emb|CAN61435.1| hypothetical protein VITISV_033767 [Vitis vinifera]
Length = 1298
Score = 149 bits (375), Expect = 5e-34
Identities = 67/98 (68%), Positives = 83/98 (84%)
Frame = -1
Query: 295 YIEKVLQRFGIQKAKPVSIPLASYLRLSAQLSPQTDDEKEFMSRVPYGSAVGSLMYAMVC 116
Y++KVL RF + +AKPVS PL S+ +LS + SP+T++E++ MS+VPY SA+GSLMYAMVC
Sbjct: 1036 YVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYAMVC 1095
Query: 115 TRPDISHAVSVVSRYMENPGKTHWEAVKWILRYLSGSL 2
TRPDI+HAV VVSR+M PGK HWEAVKWILRYL GSL
Sbjct: 1096 TRPDIAHAVGVVSRFMSRPGKXHWEAVKWILRYLKGSL 1133
>emb|CAN65235.1| hypothetical protein VITISV_040876 [Vitis vinifera]
Length = 1379
Score = 149 bits (375), Expect = 5e-34
Identities = 67/98 (68%), Positives = 83/98 (84%)
Frame = -1
Query: 295 YIEKVLQRFGIQKAKPVSIPLASYLRLSAQLSPQTDDEKEFMSRVPYGSAVGSLMYAMVC 116
Y++KVL RF + +AKPVS PL S+ +LS + SP+T++E++ MS+VPY SA+GSLMYAMVC
Sbjct: 579 YVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYAMVC 638
Query: 115 TRPDISHAVSVVSRYMENPGKTHWEAVKWILRYLSGSL 2
TRPDI+HAV VVSR+M PGK HWEAVKWILRYL GSL
Sbjct: 639 TRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSL 676
>emb|CAN60796.1| hypothetical protein VITISV_015834 [Vitis vinifera]
Length = 1186
Score = 149 bits (375), Expect = 5e-34
Identities = 67/98 (68%), Positives = 83/98 (84%)
Frame = -1
Query: 295 YIEKVLQRFGIQKAKPVSIPLASYLRLSAQLSPQTDDEKEFMSRVPYGSAVGSLMYAMVC 116
Y++KVL RF + +AKPVS PL S+ +LS + SP+T++E++ MS+VPY SA+GSLMYAMVC
Sbjct: 716 YVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYAMVC 775
Query: 115 TRPDISHAVSVVSRYMENPGKTHWEAVKWILRYLSGSL 2
TRPDI+HAV VVSR+M PGK HWEAVKWILRYL GSL
Sbjct: 776 TRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSL 813
>emb|CAN67337.1| hypothetical protein VITISV_004415 [Vitis vinifera]
Length = 281
Score = 149 bits (375), Expect = 5e-34
Identities = 67/98 (68%), Positives = 83/98 (84%)
Frame = -1
Query: 295 YIEKVLQRFGIQKAKPVSIPLASYLRLSAQLSPQTDDEKEFMSRVPYGSAVGSLMYAMVC 116
Y++KVL RF + +AKPVS PL S+ +LS + SP+T++E++ MS+VPY SA+GSLMYAMVC
Sbjct: 19 YVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYAMVC 78
Query: 115 TRPDISHAVSVVSRYMENPGKTHWEAVKWILRYLSGSL 2
TRPDI+HAV VVSR+M PGK HWEAVKWILRYL GSL
Sbjct: 79 TRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSL 116
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 148 bits (373), Expect = 9e-34
Identities = 69/97 (71%), Positives = 83/97 (85%)
Frame = -1
Query: 295 YIEKVLQRFGIQKAKPVSIPLASYLRLSAQLSPQTDDEKEFMSRVPYGSAVGSLMYAMVC 116
YIEKVL+RF + AKPVS PLA++ RLS+ L PQ+D + E+MSRVPY SAVGSLMYAMVC
Sbjct: 1277 YIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPQSDYDIEYMSRVPYSSAVGSLMYAMVC 1336
Query: 115 TRPDISHAVSVVSRYMENPGKTHWEAVKWILRYLSGS 5
+RPD+SHA+SVVSRYM NPGK HW+AV+WI RYL G+
Sbjct: 1337 SRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLRGT 1373
