BLASTX nr result
ID: Cocculus23_contig00054546
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00054546
(375 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006494922.1| PREDICTED: uncharacterized protein LOC102616... 194 1e-49
ref|XP_006493879.1| PREDICTED: uncharacterized protein LOC102616... 189 4e-48
ref|XP_006480387.1| PREDICTED: uncharacterized protein LOC102611... 189 9e-48
gb|AAL06412.1|AF378038_1 reverse transcriptase [Gossypium hirsutum] 187 9e-48
ref|XP_006491718.1| PREDICTED: uncharacterized protein LOC102620... 192 4e-47
gb|AHN65357.1| reverse transcriptase [Glycine max] 181 1e-45
ref|XP_004289020.1| PREDICTED: uncharacterized protein LOC101300... 179 3e-45
ref|XP_004288740.1| PREDICTED: uncharacterized protein LOC101297... 179 5e-45
gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis] 178 1e-44
ref|XP_004289462.1| PREDICTED: uncharacterized protein LOC101311... 178 2e-44
gb|ACY01934.1| hypothetical protein [Beta vulgaris] 183 2e-44
gb|AAL06403.1|AF378022_1 reverse transcriptase [Hordeum vulgare] 181 5e-44
gb|ABG37658.1| integrase [Populus trichocarpa] 181 9e-44
pir||F85074 hypothetical protein AT4g07600 [imported] - Arabidop... 171 2e-43
gb|ABD63145.1| F7F22.17, putative [Asparagus officinalis] 174 3e-43
gb|ABG37668.1| gag protein [Populus trichocarpa] 179 4e-43
gb|ABG37657.1| integrase [Populus trichocarpa] 179 4e-43
gb|AAF79809.1|AC020646_32 T32E20.9 [Arabidopsis thaliana] 171 8e-43
gb|AAL06420.1|AF378078_1 reverse transcriptase [Arabidopsis thal... 177 1e-42
gb|AAL06419.1|AF378075_1 reverse transcriptase [Arabidopsis thal... 177 1e-42
>ref|XP_006494922.1| PREDICTED: uncharacterized protein LOC102616968 [Citrus sinensis]
Length = 1015
Score = 194 bits (492), Expect(2) = 1e-49
Identities = 87/110 (79%), Positives = 98/110 (89%)
Frame = +2
Query: 41 FHQIPVAPEDQEKTTFTCPFGTFAYRRMPFGLCNGPAMFQRCMVIIFSDFVENIIEVFMD 220
++QI +APEDQEKTTFTCPFGTFAYRRMPFGLCN PA FQRCM+ IFSD+VENIIEVFMD
Sbjct: 351 YNQIVIAPEDQEKTTFTCPFGTFAYRRMPFGLCNAPATFQRCMMSIFSDYVENIIEVFMD 410
Query: 221 DFTVYSDSFDACLTNLTKEFKRCRETNFVLNYEKCHFMVDQGIILGHIVS 370
DFTVY DSFD CL NLT KRC +TN VLN+EKCHFMV+QGI+LGH++S
Sbjct: 411 DFTVYGDSFDKCLDNLTLVLKRCIDTNLVLNWEKCHFMVNQGIVLGHVIS 460
Score = 28.5 bits (62), Expect(2) = 1e-49
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 3 GRSYYCCLDGYSGF 44
G S+YC LDGYSG+
Sbjct: 338 GHSHYCFLDGYSGY 351
