BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00054741
         (393 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containi...   175   7e-42
ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containi...   172   4e-41
ref|XP_007049307.1| Pentatricopeptide repeat superfamily protein...   169   4e-40
ref|XP_002531691.1| pentatricopeptide repeat-containing protein,...   166   3e-39
ref|XP_006418526.1| hypothetical protein EUTSA_v10002407mg [Eutr...   160   1e-37
gb|EXC34901.1| hypothetical protein L484_020017 [Morus notabilis]     160   2e-37
ref|XP_006447757.1| hypothetical protein CICLE_v10014482mg [Citr...   157   1e-36
ref|XP_004295354.1| PREDICTED: pentatricopeptide repeat-containi...   156   3e-36
ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containi...   132   4e-29
ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containi...   131   1e-28
emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]   131   1e-28
emb|CBI28420.3| unnamed protein product [Vitis vinifera]              130   2e-28
emb|CBI33923.3| unnamed protein product [Vitis vinifera]              129   4e-28
ref|XP_006359300.1| PREDICTED: pentatricopeptide repeat-containi...   127   1e-27
ref|XP_002521565.1| pentatricopeptide repeat-containing protein,...   127   1e-27
gb|EYU39396.1| hypothetical protein MIMGU_mgv1a026743mg, partial...   127   2e-27
ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containi...   127   2e-27
emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]   127   2e-27
ref|XP_002528778.1| pentatricopeptide repeat-containing protein,...   124   1e-26
emb|CBI22243.3| unnamed protein product [Vitis vinifera]              123   2e-26

>ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449511814|ref|XP_004164061.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 681

 Score =  175 bits (443), Expect = 7e-42
 Identities = 83/129 (64%), Positives = 104/129 (80%)
 Frame = -1

Query: 393 DDAIILFCELLEESVVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSS 214
           +DAI LFC+LL + V  P S+  PCV+KGCA+L A++EGKQIH L+LK GFG D +V SS
Sbjct: 97  NDAIALFCKLLCDFV--PDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSS 154

Query: 213 LVNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEMPERDSFSW 34
           LV++Y KC EI   R +FDR+E+KD+VSWNSL+DGYARCGEI  A  +F+EMPE+DSFSW
Sbjct: 155 LVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMPEKDSFSW 214

Query: 33  TVLIDGYSK 7
           T+LIDG SK
Sbjct: 215 TILIDGLSK 223



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 31/110 (28%), Positives = 55/110 (50%)
 Frame = -1

Query: 387 AIILFCELLEESVVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSSLV 208
           A+ LF  +L E +  P        +   + + ++  G+ +H+ I+K+GF +D  + + L+
Sbjct: 292 ALKLFEVMLREDI-SPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLI 350

Query: 207 NLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEM 58
            +Y KC  + SA  +F  +  K L  W S++ G    G +     LFDEM
Sbjct: 351 EMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEM 400


>ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  172 bits (436), Expect = 4e-41
 Identities = 81/129 (62%), Positives = 102/129 (79%)
 Frame = -1

Query: 390 DAIILFCELLEESVVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSSL 211
           D I+LF EL+ E +  P ++  PCVIKGCA+L  ++EGKQIH L LK GFGSD++V+ SL
Sbjct: 96  DGIVLFHELVHEYL--PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSL 153

Query: 210 VNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEMPERDSFSWT 31
           VN+Y KC EI  AR +FD + +KD+V WNSL+DGYARCGEI  A +LF+EMPERD+FSWT
Sbjct: 154 VNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPERDAFSWT 213

Query: 30  VLIDGYSKC 4
           VL+DG SKC
Sbjct: 214 VLVDGLSKC 222



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 29/74 (39%), Positives = 49/74 (66%)
 Frame = -1

Query: 234 DLYVRSSLVNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEMP 55
           D +  + LV+   KC ++ SAR LFD++  ++LVSWN++++GY + G+  +A  LF +MP
Sbjct: 208 DAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELFYQMP 267

Query: 54  ERDSFSWTVLIDGY 13
             D  +W ++I GY
Sbjct: 268 IWDLVTWNLMIAGY 281


>ref|XP_007049307.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao] gi|508701568|gb|EOX93464.1| Pentatricopeptide
           repeat superfamily protein, putative [Theobroma cacao]
          Length = 682

 Score =  169 bits (428), Expect = 4e-40
 Identities = 81/129 (62%), Positives = 95/129 (73%)
 Frame = -1

