BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00054538
         (249 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containi...   109   4e-22
ref|XP_006476161.1| PREDICTED: pentatricopeptide repeat-containi...   108   6e-22
ref|XP_006450596.1| hypothetical protein CICLE_v10010742mg [Citr...   108   6e-22
gb|EXC32781.1| hypothetical protein L484_019895 [Morus notabilis]     108   1e-21
ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containi...   107   2e-21
emb|CBI20961.3| unnamed protein product [Vitis vinifera]              107   2e-21
ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containi...   107   2e-21
ref|XP_006360941.1| PREDICTED: pentatricopeptide repeat-containi...   107   2e-21
ref|XP_004247963.1| PREDICTED: pentatricopeptide repeat-containi...   105   8e-21
ref|XP_002324255.1| pentatricopeptide repeat-containing family p...   104   1e-20
ref|XP_007137157.1| hypothetical protein PHAVU_009G104600g [Phas...   102   4e-20
ref|XP_004292867.1| PREDICTED: pentatricopeptide repeat-containi...   102   4e-20
ref|XP_007227273.1| hypothetical protein PRUPE_ppa017736mg [Prun...   102   7e-20
ref|XP_003603587.1| Pentatricopeptide repeat-containing protein ...   100   3e-19
ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    95   9e-18
ref|XP_004501200.1| PREDICTED: pentatricopeptide repeat-containi...    94   2e-17
ref|XP_002884209.1| pentatricopeptide repeat-containing protein ...    93   4e-17
ref|XP_006408981.1| hypothetical protein EUTSA_v10001958mg [Eutr...    92   1e-16
ref|XP_006299486.1| hypothetical protein CARUB_v10015651mg [Caps...    91   2e-16
ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis th...    87   3e-15

>ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Vitis vinifera]
          Length = 541

 Score =  109 bits (272), Expect = 4e-22
 Identities = 48/81 (59%), Positives = 63/81 (77%)
 Frame = +2

Query: 2   LENQFVPLFGNCIKLIELKKIHAHIAKFSLSQSNFLVTKMIDICDAHGELEYAHQLFDQI 181
           +E+ FVP+  NC  ++ELKKIHAHI KFSLSQS+FLVTKM+D+C+ H E EYA+ LF ++
Sbjct: 13  MEDIFVPILKNCPNIVELKKIHAHIVKFSLSQSSFLVTKMVDVCNHHAETEYANLLFKRV 72

Query: 182 TQPNIFLYNSLLRALTHNHRY 244
             PN FLYN+++RA  HN  Y
Sbjct: 73  ADPNAFLYNAMIRAYKHNKVY 93


>ref|XP_006476161.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Citrus sinensis]
          Length = 541

 Score =  108 bits (271), Expect = 6e-22
 Identities = 49/81 (60%), Positives = 65/81 (80%)
 Frame = +2

Query: 2   LENQFVPLFGNCIKLIELKKIHAHIAKFSLSQSNFLVTKMIDICDAHGELEYAHQLFDQI 181
           LE++FVP+  +C  LIELKKIH  I K+ LSQSNFLVTKMID+C++ G+L YA  LF Q+
Sbjct: 13  LEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV 72

Query: 182 TQPNIFLYNSLLRALTHNHRY 244
            +PN+FLYN+++RA T+NH Y
Sbjct: 73  KEPNVFLYNAMIRAYTNNHLY 93


>ref|XP_006450596.1| hypothetical protein CICLE_v10010742mg [Citrus clementina]
           gi|557553822|gb|ESR63836.1| hypothetical protein
           CICLE_v10010742mg [Citrus clementina]
          Length = 605

 Score =  108 bits (271), Expect = 6e-22
 Identities = 49/81 (60%), Positives = 65/81 (80%)
 Frame = +2

Query: 2   LENQFVPLFGNCIKLIELKKIHAHIAKFSLSQSNFLVTKMIDICDAHGELEYAHQLFDQI 181
           LE++FVP+  +C  LIELKKIH  I K+ LSQSNFLVTKMID+C++ G+L YA  LF Q+
Sbjct: 13  LEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV 72