>ref|XP_006493879.1| PREDICTED: uncharacterized protein LOC102616274 [Citrus sinensis]
Length = 1170
Score = 189 bits (479), Expect(2) = 4e-48
Identities = 85/110 (77%), Positives = 96/110 (87%)
Frame = +2
Query: 41 FHQIPVAPEDQEKTTFTCPFGTFAYRRMPFGLCNGPAMFQRCMVIIFSDFVENIIEVFMD 220
++QI + PEDQEKTTFTCPFGTFAYRRMPFGLCN PA FQRCM+ IFSD+VENIIEVFMD
Sbjct: 933 YNQIVITPEDQEKTTFTCPFGTFAYRRMPFGLCNAPATFQRCMMSIFSDYVENIIEVFMD 992
Query: 221 DFTVYSDSFDACLTNLTKEFKRCRETNFVLNYEKCHFMVDQGIILGHIVS 370
DFTVY DSFD CL NLT KRC +TN VL +EKCHFMV+QGI+LGH++S
Sbjct: 993 DFTVYGDSFDKCLDNLTLVLKRCIDTNLVLIWEKCHFMVNQGIVLGHVIS 1042
Score = 28.5 bits (62), Expect(2) = 4e-48
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 3 GRSYYCCLDGYSGF 44
G S+YC LDGYSG+
Sbjct: 920 GHSHYCFLDGYSGY 933
>ref|XP_006480387.1| PREDICTED: uncharacterized protein LOC102611294 [Citrus sinensis]
Length = 1430
Score = 189 bits (481), Expect(2) = 9e-48
Identities = 86/110 (78%), Positives = 97/110 (88%)
Frame = +2
Query: 41 FHQIPVAPEDQEKTTFTCPFGTFAYRRMPFGLCNGPAMFQRCMVIIFSDFVENIIEVFMD 220
++QI +APEDQEKTTFTCPFGTFAYRRMPFGLCN PA FQRCM+ IFSD+VENIIEVFMD
Sbjct: 955 YNQIVIAPEDQEKTTFTCPFGTFAYRRMPFGLCNAPATFQRCMMSIFSDYVENIIEVFMD 1014
Query: 221 DFTVYSDSFDACLTNLTKEFKRCRETNFVLNYEKCHFMVDQGIILGHIVS 370
DFTVY DSFD CL NLT KRC +TN VLN+EK HFMV+QGI+LGH++S
Sbjct: 1015 DFTVYGDSFDKCLDNLTLVLKRCIDTNLVLNWEKYHFMVNQGIVLGHVIS 1064
Score = 26.6 bits (57), Expect(2) = 9e-48
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +3
Query: 3 GRSYYCCLDGYSGF 44
G S+YC L+GYSG+
Sbjct: 942 GHSHYCFLNGYSGY 955
>gb|AAL06412.1|AF378038_1 reverse transcriptase [Gossypium hirsutum]
Length = 241
Score = 187 bits (474), Expect(2) = 9e-48
Identities = 87/109 (79%), Positives = 94/109 (86%)
Frame = +2
Query: 47 QIPVAPEDQEKTTFTCPFGTFAYRRMPFGLCNGPAMFQRCMVIIFSDFVENIIEVFMDDF 226
QIPVAPEDQ+KTTFTCPFGTFAYRRM FGLCN PA FQRCMV IFSD+VE IIE FMDDF
Sbjct: 101 QIPVAPEDQDKTTFTCPFGTFAYRRMSFGLCNAPATFQRCMVSIFSDYVEKIIEFFMDDF 160
Query: 227 TVYSDSFDACLTNLTKEFKRCRETNFVLNYEKCHFMVDQGIILGHIVSS 373
TVY +SF+ CL NL K +RC E N VLNYEKCHFMVD+G+ILGHIVSS
Sbjct: 161 TVYGNSFNECLDNLAKILQRCLEFNLVLNYEKCHFMVDKGLILGHIVSS 209
Score = 29.3 bits (64), Expect(2) = 9e-48
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 6 RSYYCCLDGYSGFIK 50
+++YCCLDGYSG +
Sbjct: 87 KTHYCCLDGYSGLFQ 101
>ref|XP_006491718.1| PREDICTED: uncharacterized protein LOC102620785 [Citrus sinensis]
Length = 547
Score = 192 bits (488), Expect = 4e-47