Query: 390 DAIILFCELLEESVVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSSL 211
           +AI LF +LL      P  + FPCVIKGCA+L A+ EGKQIH L+LK GFG D + + SL
Sbjct: 99  EAIFLFAQLLHH--FPPDEFTFPCVIKGCAKLNAVNEGKQIHGLVLKLGFGLDKFTQGSL 156

Query: 210 VNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEMPERDSFSWT 31
           VNLY KC EI SA  +FD +  KDLV WNSLLDGYARCGE+  A + F+EMPERD FSWT
Sbjct: 157 VNLYSKCGEIASAHKVFDVMGEKDLVLWNSLLDGYARCGEVKVAMKAFEEMPERDCFSWT 216

Query: 30  VLIDGYSKC 4
           VLIDG +KC
Sbjct: 217 VLIDGLAKC 225



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 27/73 (36%), Positives = 52/73 (71%)
 Frame = -1

Query: 234 DLYVRSSLVNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEMP 55
           D +  + L++   KC E+ +AR +F+++ N++LVSWN++++GY + G+I +A +LF+ MP
Sbjct: 211 DCFSWTVLIDGLAKCGEVETAREIFEKMPNRNLVSWNTMINGYMKAGDINSACKLFNRMP 270

Query: 54  ERDSFSWTVLIDG 16
           +R+  +W  +I G
Sbjct: 271 KRNLITWNSIIGG 283



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/111 (30%), Positives = 56/111 (50%)
 Frame = -1

Query: 390 DAIILFCELLEESVVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSSL 211
           +A+ +F  +L+E   RP       VI   + L ++ +G+ +H+ I+K G   D  V + L
Sbjct: 292 EALEMFKRMLKEEF-RPSHATLVSVISAVSGLASLGKGRSMHSYIVKNGIELDGVVGTVL 350

Query: 210 VNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEM 58
           + +Y KC  I SA  +F  + NK L  W +++ G +  G    A   F EM
Sbjct: 351 IEMYSKCGSIDSALTIFRTISNKKLGHWTAIIVGLSIHGMAEHALEFFLEM 401


>ref|XP_002531691.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528667|gb|EEF30682.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 434

 Score =  166 bits (420), Expect = 3e-39
 Identities = 78/129 (60%), Positives = 99/129 (76%)
 Frame = -1

Query: 390 DAIILFCELLEESVVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSSL 211
           DAI LF +LL E    P  +  PCVIKGCA+L A +EGKQIH L+LK GFG + +V SSL
Sbjct: 91  DAITLFSQLLHE--FNPDGFTLPCVIKGCARLHATKEGKQIHGLVLKLGFGLNKFVSSSL 148

Query: 210 VNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEMPERDSFSWT 31
           VN+Y KC +I SA+ +F  +++KDLVSWNSL+DGY +CG++    +LF+EMPERD FSWT
Sbjct: 149 VNMYSKCKDIDSAKKVFLSMDDKDLVSWNSLIDGYVKCGQVELGMKLFEEMPERDLFSWT 208

Query: 30  VLIDGYSKC 4
           VLIDG+SKC
Sbjct: 209 VLIDGFSKC 217



 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 29/74 (39%), Positives = 52/74 (70%)
 Frame = -1

Query: 234 DLYVRSSLVNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEMP 55
           DL+  + L++ + KC ++  AR LFD++ +++LVSWN++++GY + G+   A  LFD+MP
Sbjct: 203 DLFSWTVLIDGFSKCGKVDVARELFDKMPSRNLVSWNAMINGYMKAGDFVLASELFDKMP 262

Query: 54  ERDSFSWTVLIDGY 13
           E++  SW  ++ GY
Sbjct: 263 EKNLISWNSMVAGY 276



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/111 (29%), Positives = 53/111 (47%)
 Frame = -1

Query: 390 DAIILFCELLEESVVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSSL 211
           +A+ LF  +LE     P            + L ++  GK +H+ ++K GF  D  + +SL
Sbjct: 284 EALDLFLTMLERDFT-PNHATLVSTFSAVSGLASLSTGKWMHSYMVKNGFQLDGVLATSL 342

Query: 210 VNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEM 58
           +N+Y KC  I SA ++F  +  K L  W +++ G    G    A   F EM
Sbjct: 343 INMYSKCGNIESALSVFQLITKKKLGHWTAIIVGLGMHGMADNALEFFHEM 393