Query: 182 TQPNIFLYNSLLRALTHNHRY 244
            +PN+FLYN+++RA T+NH Y
Sbjct: 73  KEPNVFLYNAMIRAYTNNHLY 93


>gb|EXC32781.1| hypothetical protein L484_019895 [Morus notabilis]
          Length = 549

 Score =  108 bits (269), Expect = 1e-21
 Identities = 50/82 (60%), Positives = 63/82 (76%)
 Frame = +2

Query: 2   LENQFVPLFGNCIKLIELKKIHAHIAKFSLSQSNFLVTKMIDICDAHGELEYAHQLFDQI 181
           LEN F+P F NC  L  LKKIHA I KFSLSQSNFLVTKM+D+CD  G++EYA  LF Q+
Sbjct: 13  LENLFLPTFRNCTHLKTLKKIHALIVKFSLSQSNFLVTKMVDVCDKTGQVEYASLLFQQV 72

Query: 182 TQPNIFLYNSLLRALTHNHRYT 247
            Q N+FLYN++++A  +N RY+
Sbjct: 73  VQGNVFLYNAIIKAYANNSRYS 94


>ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Glycine max]
          Length = 535

 Score =  107 bits (267), Expect = 2e-21
 Identities = 47/81 (58%), Positives = 61/81 (75%)
 Frame = +2

Query: 2   LENQFVPLFGNCIKLIELKKIHAHIAKFSLSQSNFLVTKMIDICDAHGELEYAHQLFDQI 181
           LEN+FV    NC K+ ELKKIHAHI K SLSQSNFLVTKM+D+CD    ++YA  +F Q+
Sbjct: 6   LENRFVTTLRNCPKIAELKKIHAHIVKLSLSQSNFLVTKMLDLCDNLSHVDYATMIFQQL 65

Query: 182 TQPNIFLYNSLLRALTHNHRY 244
             PN+F YN+++R  THNH++
Sbjct: 66  ENPNVFSYNAIIRTYTHNHKH 86


>emb|CBI20961.3| unnamed protein product [Vitis vinifera]
          Length = 553

 Score =  107 bits (267), Expect = 2e-21
 Identities = 47/81 (58%), Positives = 63/81 (77%)
 Frame = +2

Query: 2   LENQFVPLFGNCIKLIELKKIHAHIAKFSLSQSNFLVTKMIDICDAHGELEYAHQLFDQI 181
           +E+ FVP+  +C  ++ELKKIHAHI KFSLSQS+FLVTKM+D+C+ +GE EYA+ LF  +
Sbjct: 58  MEDMFVPILKDCPNIVELKKIHAHIVKFSLSQSSFLVTKMVDVCNHYGETEYANLLFKGV 117

Query: 182 TQPNIFLYNSLLRALTHNHRY 244
             PN FLYN+++RA  HN  Y
Sbjct: 118 ADPNAFLYNAMIRAYKHNKVY 138


>ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
           [Vitis vinifera]
          Length = 537

 Score =  107 bits (267), Expect = 2e-21
 Identities = 47/81 (58%), Positives = 63/81 (77%)
 Frame = +2

Query: 2   LENQFVPLFGNCIKLIELKKIHAHIAKFSLSQSNFLVTKMIDICDAHGELEYAHQLFDQI 181
           +E+ FVP+  +C  ++ELKKIHAHI KFSLSQS+FLVTKM+D+C+ +GE EYA+ LF  +
Sbjct: 13  MEDMFVPILKDCPNIVELKKIHAHIVKFSLSQSSFLVTKMVDVCNHYGETEYANLLFKGV 72

Query: 182 TQPNIFLYNSLLRALTHNHRY 244
             PN FLYN+++RA  HN  Y
Sbjct: 73  ADPNAFLYNAMIRAYKHNKVY 93


>ref|XP_006360941.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Solanum tuberosum]
          Length = 536