Identities = 91/111 (81%), Positives = 96/111 (86%)
Frame = +2
Query: 41 FHQIPVAPEDQEKTTFTCPFGTFAYRRMPFGLCNGPAMFQRCMVIIFSDFVENIIEVFMD 220
FHQIPVAPEDQEKT FTCPFGTFAYRRM FGLCN P FQRCMV IFSD+VENIIEVFMD
Sbjct: 353 FHQIPVAPEDQEKTAFTCPFGTFAYRRMSFGLCNAPTTFQRCMVSIFSDYVENIIEVFMD 412
Query: 221 DFTVYSDSFDACLTNLTKEFKRCRETNFVLNYEKCHFMVDQGIILGHIVSS 373
DFTVY SFD CL N+ K +RC ETN VLNYEKCHFMVDQGIILGH+VS+
Sbjct: 413 DFTVY--SFDDCLYNMKKVLERCIETNLVLNYEKCHFMVDQGIILGHVVSA 461
>gb|AHN65357.1| reverse transcriptase [Glycine max]
Length = 198
Score = 181 bits (458), Expect(2) = 1e-45
Identities = 81/111 (72%), Positives = 92/111 (82%)
Frame = +2
Query: 41 FHQIPVAPEDQEKTTFTCPFGTFAYRRMPFGLCNGPAMFQRCMVIIFSDFVENIIEVFMD 220
+ QI +APEDQEKTTFTCPFGTF+YRRMPFGLCN P FQRCM+ IF DF+E IEVFMD
Sbjct: 20 YMQITIAPEDQEKTTFTCPFGTFSYRRMPFGLCNAPGTFQRCMISIFIDFLEICIEVFMD 79
Query: 221 DFTVYSDSFDACLTNLTKEFKRCRETNFVLNYEKCHFMVDQGIILGHIVSS 373
DFTVY SFD CL +L K RC ETN VLN+EKCHFMV+QGI+LGHI+S+
Sbjct: 80 DFTVYGSSFDGCLDSLEKVLNRCIETNLVLNFEKCHFMVEQGIVLGHIISN 130
Score = 28.5 bits (62), Expect(2) = 1e-45
Identities = 9/16 (56%), Positives = 15/16 (93%)
Frame = +3
Query: 3 GRSYYCCLDGYSGFIK 50
G+S+YC LDG+SG+++
Sbjct: 7 GKSHYCFLDGFSGYMQ 22
>ref|XP_004289020.1| PREDICTED: uncharacterized protein LOC101300186 [Fragaria vesca
subsp. vesca]
Length = 837
Score = 179 bits (453), Expect(2) = 3e-45
Identities = 82/111 (73%), Positives = 93/111 (83%)
Frame = +2
Query: 41 FHQIPVAPEDQEKTTFTCPFGTFAYRRMPFGLCNGPAMFQRCMVIIFSDFVENIIEVFMD 220
++QI VA EDQEKTTFTCPFGTFAYRRMPFGLCN PA FQRCM IFS+F+ ++IEVFMD
Sbjct: 516 YNQIRVAEEDQEKTTFTCPFGTFAYRRMPFGLCNAPATFQRCMYHIFSEFIGSMIEVFMD 575
Query: 221 DFTVYSDSFDACLTNLTKEFKRCRETNFVLNYEKCHFMVDQGIILGHIVSS 373
DF+VY FDACL N+ +RC ETN VLN+EKCHFMV QGI+LGHIVSS
Sbjct: 576 DFSVYGGDFDACLENVELVLRRCEETNLVLNWEKCHFMVTQGIVLGHIVSS 626
Score = 28.9 bits (63), Expect(2) = 3e-45
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 3 GRSYYCCLDGYSGF 44
G S+YC LDGYSG+
Sbjct: 503 GHSFYCFLDGYSGY 516
>ref|XP_004288740.1| PREDICTED: uncharacterized protein LOC101297673 [Fragaria vesca
subsp. vesca]
Length = 1058
Score = 179 bits (455), Expect(2) = 5e-45
Identities = 80/111 (72%), Positives = 95/111 (85%)
Frame = +2
Query: 41 FHQIPVAPEDQEKTTFTCPFGTFAYRRMPFGLCNGPAMFQRCMVIIFSDFVENIIEVFMD 220
++Q+ +A EDQEKTTFTCPFGTFAYRRMPFGLCN P FQRCM+ IFSD++ENIIEVFMD
Sbjct: 447 YNQMCIAQEDQEKTTFTCPFGTFAYRRMPFGLCNAPGTFQRCMMSIFSDYIENIIEVFMD 506