>ref|XP_006418526.1| hypothetical protein EUTSA_v10002407mg [Eutrema salsugineum]
           gi|557096454|gb|ESQ36962.1| hypothetical protein
           EUTSA_v10002407mg [Eutrema salsugineum]
          Length = 784

 Score =  160 bits (406), Expect = 1e-37
 Identities = 73/128 (57%), Positives = 97/128 (75%)
 Frame = -1

Query: 390 DAIILFCELLEESVVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSSL 211
           DAI LFC++L E    P ++  PCV+KGC++LCA+EEGKQIH    K GFG D +V+SSL
Sbjct: 199 DAIRLFCDMLTE--FPPDNFTLPCVVKGCSRLCAVEEGKQIHGFSTKLGFGFDKFVQSSL 256

Query: 210 VNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEMPERDSFSWT 31
           V+ Y KC  +  AR +FD++  KDLV+WNSL+DGYAR G++  AR+LFDE+P RDS+SWT
Sbjct: 257 VSFYSKCGLLDCARKVFDKMGEKDLVTWNSLIDGYARSGDVETARKLFDEIPRRDSYSWT 316

Query: 30  VLIDGYSK 7
            L+ G+SK
Sbjct: 317 ALLHGFSK 324



 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 30/74 (40%), Positives = 51/74 (68%)
 Frame = -1

Query: 234 DLYVRSSLVNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEMP 55
           D Y  ++L++ + K  +I +AR +FD++  K+LVSWN++++GY R G+  +A  LF+ MP
Sbjct: 311 DSYSWTALLHGFSKSGKIEAARDVFDKMPTKNLVSWNAMINGYMRSGDFESACELFNTMP 370

Query: 54  ERDSFSWTVLIDGY 13
           ER+  +W  +I GY
Sbjct: 371 ERNLITWNSIIAGY 384



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
 Frame = -1

Query: 393 DDAIILFCELLEES---VVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYV 223
           ++A+ +F  +L+E     ++P +  F  +I   A    +  GK +H+ ++K G   D  +
Sbjct: 391 EEALSMFLRMLQEEEDDFIKPNNATFTSLISAVAASAILSTGKWVHSYMVKNGMAIDGVI 450

Query: 222 RSSLVNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEMPE 52
            + L+ +Y KC  I SA  +F  +  K L  WNS++ G    G    A  LF +M E
Sbjct: 451 GTLLIEMYSKCGSIESALTVFTSIHRKKLGHWNSVIVGLGMHGMADEALELFKKMQE 507


>gb|EXC34901.1| hypothetical protein L484_020017 [Morus notabilis]
          Length = 686

 Score =  160 bits (404), Expect = 2e-37
 Identities = 76/129 (58%), Positives = 97/129 (75%)
 Frame = -1

Query: 390 DAIILFCELLEESVVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSSL 211
           DAI LF +L+ E    P  +  P VIKGCA+L A+ EGKQIH L++K GFG D +V+SSL
Sbjct: 103 DAICLFHDLVHEFT--PDCFTLPSVIKGCARLNAVPEGKQIHGLVVKIGFGLDKFVQSSL 160

Query: 210 VNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEMPERDSFSWT 31
           V++Y +C E+  AR +FD++  KDLV WN L+DGYARCGE+  A +LFDEMPERD FSWT
Sbjct: 161 VSMYSRCGEMGYARKVFDQMGEKDLVLWNCLIDGYARCGEVEIALQLFDEMPERDYFSWT 220

Query: 30  VLIDGYSKC 4
            L+DG+SKC
Sbjct: 221 CLVDGFSKC 229



 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 39/106 (36%), Positives = 66/106 (62%)
 Frame = -1

Query: 330 IFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSSLVNLYCKCNEIVSARALFDRL 151
           ++ C+I G A+   +E   Q+   + +     D +  + LV+ + KC  +  AR +FDR+
Sbjct: 187 LWNCLIDGYARCGEVEIALQLFDEMPER----DYFSWTCLVDGFSKCGRVEMARDVFDRM 242

Query: 150 ENKDLVSWNSLLDGYARCGEIGAARRLFDEMPERDSFSWTVLIDGY 13
            +++LVSWN++++GY + G++  ARRLFDEMP RD  +W  +I GY
Sbjct: 243 PSRNLVSWNAMINGYMKSGDVEMARRLFDEMPTRDVITWNSMIAGY 288