 Score =  107 bits (266), Expect = 2e-21
 Identities = 48/81 (59%), Positives = 62/81 (76%)
 Frame = +2

Query: 2   LENQFVPLFGNCIKLIELKKIHAHIAKFSLSQSNFLVTKMIDICDAHGELEYAHQLFDQI 181
           LE+ F+P+  NC   + LKKIHA I KFSLSQS++LVTKM++ICD +GE+EYA  LF Q+
Sbjct: 13  LEDMFIPVLKNCKSTVFLKKIHAQIVKFSLSQSSYLVTKMVEICDKNGEIEYAKLLFKQV 72

Query: 182 TQPNIFLYNSLLRALTHNHRY 244
             PN +LYNS++RA TH  RY
Sbjct: 73  EDPNNYLYNSIIRAYTHKQRY 93


>ref|XP_004247963.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Solanum lycopersicum]
          Length = 534

 Score =  105 bits (261), Expect = 8e-21
 Identities = 48/81 (59%), Positives = 62/81 (76%)
 Frame = +2

Query: 2   LENQFVPLFGNCIKLIELKKIHAHIAKFSLSQSNFLVTKMIDICDAHGELEYAHQLFDQI 181
           LE+ F+ +  NC   I LKKIHA I KFSL+QS++LVTKM++ICD  GE+EYA+ LF Q+
Sbjct: 11  LEDMFIAVLKNCKSSIFLKKIHAQIVKFSLTQSSYLVTKMVEICDKIGEIEYANLLFKQV 70

Query: 182 TQPNIFLYNSLLRALTHNHRY 244
             PN +LYNS++RA TH HRY
Sbjct: 71  EHPNNYLYNSIIRAYTHKHRY 91


>ref|XP_002324255.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222865689|gb|EEF02820.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 547

 Score =  104 bits (259), Expect = 1e-20
 Identities = 47/81 (58%), Positives = 62/81 (76%)
 Frame = +2

Query: 2   LENQFVPLFGNCIKLIELKKIHAHIAKFSLSQSNFLVTKMIDICDAHGELEYAHQLFDQI 181
           LEN FVP+  NC  ++ELK IHAH+ K+SLSQS+FLVTKM+D+CD   +L YA  LF Q+
Sbjct: 13  LENFFVPILQNCKNIVELKSIHAHVIKYSLSQSSFLVTKMVDVCDKTEDLGYASLLFKQV 72

Query: 182 TQPNIFLYNSLLRALTHNHRY 244
            +PN +LYN+++RA THN  Y
Sbjct: 73  KEPNGYLYNAMIRAHTHNKVY 93


>ref|XP_007137157.1| hypothetical protein PHAVU_009G104600g [Phaseolus vulgaris]
           gi|561010244|gb|ESW09151.1| hypothetical protein
           PHAVU_009G104600g [Phaseolus vulgaris]
          Length = 527

 Score =  102 bits (255), Expect = 4e-20
 Identities = 44/82 (53%), Positives = 60/82 (73%)
 Frame = +2

Query: 2   LENQFVPLFGNCIKLIELKKIHAHIAKFSLSQSNFLVTKMIDICDAHGELEYAHQLFDQI 181
           LEN+FV     C K+ ELKK+HAHI K SLSQSNFL TKM+D+CD  G ++YA  +F  +
Sbjct: 6   LENRFVTTLRTCSKISELKKLHAHIVKLSLSQSNFLATKMLDLCDNLGHVDYATLIFQNL 65

Query: 182 TQPNIFLYNSLLRALTHNHRYT 247
             PN+F YN+++R  THNH+++
Sbjct: 66  EDPNVFSYNAIIRTCTHNHKHS 87


>ref|XP_004292867.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Fragaria vesca subsp. vesca]
          Length = 544

 Score =  102 bits (255), Expect = 4e-20
 Identities = 48/81 (59%), Positives = 59/81 (72%)
 Frame = +2