>emb|CAN71224.1| hypothetical protein VITISV_006366 [Vitis vinifera]
Length = 1951
Score = 147 bits (372), Expect = 1e-33
Identities = 66/98 (67%), Positives = 83/98 (84%)
Frame = -1
Query: 295 YIEKVLQRFGIQKAKPVSIPLASYLRLSAQLSPQTDDEKEFMSRVPYGSAVGSLMYAMVC 116
Y++KVL RF + +AKPVS PL S+ +LS + SP+T++E++ MS+VPY SA+GSLMYAMVC
Sbjct: 54 YVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYAMVC 113
Query: 115 TRPDISHAVSVVSRYMENPGKTHWEAVKWILRYLSGSL 2
T+PDI+HAV VVSR+M PGK HWEAVKWILRYL GSL
Sbjct: 114 TKPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSL 151
>emb|CAN81130.1| hypothetical protein VITISV_003944 [Vitis vinifera]
Length = 1236
Score = 147 bits (371), Expect = 2e-33
Identities = 66/98 (67%), Positives = 82/98 (83%)
Frame = -1
Query: 295 YIEKVLQRFGIQKAKPVSIPLASYLRLSAQLSPQTDDEKEFMSRVPYGSAVGSLMYAMVC 116
Y++KVL RF + +AKPVS PL S+ +LS + SP+T++E++ MS+VPY SA+GSLMY MVC
Sbjct: 974 YVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYTMVC 1033
Query: 115 TRPDISHAVSVVSRYMENPGKTHWEAVKWILRYLSGSL 2
TRPDI+HAV VVSR+M PGK HWEAVKWILRYL GSL
Sbjct: 1034 TRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSL 1071
>emb|CAN74624.1| hypothetical protein VITISV_024822 [Vitis vinifera]
Length = 1250
Score = 147 bits (370), Expect = 2e-33
Identities = 66/98 (67%), Positives = 82/98 (83%)
Frame = -1
Query: 295 YIEKVLQRFGIQKAKPVSIPLASYLRLSAQLSPQTDDEKEFMSRVPYGSAVGSLMYAMVC 116
Y++KVL RF + +AKPVS PL S+ +LS + SP+T++E++ MS+VPY SA+GSLMY MVC
Sbjct: 988 YVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYXMVC 1047
Query: 115 TRPDISHAVSVVSRYMENPGKTHWEAVKWILRYLSGSL 2
TRPDI+HAV VVSR+M PGK HWEAVKWILRYL GSL
Sbjct: 1048 TRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSL 1085
>emb|CAN69431.1| hypothetical protein VITISV_024659 [Vitis vinifera]
Length = 1287
Score = 147 bits (370), Expect = 2e-33
Identities = 66/98 (67%), Positives = 82/98 (83%)
Frame = -1
Query: 295 YIEKVLQRFGIQKAKPVSIPLASYLRLSAQLSPQTDDEKEFMSRVPYGSAVGSLMYAMVC 116
Y++KVL RF + +AKPV PL S+ +LS + SP+T++E++ MS+VPY SA+GSLMYAMVC
Sbjct: 1025 YVKKVLSRFNMNEAKPVXTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYAMVC 1084
Query: 115 TRPDISHAVSVVSRYMENPGKTHWEAVKWILRYLSGSL 2
TRPDI+HAV VVSR+M PGK HWEAVKWILRYL GSL
Sbjct: 1085 TRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSL 1122
>gb|ABG22123.1| polyprotein [Prunus avium]
Length = 276
Score = 147 bits (370), Expect = 2e-33
Identities = 67/99 (67%), Positives = 85/99 (85%), Gaps = 1/99 (1%)
Frame = -1
Query: 295 YIEKVLQRFGI-QKAKPVSIPLASYLRLSAQLSPQTDDEKEFMSRVPYGSAVGSLMYAMV 119
Y++KVLQRFG+ + +KPVS PLA + +LSA +SP TD+E +M+++PY SAVGSLMYAMV
Sbjct: 58 YLKKVLQRFGMNENSKPVSTPLAPHFKLSASMSPNTDEESHYMAQIPYASAVGSLMYAMV 117
Query: 118 CTRPDISHAVSVVSRYMENPGKTHWEAVKWILRYLSGSL 2
CTRPDIS AVS+VSRYM NPGK HW+AVKWILRY+ G++
Sbjct: 118 CTRPDISQAVSIVSRYMHNPGKGHWQAVKWILRYILGTV 156