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 34/111 (30%), Positives = 59/111 (53%)
 Frame = -1

Query: 390 DAIILFCELLEESVVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSSL 211
           +A+ LF  +L+E +V P    F   +   + L  + +GK IH+L++K G  S+  + +SL
Sbjct: 296 EALYLFIAMLKEGLV-PNHTTFVGALSAVSGLAVLSKGKWIHSLMVKCGIESEGVLGTSL 354

Query: 210 VNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEM 58
           + +Y KC  + SA ++F  +  K L  W +++ G    G    A  +F EM
Sbjct: 355 IEMYSKCGSVESALSVFRAISKKKLGHWTAIIVGLGMHGMAERALEMFSEM 405


>ref|XP_006447757.1| hypothetical protein CICLE_v10014482mg [Citrus clementina]
           gi|568830445|ref|XP_006469509.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Citrus sinensis]
           gi|557550368|gb|ESR60997.1| hypothetical protein
           CICLE_v10014482mg [Citrus clementina]
          Length = 689

 Score =  157 bits (398), Expect = 1e-36
 Identities = 75/129 (58%), Positives = 97/129 (75%)
 Frame = -1

Query: 390 DAIILFCELLEESVVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSSL 211
           +A+ LFC+LL   ++ P ++  PCVIKG A+L AI+EGKQIH L+ K GFG D +V SSL
Sbjct: 105 EALTLFCDLLHRFLL-PDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDKFVLSSL 163

Query: 210 VNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEMPERDSFSWT 31
           V++Y K  EI   R +FD L++KDLVSWN L+DGY + GE+  A +LFDEMPERD FSWT
Sbjct: 164 VSMYAKFGEIDLGRRVFDVLDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEMPERDLFSWT 223

Query: 30  VLIDGYSKC 4
            L+DG+SKC
Sbjct: 224 CLVDGFSKC 232



 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 29/74 (39%), Positives = 51/74 (68%)
 Frame = -1

Query: 234 DLYVRSSLVNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEMP 55
           DL+  + LV+ + KC ++  AR +F R+ N++LVSWN++++GY + G++ +A  LF++M 
Sbjct: 218 DLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNLVSWNAMINGYMKAGDVDSACELFNDME 277

Query: 54  ERDSFSWTVLIDGY 13
            RD  +W  +I GY
Sbjct: 278 IRDLITWNSMIAGY 291


>ref|XP_004295354.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 821

 Score =  156 bits (394), Expect = 3e-36
 Identities = 73/129 (56%), Positives = 93/129 (72%)
 Frame = -1

Query: 390 DAIILFCELLEESVVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSSL 211
           DA++LF  LL      P ++  P V+K CA+L A+ EGKQ+HAL LK G G ++YV+SSL
Sbjct: 238 DALLLFFRLLHHHA--PDNFTLPSVVKACARLGAVAEGKQVHALALKIGLGLEMYVQSSL 295

Query: 210 VNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEMPERDSFSWT 31
           V+LY KC  I  AR +FD +  +DLV+WNSL+DGYARCG +  A  LF+EM ERD FSWT
Sbjct: 296 VSLYSKCGAIECARKVFDEMRERDLVAWNSLIDGYARCGRVDVAVELFEEMEERDEFSWT 355

Query: 30  VLIDGYSKC 4
           VL+DG SKC
Sbjct: 356 VLVDGLSKC 364



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 29/67 (43%), Positives = 43/67 (64%)
 Frame = -1

Query: 213 LVNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEMPERDSFSW 34
           LV+   KC  +  AR +F+R+ +K++VSWN++++GY + GE   AR LF  M  RD  SW
Sbjct: 357 LVDGLSKCGHVKKAREVFERMPSKNVVSWNAMINGYMKGGEFEKARELFGRMGSRDVISW 416

Query: 33  TVLIDGY 13
             +I GY
Sbjct: 417 NSMISGY 423



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 36/111 (32%), Positives = 64/111 (57%)
 Frame = -1

Query: 390 DAIILFCELLEESVVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSSL 211
           +A+ LF E+LEE V RP       V+   + L A+ +G+ +H++++K GF  +  + +SL
Sbjct: 431 EALELFREVLEEDV-RPTPATLVSVLSAVSGLAALSKGRIVHSVMVKHGFELEGVLGTSL 489