Query: 221 DFTVYSDSFDACLTNLTKEFKRCRETNFVLNYEKCHFMVDQGIILGHIVSS 373
DF+V+ +FD+CL NL KRC ETN VLN+EKCHFMV QGI+LGHI+S+
Sbjct: 507 DFSVFGKNFDSCLKNLELILKRCVETNLVLNWEKCHFMVTQGIVLGHIISA 557
Score = 27.3 bits (59), Expect(2) = 5e-45
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 3 GRSYYCCLDGYSGF 44
G +YC LDGYSG+
Sbjct: 434 GHEFYCFLDGYSGY 447
>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
Length = 1788
Score = 178 bits (451), Expect(2) = 1e-44
Identities = 76/111 (68%), Positives = 93/111 (83%)
Frame = +2
Query: 41 FHQIPVAPEDQEKTTFTCPFGTFAYRRMPFGLCNGPAMFQRCMVIIFSDFVENIIEVFMD 220
++QIP+APEDQEKTTFTCP+GTFAYRRMPFGLCN PA FQRCM+ IFSD VE +E+FMD
Sbjct: 947 YNQIPIAPEDQEKTTFTCPYGTFAYRRMPFGLCNAPATFQRCMISIFSDMVERFLEIFMD 1006
Query: 221 DFTVYSDSFDACLTNLTKEFKRCRETNFVLNYEKCHFMVDQGIILGHIVSS 373
DF+++ D+F CL +L +RCRE N LN+EKCHFMV QGI+LGH+VS+
Sbjct: 1007 DFSIFGDTFSQCLHHLKLVLERCREKNLTLNWEKCHFMVKQGIVLGHVVSN 1057
Score = 27.3 bits (59), Expect(2) = 1e-44
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 3 GRSYYCCLDGYSGF 44
G +YC LDGYSG+
Sbjct: 934 GHEFYCFLDGYSGY 947
>ref|XP_004289462.1| PREDICTED: uncharacterized protein LOC101311522 [Fragaria vesca
subsp. vesca]
Length = 1109
Score = 178 bits (451), Expect(2) = 2e-44
Identities = 77/111 (69%), Positives = 96/111 (86%)
Frame = +2
Query: 41 FHQIPVAPEDQEKTTFTCPFGTFAYRRMPFGLCNGPAMFQRCMVIIFSDFVENIIEVFMD 220
++QIP+APEDQEKTTFTCP+GTFAYRRMPFGLCN PA FQRCM+ IFSD VE IEVFMD
Sbjct: 492 YNQIPIAPEDQEKTTFTCPYGTFAYRRMPFGLCNAPATFQRCMITIFSDMVEKFIEVFMD 551
Query: 221 DFTVYSDSFDACLTNLTKEFKRCRETNFVLNYEKCHFMVDQGIILGHIVSS 373
DF+V+ DSF+ CL +L ++C E+N VLN+EKCHFMV++GI+LG++VS+
Sbjct: 552 DFSVFGDSFNQCLHHLELVLQKCEESNLVLNWEKCHFMVNEGIVLGYVVSA 602
Score = 26.6 bits (57), Expect(2) = 2e-44
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3
Query: 12 YYCCLDGYSGF 44
YYC LDGYSG+
Sbjct: 482 YYCFLDGYSGY 492
>gb|ACY01934.1| hypothetical protein [Beta vulgaris]
Length = 1717
Score = 183 bits (464), Expect = 2e-44
Identities = 78/110 (70%), Positives = 96/110 (87%)
Frame = +2
Query: 41 FHQIPVAPEDQEKTTFTCPFGTFAYRRMPFGLCNGPAMFQRCMVIIFSDFVENIIEVFMD 220
F QIP+ P+DQEKTTFTCP+GTFAYRRMPFGLCN PA FQRCM+ IFS+F+E+I+E+FMD
Sbjct: 988 FFQIPIHPDDQEKTTFTCPYGTFAYRRMPFGLCNAPATFQRCMMAIFSEFIESIMEIFMD 1047
Query: 221 DFTVYSDSFDACLTNLTKEFKRCRETNFVLNYEKCHFMVDQGIILGHIVS 370
DF+VY +FDACL NLTK KRC + + VLN+EKCHFMV +G++LGHI+S