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 146 bits (369), Expect = 3e-33
Identities = 68/97 (70%), Positives = 82/97 (84%)
Frame = -1
Query: 295 YIEKVLQRFGIQKAKPVSIPLASYLRLSAQLSPQTDDEKEFMSRVPYGSAVGSLMYAMVC 116
YIEKVL+RF + AKPVS PLA++ RLS+ L PQ+D + E+MSRVPY S VGSLMYAMVC
Sbjct: 876 YIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPQSDYDIEYMSRVPYSSVVGSLMYAMVC 935
Query: 115 TRPDISHAVSVVSRYMENPGKTHWEAVKWILRYLSGS 5
+RPD+SHA+SVVSRYM NPGK HW+AV+WI RYL G+
Sbjct: 936 SRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLCGT 972
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 146 bits (369), Expect = 3e-33
Identities = 68/97 (70%), Positives = 83/97 (85%)
Frame = -1
Query: 295 YIEKVLQRFGIQKAKPVSIPLASYLRLSAQLSPQTDDEKEFMSRVPYGSAVGSLMYAMVC 116
YIE+VL+RF ++ AKPVS PLA +L+LS ++ P T +EK M++VPY SAVGSLMYAMVC
Sbjct: 1065 YIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVC 1124
Query: 115 TRPDISHAVSVVSRYMENPGKTHWEAVKWILRYLSGS 5
TRPDI+HAV VVSR++ENPGK HWEAVKWILRYL G+
Sbjct: 1125 TRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGT 1161
>emb|CAN63196.1| hypothetical protein VITISV_035792 [Vitis vinifera]
Length = 1179
Score = 146 bits (369), Expect = 3e-33
Identities = 66/98 (67%), Positives = 82/98 (83%)
Frame = -1
Query: 295 YIEKVLQRFGIQKAKPVSIPLASYLRLSAQLSPQTDDEKEFMSRVPYGSAVGSLMYAMVC 116
Y++KVL RF + +AKPVS PL S+ +LS + SP+T++E++ MS+VPY SA+GSLMY MVC
Sbjct: 989 YVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYDMVC 1048
Query: 115 TRPDISHAVSVVSRYMENPGKTHWEAVKWILRYLSGSL 2
TRPDI+HAV VVSR+M PGK HWEAVKWILRYL GSL
Sbjct: 1049 TRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSL 1086
>emb|CAN74341.1| hypothetical protein VITISV_043997 [Vitis vinifera]
Length = 1269
Score = 146 bits (369), Expect = 3e-33
Identities = 67/98 (68%), Positives = 81/98 (82%)
Frame = -1
Query: 295 YIEKVLQRFGIQKAKPVSIPLASYLRLSAQLSPQTDDEKEFMSRVPYGSAVGSLMYAMVC 116
Y++KVL RF + +AKPVS PL S+ +LS + SP+T+ E + MS+VPY SA+GSLMYAMVC
Sbjct: 1007 YVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEKEMDHMSKVPYASAIGSLMYAMVC 1066
Query: 115 TRPDISHAVSVVSRYMENPGKTHWEAVKWILRYLSGSL 2
TRPDI+HAV VVSR+M PGK HWEAVKWILRYL GSL
Sbjct: 1067 TRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSL 1104
>gb|ABG22121.1| polyprotein [Solanum melongena]
Length = 361
Score = 146 bits (369), Expect = 3e-33
Identities = 69/99 (69%), Positives = 87/99 (87%), Gaps = 1/99 (1%)
Frame = -1
Query: 295 YIEKVLQRFGIQK-AKPVSIPLASYLRLSAQLSPQTDDEKEFMSRVPYGSAVGSLMYAMV 119
Y++KVLQRFGI +KPVS PLA +L+LS+QLSP+TD+E+E+M++VPY +AVGSLMYAMV
Sbjct: 143 YLKKVLQRFGINDDSKPVSTPLAPHLKLSSQLSPKTDEEREYMAKVPYANAVGSLMYAMV 202
Query: 118 CTRPDISHAVSVVSRYMENPGKTHWEAVKWILRYLSGSL 2
CTR DIS AVSVVSRYM +PGK HW+AVKWILRY+ ++
Sbjct: 203 CTRSDISQAVSVVSRYMHDPGKGHWQAVKWILRYIKNTV 241