Query: 210 VNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEM 58
           +++Y KC  I SA A+F+ ++ K +  W +++ G    G      +LF EM
Sbjct: 490 IDMYSKCGSIDSAMAVFEGIQRKKVGHWTAIIVGLGMHGMADQVLQLFLEM 540


>ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 622

 Score =  132 bits (333), Expect = 4e-29
 Identities = 60/126 (47%), Positives = 91/126 (72%)
 Frame = -1

Query: 393 DDAIILFCELLEESVVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSS 214
           ++A++L+  +L  SV    +Y FP ++K C+ + A+EE +QIHA I+K GFGS++Y  +S
Sbjct: 100 EEALLLYHHMLYHSVPH-NAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNS 158

Query: 213 LVNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEMPERDSFSW 34
           L+N+Y K  +I SAR LFD+++ +D VSWNS++DGY +CGEI  A  +F+ MPER+  SW
Sbjct: 159 LLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISW 218

Query: 33  TVLIDG 16
           T +I G
Sbjct: 219 TSMISG 224


>ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
          Length = 719

 Score =  131 bits (329), Expect = 1e-28
 Identities = 62/125 (49%), Positives = 86/125 (68%)
 Frame = -1

Query: 387 AIILFCELLEESVVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSSLV 208
           A+  + E +    V P  Y FP ++K C ++ +I +G++IHA ILK GF  DL+VR+SL+
Sbjct: 142 ALGFYYEQMVRKCVAPNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLI 201

Query: 207 NLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEMPERDSFSWTV 28
           ++Y  C  I  ARA+F+     DLV+WNS++DGY + GEIGAAR LF+EMPERD FSW  
Sbjct: 202 HMYSVCGRIGDARAMFEVCSISDLVTWNSMIDGYVKNGEIGAARELFEEMPERDLFSWNS 261

Query: 27  LIDGY 13
           +I GY
Sbjct: 262 MIAGY 266



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 35/116 (30%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
 Frame = -1

Query: 393 DDAIILFCELLEESVVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTG-FGSDLYVRS 217
           D+ + +F +++ E++  P       V+  CA L  ++ GK IH+ I        D+ + +
Sbjct: 335 DECLRMFDKMMGETM--PNEATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEPDVLLST 392

Query: 216 SLVNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEMPER 49
           +L+ +Y KC  +  AR +FD++ N+ +VSWNS++ GY   G+   A  +F +M +R
Sbjct: 393 ALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHGQADKALEMFLDMEKR 448


>emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
          Length = 622

 Score =  131 bits (329), Expect = 1e-28
 Identities = 60/126 (47%), Positives = 90/126 (71%)
 Frame = -1

Query: 393 DDAIILFCELLEESVVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSS 214
           ++A++L+  +L  SV    +Y FP ++K C+ + A EE +QIHA I+K GFGS++Y  +S
Sbjct: 100 EEALLLYHHMLYHSVPH-NAYTFPFLLKACSSMSASEETQQIHAHIIKMGFGSEIYTTNS 158

Query: 213 LVNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEMPERDSFSW 34
           L+N+Y K  +I SAR LFD+++ +D VSWNS++DGY +CGEI  A  +F+ MPER+  SW
Sbjct: 159 LLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISW 218

Query: 33  TVLIDG 16
           T +I G
Sbjct: 219 TSMISG 224


>emb|CBI28420.3| unnamed protein product [Vitis vinifera]
          Length = 631

 Score =  130 bits (326), Expect = 2e-28
 Identities = 66/137 (48%), Positives = 90/137 (65%), Gaps = 11/137 (8%)
 Frame = -1

Query: 390 DAIILFCELLEESVVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSSL 211
           D I+LF EL+ E +  P ++  PCVIKGCA+L  ++EGKQIH L LK GFGSD++V+ SL
Sbjct: 99  DGIVLFHELVHEYL--PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSL 156

Query: 210 VNLYCKCNEIVSARALFDRLENKDLVSWNSLLD-----------GYARCGEIGAARRLFD 64
           VN+Y KC EI  AR +FD + +KD+V WNSL+D           GY + G+  +A  LF 
Sbjct: 157 VNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDSALELFY 216

Query: 63  EMPERDSFSWTVLIDGY 13
           +MP  D  +W ++I GY
Sbjct: 217 QMPIWDLVTWNLMIAGY 233


>emb|CBI33923.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  129 bits (324), Expect = 4e-28
 Identities = 60/112 (53%), Positives = 81/112 (72%)
 Frame = -1