Query: 2   LENQFVPLFGNCIKLIELKKIHAHIAKFSLSQSNFLVTKMIDICDAHGELEYAHQLFDQI 181
           LEN FVP   NC     LKKIHA I K SLSQSNFLVTKM+D+CD  G + YA  LF Q+
Sbjct: 13  LENSFVPKLLNCKTKPGLKKIHAQIVKLSLSQSNFLVTKMVDVCDYSGNVNYASLLFKQV 72

Query: 182 TQPNIFLYNSLLRALTHNHRY 244
            +PN+FL+N+++RA THN+ Y
Sbjct: 73  LEPNVFLFNAMIRAYTHNYVY 93


>ref|XP_007227273.1| hypothetical protein PRUPE_ppa017736mg [Prunus persica]
           gi|462424209|gb|EMJ28472.1| hypothetical protein
           PRUPE_ppa017736mg [Prunus persica]
          Length = 544

 Score =  102 bits (253), Expect = 7e-20
 Identities = 48/81 (59%), Positives = 59/81 (72%)
 Frame = +2

Query: 2   LENQFVPLFGNCIKLIELKKIHAHIAKFSLSQSNFLVTKMIDICDAHGELEYAHQLFDQI 181
           LE+ FVP   NC     LKKIHA I KFSLSQSNFLVTKM+D+CD  G L YA  LF Q+
Sbjct: 13  LEDFFVPTLLNCKNTSGLKKIHAQIVKFSLSQSNFLVTKMVDVCDNSGNLGYASLLFKQV 72

Query: 182 TQPNIFLYNSLLRALTHNHRY 244
            +PN+FL+N+++RA TH+  Y
Sbjct: 73  LEPNVFLFNAMIRAYTHHQMY 93


>ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355492635|gb|AES73838.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 568

 Score =  100 bits (248), Expect = 3e-19
 Identities = 44/82 (53%), Positives = 58/82 (70%)
 Frame = +2

Query: 2   LENQFVPLFGNCIKLIELKKIHAHIAKFSLSQSNFLVTKMIDICDAHGELEYAHQLFDQI 181
           LEN+++    NC K+ +LKKIHAH+ K SLSQSNFLVTKM+D CD  G + YA  LF Q+
Sbjct: 9   LENRYITSLKNCFKITQLKKIHAHVVKLSLSQSNFLVTKMLDSCDNLGHVSYATLLFKQL 68

Query: 182 TQPNIFLYNSLLRALTHNHRYT 247
             PNIF YN+++R   HN  ++
Sbjct: 69  LHPNIFTYNAIIRTYAHNRHHS 90


>ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g20540-like [Vitis vinifera]
          Length = 515

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 41/67 (61%), Positives = 54/67 (80%)
 Frame = +2

Query: 44  LIELKKIHAHIAKFSLSQSNFLVTKMIDICDAHGELEYAHQLFDQITQPNIFLYNSLLRA 223
           ++ELKKIHAH+ KFSLS S+FLVTKM+D+C+ HGE EYA+ LF ++  PN FLYN+++RA
Sbjct: 1   MVELKKIHAHVVKFSLSXSSFLVTKMVDMCNHHGETEYANLLFKRVADPNAFLYNAMIRA 60

Query: 224 LTHNHRY 244
             HN  Y
Sbjct: 61  YKHNKVY 67


>ref|XP_004501200.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like isoform X1 [Cicer arietinum]
           gi|502132029|ref|XP_004501201.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g20540-like isoform X2 [Cicer arietinum]
           gi|502132032|ref|XP_004501202.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g20540-like isoform X3 [Cicer arietinum]
           gi|502132034|ref|XP_004501203.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g20540-like isoform X4 [Cicer arietinum]
          Length = 553

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 42/82 (51%), Positives = 57/82 (69%)
 Frame = +2

Query: 2   LENQFVPLFGNCIKLIELKKIHAHIAKFSLSQSNFLVTKMIDICDAHGELEYAHQLFDQI 181
           LEN++V    +C ++ +LKKIHAH+ K SLSQSNFL TKM+D CD  G + YA  LF Q+
Sbjct: 9   LENRYVASLKSCFRIAQLKKIHAHVVKLSLSQSNFLATKMLDSCDNMGYVGYATLLFQQL 68