Sbjct: 1048 DFSVYGINFDACLLNLTKVLKRCEDVHLVLNWEKCHFMVTEGVVLGHIIS 1097
>gb|AAL06403.1|AF378022_1 reverse transcriptase [Hordeum vulgare]
Length = 252
Score = 181 bits (459), Expect(2) = 5e-44
Identities = 81/110 (73%), Positives = 94/110 (85%)
Frame = +2
Query: 41 FHQIPVAPEDQEKTTFTCPFGTFAYRRMPFGLCNGPAMFQRCMVIIFSDFVENIIEVFMD 220
F QIPVA DQEKTTFTCPFGTFAYRRMPFGLCN PA FQRCM+ IFS+F ENI+EVFMD
Sbjct: 97 FSQIPVAQSDQEKTTFTCPFGTFAYRRMPFGLCNAPATFQRCMMAIFSNFCENIVEVFMD 156
Query: 221 DFTVYSDSFDACLTNLTKEFKRCRETNFVLNYEKCHFMVDQGIILGHIVS 370
DF+VY SFD CL+NL + +RC++TN VLN EKCHFMV++GI+LGH +S
Sbjct: 157 DFSVYGSSFDDCLSNLDRVLQRCKDTNLVLNGEKCHFMVNEGIVLGHKIS 206
Score = 22.3 bits (46), Expect(2) = 5e-44
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +3
Query: 9 SYYCCLDGYSGF 44
+++C LDGYS F
Sbjct: 86 THFCFLDGYSSF 97
>gb|ABG37658.1| integrase [Populus trichocarpa]
Length = 1139
Score = 181 bits (459), Expect = 9e-44
Identities = 82/111 (73%), Positives = 92/111 (82%)
Frame = +2
Query: 41 FHQIPVAPEDQEKTTFTCPFGTFAYRRMPFGLCNGPAMFQRCMVIIFSDFVENIIEVFMD 220
++QI +A EDQEKTTFTCPFGTFAYRRMPFGLCN PA FQRCM+ IFSD VE +E+FMD
Sbjct: 440 YNQIEIALEDQEKTTFTCPFGTFAYRRMPFGLCNAPATFQRCMLSIFSDMVERFLEIFMD 499
Query: 221 DFTVYSDSFDACLTNLTKEFKRCRETNFVLNYEKCHFMVDQGIILGHIVSS 373
DF+V+ DSFD CLTNL K RC E N VLN+EKCHFMV GI+LGHIVSS
Sbjct: 500 DFSVFGDSFDDCLTNLEKVLSRCEEKNLVLNWEKCHFMVTNGIVLGHIVSS 550
>pir||F85074 hypothetical protein AT4g07600 [imported] - Arabidopsis thaliana
gi|5724765|gb|AAD48069.1|AF160181_1 contains similarity
to Pfam family PF00078 -943 Reverse transcriptase
(RNA-dependent DNA polymerase); score 65.8, E=9.4e-16,
N=1; may be a pseudogene [Arabidopsis thaliana]
gi|7267357|emb|CAB81130.1| AT4g07600 [Arabidopsis
thaliana]
Length = 630
Score = 171 bits (432), Expect(2) = 2e-43
Identities = 75/110 (68%), Positives = 87/110 (79%)
Frame = +2
Query: 41 FHQIPVAPEDQEKTTFTCPFGTFAYRRMPFGLCNGPAMFQRCMVIIFSDFVENIIEVFMD 220
F QIP+ P D EKTTFTCP+GTFAY RMPFGLCN PA FQRCM IFSD +E ++EVFMD
Sbjct: 400 FFQIPIHPNDHEKTTFTCPYGTFAYERMPFGLCNAPATFQRCMTSIFSDIIEEMVEVFMD 459
Query: 221 DFTVYSDSFDACLTNLTKEFKRCRETNFVLNYEKCHFMVDQGIILGHIVS 370
DF+VY SF +CL NL + RC ETN VLN+EKCHFMV +GI+LGH +S
Sbjct: 460 DFSVYGPSFSSCLLNLGRVLTRCEETNLVLNWEKCHFMVKEGIMLGHKIS 509
Score = 30.8 bits (68), Expect(2) = 2e-43
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 12 YYCCLDGYSGFIKSQLH 62
YYC LDGYSGF + +H