Query: 348 VRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSSLVNLYCKCNEIVSAR 169
           V P  Y FP ++K C ++ +I +G++IHA ILK GF  DL+VR+SL+++Y  C  I  AR
Sbjct: 6   VAPNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGRIGDAR 65

Query: 168 ALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEMPERDSFSWTVLIDGY 13
           A+F+     DLV+WNS++DGY + GEIGAAR LF+EMPERD FSW  +I GY
Sbjct: 66  AMFEVCSISDLVTWNSMIDGYVKNGEIGAARELFEEMPERDLFSWNSMIAGY 117



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 35/116 (30%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
 Frame = -1

Query: 393 DDAIILFCELLEESVVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTG-FGSDLYVRS 217
           D+ + +F +++ E++  P       V+  CA L  ++ GK IH+ I        D+ + +
Sbjct: 186 DECLRMFDKMMGETM--PNEATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEPDVLLST 243

Query: 216 SLVNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEMPER 49
           +L+ +Y KC  +  AR +FD++ N+ +VSWNS++ GY   G+   A  +F +M +R
Sbjct: 244 ALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHGQADKALEMFLDMEKR 299


>ref|XP_006359300.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Solanum tuberosum]
          Length = 559

 Score =  127 bits (320), Expect = 1e-27
 Identities = 58/127 (45%), Positives = 86/127 (67%)
 Frame = -1

Query: 387 AIILFCELLEESVVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSSLV 208
           ++ LF E+L+  V  P  + +P V+K  A+LC +  G+ +H  +LK GF  DLYV +SL+
Sbjct: 98  SLSLFVEMLQNEVF-PNYFTYPFVVKCLAKLCEVRIGRSVHGGVLKNGFDVDLYVSNSLI 156

Query: 207 NLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEMPERDSFSWTV 28
           ++Y  C +++ AR +FD +  K+LVSWNS+LDGY +CG++   R +FD M ERD  SW+ 
Sbjct: 157 HMYGSCGDVLCARKVFDEMPVKNLVSWNSMLDGYGKCGDVVLMREVFDSMIERDVVSWSS 216

Query: 27  LIDGYSK 7
           LIDGY K
Sbjct: 217 LIDGYVK 223



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
 Frame = -1

Query: 318 VIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSSLVNLYCKCNEIVSARALF-DRLENK 142
           V+  CA L A+E+G+ +H  +++      L +R+SLV++Y KC  +  A  +F + L  K
Sbjct: 252 VLGACAHLGALEQGRVMHEYVVENKLPMTLVLRTSLVDMYAKCGAVEEALVVFREALGRK 311

Query: 141 -DLVSWNSLLDGYARCGEIGAARRLFDEM 58
            D++ WN+++ G A  G +  +  L+ EM
Sbjct: 312 TDVLIWNAMIGGLATHGLVTESLELYKEM 340


>ref|XP_002521565.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539243|gb|EEF40836.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 338

 Score =  127 bits (320), Expect = 1e-27
 Identities = 60/127 (47%), Positives = 90/127 (70%)
 Frame = -1

Query: 393 DDAIILFCELLEESVVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSS 214
           ++A+IL+ ++L  SV   G Y FP ++K C+ L AIE+ +Q+HA I+K GFGSD+Y  +S
Sbjct: 93  EEALILYHQMLCHSVPHNG-YTFPFLLKACSSLSAIEKAQQVHAQIIKLGFGSDVYTTNS 151

Query: 213 LVNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEMPERDSFSW 34
           L++ Y     I SAR +FDR+ + D VSWNS++DGY +CGE   A  LF +MPE+++ S+
Sbjct: 152 LLHAYAASGFIESARIIFDRIPHPDTVSWNSIIDGYVKCGETETAYELFKDMPEKNAISF 211

Query: 33  TVLIDGY 13
           TV+I G+
Sbjct: 212 TVMISGH 218


>gb|EYU39396.1| hypothetical protein MIMGU_mgv1a026743mg, partial [Mimulus
           guttatus]
          Length = 670

 Score =  127 bits (318), Expect = 2e-27
 Identities = 53/119 (44%), Positives = 85/119 (71%)
 Frame = -1

Query: 363 LEESVVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSSLVNLYCKCNE 184
           LE+ V RP + ++  V++ C +  A++EGK++H+ I  +GF   +++ + +++LYCKC  
Sbjct: 55  LEKQVHRPSASLYAAVLQLCIEKRALDEGKRVHSHIKGSGFAPGVFISNKILDLYCKCES 114