Query: 182 TQPNIFLYNSLLRALTHNHRYT 247
             PN F YN+++R  THN  ++
Sbjct: 69  LHPNNFSYNAIIRTYTHNRHHS 90


>ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330049|gb|EFH60468.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 534

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 42/81 (51%), Positives = 58/81 (71%)
 Frame = +2

Query: 2   LENQFVPLFGNCIKLIELKKIHAHIAKFSLSQSNFLVTKMIDICDAHGELEYAHQLFDQI 181
           +EN F+P         E KKIHA I    LSQS+F+VTKM+D+CD  G+++YA +LF+Q+
Sbjct: 9   VENYFIPFLQRVKSRNEWKKIHACIIVHGLSQSSFMVTKMVDLCDKLGDMDYATRLFNQV 68

Query: 182 TQPNIFLYNSLLRALTHNHRY 244
           + PN+FLYNS++RA THN  Y
Sbjct: 69  SNPNVFLYNSIIRAYTHNSLY 89


>ref|XP_006408981.1| hypothetical protein EUTSA_v10001958mg [Eutrema salsugineum]
           gi|557110137|gb|ESQ50434.1| hypothetical protein
           EUTSA_v10001958mg [Eutrema salsugineum]
          Length = 531

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 44/81 (54%), Positives = 55/81 (67%)
 Frame = +2

Query: 2   LENQFVPLFGNCIKLIELKKIHAHIAKFSLSQSNFLVTKMIDICDAHGELEYAHQLFDQI 181
           LEN FVP       L E KKIHA I    LSQS+F+VTKM+D+CD  G++E A +LF Q+
Sbjct: 9   LENYFVPFLQRFKSLGEWKKIHASIIVHGLSQSSFMVTKMVDVCDKIGDMECATRLFKQV 68

Query: 182 TQPNIFLYNSLLRALTHNHRY 244
             PN+FLYNS++RA  HN  Y
Sbjct: 69  ANPNVFLYNSIIRAYAHNSLY 89


>ref|XP_006299486.1| hypothetical protein CARUB_v10015651mg [Capsella rubella]
           gi|482568195|gb|EOA32384.1| hypothetical protein
           CARUB_v10015651mg [Capsella rubella]
          Length = 534

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 44/81 (54%), Positives = 58/81 (71%)
 Frame = +2

Query: 2   LENQFVPLFGNCIKLIELKKIHAHIAKFSLSQSNFLVTKMIDICDAHGELEYAHQLFDQI 181
           +EN FV L        ELKKIHA I    LSQS+F+VTKM+D CD  G++EYA +LF+Q+
Sbjct: 9   VENCFVSLLQRFRSRNELKKIHASIIIHGLSQSSFMVTKMVDSCDKIGDMEYATRLFNQV 68

Query: 182 TQPNIFLYNSLLRALTHNHRY 244
           + PN+FLYNS++RA TH+  Y
Sbjct: 69  SYPNVFLYNSIIRAYTHHSLY 89


>ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
           gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g20540 gi|4586036|gb|AAD25654.1| unknown protein
           [Arabidopsis thaliana] gi|67633530|gb|AAY78689.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana] gi|330251931|gb|AEC07025.1| mitochondrial
           editing factor 21 [Arabidopsis thaliana]
          Length = 534

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 40/81 (49%), Positives = 56/81 (69%)
 Frame = +2

Query: 2   LENQFVPLFGNCIKLIELKKIHAHIAKFSLSQSNFLVTKMIDICDAHGELEYAHQLFDQI 181
           +EN F+P         E KKI+A I    LSQS+F+VTKM+D CD   +++YA +LF+Q+
Sbjct: 9   VENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQV 68

Query: 182 TQPNIFLYNSLLRALTHNHRY 244
           + PN+FLYNS++RA THN  Y
Sbjct: 69  SNPNVFLYNSIIRAYTHNSLY 89