Sbjct: 390 YYCFLDGYSGFFQIPIH 406
>gb|ABD63145.1| F7F22.17, putative [Asparagus officinalis]
Length = 680
Score = 174 bits (440), Expect(2) = 3e-43
Identities = 75/111 (67%), Positives = 92/111 (82%)
Frame = +2
Query: 41 FHQIPVAPEDQEKTTFTCPFGTFAYRRMPFGLCNGPAMFQRCMVIIFSDFVENIIEVFMD 220
++QIP+APEDQEKTTFTCP+GTFAYRRMPFGLCN PA FQR M+ IFSD VE +E+FMD
Sbjct: 252 YNQIPIAPEDQEKTTFTCPYGTFAYRRMPFGLCNAPATFQRYMISIFSDMVERFLEIFMD 311
Query: 221 DFTVYSDSFDACLTNLTKEFKRCRETNFVLNYEKCHFMVDQGIILGHIVSS 373
DF+++ D+F CL +L +RCRE N LN+EKCHFMV QGI+LGH+VS+
Sbjct: 312 DFSIFGDTFSQCLHHLKLVLERCREKNLTLNWEKCHFMVKQGIVLGHVVSN 362
Score = 27.3 bits (59), Expect(2) = 3e-43
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 3 GRSYYCCLDGYSGF 44
G +YC LDGYSG+
Sbjct: 239 GHEFYCFLDGYSGY 252
>gb|ABG37668.1| gag protein [Populus trichocarpa]
Length = 1886
Score = 179 bits (454), Expect = 4e-43
Identities = 80/111 (72%), Positives = 92/111 (82%)
Frame = +2
Query: 41 FHQIPVAPEDQEKTTFTCPFGTFAYRRMPFGLCNGPAMFQRCMVIIFSDFVENIIEVFMD 220
++QI +A EDQEKTTFTCPFGTFAYRRMPFGLCN PA FQRCM+ IFSD VE +E+FMD
Sbjct: 1185 YNQIEIALEDQEKTTFTCPFGTFAYRRMPFGLCNAPATFQRCMLSIFSDMVERFLEIFMD 1244
Query: 221 DFTVYSDSFDACLTNLTKEFKRCRETNFVLNYEKCHFMVDQGIILGHIVSS 373
DF+V+ DSFD CLTNL K RC E N +LN++KCHFMV GI+LGHIVSS
Sbjct: 1245 DFSVFGDSFDDCLTNLEKVLNRCEEKNLILNWKKCHFMVTNGIVLGHIVSS 1295
Score = 179 bits (454), Expect = 4e-43
Identities = 80/111 (72%), Positives = 92/111 (82%)
Frame = +2
Query: 41 FHQIPVAPEDQEKTTFTCPFGTFAYRRMPFGLCNGPAMFQRCMVIIFSDFVENIIEVFMD 220
++QI +A EDQEKTTFTCPFGTFAYRRMPFGLCN PA FQRCM+ IFSD VE +E+FMD
Sbjct: 1421 YNQIEIALEDQEKTTFTCPFGTFAYRRMPFGLCNAPATFQRCMLSIFSDMVERFLEIFMD 1480
Query: 221 DFTVYSDSFDACLTNLTKEFKRCRETNFVLNYEKCHFMVDQGIILGHIVSS 373
DF+V+ DSFD CLTNL K RC E N +LN++KCHFMV GI+LGHIVSS
Sbjct: 1481 DFSVFGDSFDDCLTNLEKVLNRCEEKNLILNWKKCHFMVTNGIVLGHIVSS 1531
>gb|ABG37657.1| integrase [Populus trichocarpa]
Length = 1738
Score = 179 bits (454), Expect = 4e-43
Identities = 80/111 (72%), Positives = 92/111 (82%)
Frame = +2
Query: 41 FHQIPVAPEDQEKTTFTCPFGTFAYRRMPFGLCNGPAMFQRCMVIIFSDFVENIIEVFMD 220
++QI +A EDQEKTTFTCPFGTFAYRRMPFGLCN PA FQRCM+ IFSD VE +E+FMD
Sbjct: 1037 YNQIEIALEDQEKTTFTCPFGTFAYRRMPFGLCNAPATFQRCMLSIFSDMVERFLEIFMD 1096
Query: 221 DFTVYSDSFDACLTNLTKEFKRCRETNFVLNYEKCHFMVDQGIILGHIVSS 373
DF+V+ DSFD CLTNL K RC E N +LN++KCHFMV GI+LGHIVSS
Sbjct: 1097 DFSVFGDSFDDCLTNLEKVLNRCEEKNLILNWKKCHFMVTNGIVLGHIVSS 1147