Query: 183 IVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEMPERDSFSWTVLIDGYSK 7
           I  AR LFD + ++D+ SWN+L+ GYA+ G +  AR+LFDEMP+RD+FSWT +I GY K
Sbjct: 115 ISDARKLFDEMGDRDVCSWNTLISGYAKMGRVSEARKLFDEMPKRDNFSWTAMISGYVK 173



 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 40/112 (35%), Positives = 67/112 (59%)
 Frame = -1

Query: 393 DDAIILFCELLEESVVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSS 214
           ++ + LF + L  S ++P  + F  V+  CA   A E G+Q+H L+++ GF    +  S+
Sbjct: 280 EEGLSLFSDFLS-SGIKPNEFTFAGVLNACAHQTAEELGRQVHGLMMRIGFDPSSFAASA 338

Query: 213 LVNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEM 58
           LV++Y KC  +  A  +F+ L   DLVS+ SL++GYA+ G+   A +LFD +
Sbjct: 339 LVHMYTKCGSVERANRVFNWLPKPDLVSYTSLINGYAQNGQPHEALKLFDSL 390



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/110 (30%), Positives = 56/110 (50%)
 Frame = -1

Query: 390 DAIILFCELLEESVVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSSL 211
           DA+ L+  +   S      +     +   A + ++  GK+IHA I + G  SD  V S+L
Sbjct: 179 DALELYRLMQRNSNFACNKFTISSALAASAAIQSLRLGKEIHAHITRMGLDSDAVVWSAL 238

Query: 210 VNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDE 61
           +++Y KC  +  A+ +FDR    D+VSW +++D Y   G+      LF +
Sbjct: 239 LDVYGKCGSLNEAKYIFDRTVGNDIVSWTTMIDRYFGDGKWEEGLSLFSD 288


>ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
           gi|297739328|emb|CBI28979.3| unnamed protein product
           [Vitis vinifera]
          Length = 585

 Score =  127 bits (318), Expect = 2e-27
 Identities = 54/110 (49%), Positives = 76/110 (69%)
 Frame = -1

Query: 336 SYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSSLVNLYCKCNEIVSARALFD 157
           +Y +P V+K C  +C + EG  +    +K GFG D++V + L+++YC+C E   ARA+FD
Sbjct: 110 NYTYPFVLKACGAMCGLLEGGLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFD 169

Query: 156 RLENKDLVSWNSLLDGYARCGEIGAARRLFDEMPERDSFSWTVLIDGYSK 7
               KDLVSWNS+L GY  CGE+  A+ +FDEMPERD  SW+++IDGY K
Sbjct: 170 GFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDVVSWSIMIDGYGK 219



 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 31/65 (47%), Positives = 48/65 (73%)
 Frame = -1

Query: 195 KCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEMPERDSFSWTVLIDG 16
           K  E+  AR  FD +  +DLVSWNS++DGYA+ GE+  AR +FD+M +++  SW+++IDG
Sbjct: 220 KMGEVNRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVAREIFDKMLQKNVISWSIMIDG 279

Query: 15  YSKCR 1
           Y++ R
Sbjct: 280 YAQHR 284



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 31/111 (27%), Positives = 61/111 (54%)
 Frame = -1

Query: 390 DAIILFCELLEESVVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSSL 211
           +A+ LF ++L + + +P        +  C+QL A+++G+ IH  + +     D+ V+++L
Sbjct: 288 EALNLFRQMLCQGI-KPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTAL 346

Query: 210 VNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEM 58
           V++Y KC     AR +F+ +  +++VSWN ++ G    G    A   F +M
Sbjct: 347 VDMYLKCGSRDEARRIFNSMPERNVVSWNVMIVGLGMNGFGKEALECFTQM 397


>emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
          Length = 585

 Score =  127 bits (318), Expect = 2e-27
 Identities = 54/110 (49%), Positives = 76/110 (69%)
 Frame = -1

Query: 336 SYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSSLVNLYCKCNEIVSARALFD 157
           +Y +P V+K C  +C + EG  +    +K GFG D++V + L+++YC+C E   ARA+FD
Sbjct: 110 NYTYPFVLKACGAMCGLLEGGLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFD 169

Query: 156 RLENKDLVSWNSLLDGYARCGEIGAARRLFDEMPERDSFSWTVLIDGYSK 7
               KDLVSWNS+L GY  CGE+  A+ +FDEMPERD  SW+++IDGY K
Sbjct: 170 GFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDVVSWSIMIDGYGK 219



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 30/65 (46%), Positives = 47/65 (72%)
 Frame = -1

Query: 195 KCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEMPERDSFSWTVLIDG 16
           K  E+  AR  FD +  +DLVSWNS++DGYA+ GE+  AR +F++M +++  SW+++IDG
Sbjct: 220 KMGEVNRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVAREIFBKMLQKNVISWSIMIDG 279

Query: 15  YSKCR 1
           Y+  R
Sbjct: 280 YAXHR 284



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 31/111 (27%), Positives = 61/111 (54%)
 Frame = -1

Query: 390 DAIILFCELLEESVVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSSL 211
           +A+ LF ++L + + +P        +  C+QL A+++G+ IH  + +     D+ V+++L
Sbjct: 288 EALNLFRQMLCQGI-KPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTAL 346

Query: 210 VNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEM 58
           V++Y KC     AR +F+ +  +++VSWN ++ G    G    A   F +M
Sbjct: 347 VDMYLKCGSXDEARXIFNSMPERNVVSWNVMIVGLGMNGFGKEALECFXQM 397


>ref|XP_002528778.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531781|gb|EEF33600.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 518

 Score =  124 bits (311), Expect = 1e-26
 Identities = 56/112 (50%), Positives = 79/112 (70%)
 Frame = -1

Query: 348 VRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSSLVNLYCKCNEIVSAR 169
           V P  Y FP ++K CA + +++EG++ HA ++K GF  D YVR+SL+++Y  C  ++ AR
Sbjct: 152 VLPNRYTFPLLVKVCADIGSLKEGQKAHACVVKFGFEFDAYVRNSLLHMYSACGRVLDAR 211

Query: 168 ALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEMPERDSFSWTVLIDGY 13
            LF+     DLVSWNS++ GY + G+IG AR LFDEMPERD+FSW  +I GY
Sbjct: 212 LLFESGFVLDLVSWNSMIIGYVKNGDIGLARELFDEMPERDAFSWNSMISGY 263



 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 37/111 (33%), Positives = 59/111 (53%)
 Frame = -1

Query: 390 DAIILFCELLEESVVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSSL 211
           + + LF  ++EE  +RP       V+  CA    ++ GK IH+ I      SD  + ++L
Sbjct: 333 ECLKLFDRMIEERELRPNKASLMSVLTACANFRRLDLGKWIHSYIKDNEVESDELLSTAL 392

Query: 210 VNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEM 58
           + +Y KC  +  AR +F ++ +K +VSWNS++ GYA  G    A   F EM
Sbjct: 393 LTMYAKCGMMDFARHIFTKMPHKSVVSWNSMIMGYAINGHAEKALETFLEM 443


>emb|CBI22243.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  123 bits (309), Expect = 2e-26
 Identities = 56/128 (43%), Positives = 86/128 (67%)
 Frame = -1

Query: 390 DAIILFCELLEESVVRPGSYIFPCVIKGCAQLCAIEEGKQIHALILKTGFGSDLYVRSSL 211
           +AI L+ ++ E   VRP  + FP V+K C +LC ++ G  +H  + + GF S+ +VR++L
Sbjct: 61  NAISLYSQM-ENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTL 119

Query: 210 VNLYCKCNEIVSARALFDRLENKDLVSWNSLLDGYARCGEIGAARRLFDEMPERDSFSWT 31
           +  +  C ++  ARALFD    +D+V+W++L  GYAR GE+G AR+LFDEMP +D  SW 
Sbjct: 120 IYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWN 179

Query: 30  VLIDGYSK 7
           V+I GY+K
Sbjct: 180 VMITGYAK 187



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
 Frame = -1

Query: 318 VIKGCAQLCAIEEGKQIHALILKTGFGS-DLYVRSSLVNLYCKCNEIVSARALFDRLENK 142
           ++  C  L  ++ G++IH  I + GF    + + ++L+++Y KC  IV A  +F  +  K
Sbjct: 247 LLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREK 306

Query: 141 DLVSWNSLLDGYARCGEIGAARRLFDEM 58
           D+ +WNS+L G A  G    +  LF EM
Sbjct: 307 DVSTWNSVLGGLAFHGHAEKSIHLFTEM 334