Score = 179 bits (454), Expect = 4e-43
Identities = 80/111 (72%), Positives = 92/111 (82%)
Frame = +2
Query: 41 FHQIPVAPEDQEKTTFTCPFGTFAYRRMPFGLCNGPAMFQRCMVIIFSDFVENIIEVFMD 220
++QI +A EDQEKTTFTCPFGTFAYRRMPFGLCN PA FQRCM+ IFSD VE +E+FMD
Sbjct: 1273 YNQIEIALEDQEKTTFTCPFGTFAYRRMPFGLCNAPATFQRCMLSIFSDMVERFLEIFMD 1332
Query: 221 DFTVYSDSFDACLTNLTKEFKRCRETNFVLNYEKCHFMVDQGIILGHIVSS 373
DF+V+ DSFD CLTNL K RC E N +LN++KCHFMV GI+LGHIVSS
Sbjct: 1333 DFSVFGDSFDDCLTNLEKVLNRCEEKNLILNWKKCHFMVTNGIVLGHIVSS 1383
>gb|AAF79809.1|AC020646_32 T32E20.9 [Arabidopsis thaliana]
Length = 1586
Score = 171 bits (433), Expect(2) = 8e-43
Identities = 75/110 (68%), Positives = 88/110 (80%)
Frame = +2
Query: 41 FHQIPVAPEDQEKTTFTCPFGTFAYRRMPFGLCNGPAMFQRCMVIIFSDFVENIIEVFMD 220
F QIP+ P DQ KTTFTCP+GTFAY+RMPFGLCN PA FQRCM IFSD +E ++EVFMD
Sbjct: 922 FFQIPIHPNDQGKTTFTCPYGTFAYKRMPFGLCNAPATFQRCMTSIFSDLIEEMVEVFMD 981
Query: 221 DFTVYSDSFDACLTNLTKEFKRCRETNFVLNYEKCHFMVDQGIILGHIVS 370
DF+VY SF +CL NL + KRC ETN VLN+EKCHFMV +GI+LG +S
Sbjct: 982 DFSVYGSSFSSCLLNLCRVLKRCEETNLVLNWEKCHFMVREGIVLGRKIS 1031
Score = 28.5 bits (62), Expect(2) = 8e-43
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 12 YYCCLDGYSGFIKSQLH 62
YYC LD YSGF + +H
Sbjct: 912 YYCFLDSYSGFFQIPIH 928
>gb|AAL06420.1|AF378078_1 reverse transcriptase [Arabidopsis thaliana]
Length = 254
Score = 177 bits (449), Expect = 1e-42
Identities = 78/107 (72%), Positives = 89/107 (83%)
Frame = +2
Query: 41 FHQIPVAPEDQEKTTFTCPFGTFAYRRMPFGLCNGPAMFQRCMVIIFSDFVENIIEVFMD 220
F QIP+ P DQEKTTFTCP GTFAYRRMPFGLCN PA FQRCM+ IFSD +EN++EV MD
Sbjct: 99 FFQIPIHPNDQEKTTFTCPCGTFAYRRMPFGLCNAPATFQRCMMSIFSDLIENVVEVLMD 158
Query: 221 DFTVYSDSFDACLTNLTKEFKRCRETNFVLNYEKCHFMVDQGIILGH 361
DF+VY DSF +CL+NL + KRC ETN VLN+EKCHFMV GI+LGH
Sbjct: 159 DFSVYGDSFASCLSNLCRVLKRCEETNLVLNWEKCHFMVRDGIVLGH 205
>gb|AAL06419.1|AF378075_1 reverse transcriptase [Arabidopsis thaliana]
Length = 254
Score = 177 bits (449), Expect = 1e-42
Identities = 78/107 (72%), Positives = 89/107 (83%)
Frame = +2
Query: 41 FHQIPVAPEDQEKTTFTCPFGTFAYRRMPFGLCNGPAMFQRCMVIIFSDFVENIIEVFMD 220
F QIP+ P DQEKTTFTCP GTFAYRRMPFGLCN PA FQRCM+ IFSD +EN++EV MD
Sbjct: 99 FFQIPIHPNDQEKTTFTCPCGTFAYRRMPFGLCNAPATFQRCMMSIFSDLIENVVEVLMD 158
Query: 221 DFTVYSDSFDACLTNLTKEFKRCRETNFVLNYEKCHFMVDQGIILGH 361
DF+VY DSF +CL+NL + KRC ETN VLN+EKCHFMV GI+LGH
Sbjct: 159 DFSVYGDSFASCLSNLCRVLKRCEETNLVLNWEKCHFMVRDGIVLGH 205