BLASTX nr result
ID: Cocculus23_contig00054467
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00054467
(449 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADZ45599.1| coat protein, partial [Passion fruit woodiness vi... 58 1e-06
gb|ABL09394.1| polyprotein [Bean common mosaic virus strain pean... 57 2e-06
gb|AFV41121.1| coat protein, partial [Zucchini yellow mosaic virus] 57 3e-06
emb|CAD12310.1| polyprotein [Zucchini yellow mosaic virus] 57 3e-06
emb|CAD12308.1| polyprotein [Zucchini yellow mosaic virus] gi|18... 57 3e-06
emb|CAD12309.1| polyprotein [Zucchini yellow mosaic virus] 57 3e-06
dbj|BAA00596.1| polyprotein precursor [Zucchini yellow mosaic vi... 57 3e-06
emb|CAA44529.1| ZYMV-S coat protein [Zucchini yellow mosaic virus] 57 3e-06
dbj|BAB82974.1| coat protein [Zucchini yellow mosaic virus] gi|2... 57 3e-06
sp|O36979.2|POLG_ZYMVS RecName: Full=Genome polyprotein; Contain... 57 3e-06
emb|CAD12314.1| polyprotein [Zucchini yellow mosaic virus] gi|29... 57 3e-06
gb|AGT95936.1| polyprotein [Zucchini yellow mosaic virus] gi|532... 57 3e-06
gb|AGT95935.1| polyprotein [Zucchini yellow mosaic virus] 57 3e-06
gb|AGT95934.1| polyprotein [Zucchini yellow mosaic virus] 57 3e-06
gb|AGT95932.1| polyprotein [Zucchini yellow mosaic virus] gi|532... 57 3e-06
gb|AFO53512.1| polyprotein, partial [Zucchini yellow mosaic virus] 57 3e-06
gb|AAD44688.1| polyprotein [Zucchini yellow mosaic virus] 57 3e-06
gb|AAO12999.1| coat protein, partial [Zucchini yellow mosaic virus] 57 3e-06
gb|AAA48511.1| coat protein (cp), partial [Zucchini yellow mosai... 57 3e-06
gb|AAZ14976.1| polyprotein [Passiflora foetida virus Y] 57 3e-06
>gb|ADZ45599.1| coat protein, partial [Passion fruit woodiness virus]
Length = 279
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = +3
Query: 342 NFLWV*KLT*NKQIEYPLKPMVENAKPTLRQIMHHF 449
N +WV + N+Q+EYPLKPMVENAKPTLRQIMHHF
Sbjct: 140 NGVWV-MMDGNEQVEYPLKPMVENAKPTLRQIMHHF 174
>gb|ABL09394.1| polyprotein [Bean common mosaic virus strain peanut stripe]
Length = 486
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +3
Query: 342 NFLWV*KLT*NKQIEYPLKPMVENAKPTLRQIMHHF 449
N WV + N+Q+EYPLKPMVENAKPTLRQIMHHF
Sbjct: 347 NGTWV-MMDGNEQVEYPLKPMVENAKPTLRQIMHHF 381
>gb|AFV41121.1| coat protein, partial [Zucchini yellow mosaic virus]
Length = 279
Score = 57.0 bits (136), Expect = 3e-06
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +3
Query: 342 NFLWV*KLT*NKQIEYPLKPMVENAKPTLRQIMHHF 449
N +WV + N+Q+EYPLKP+VENAKPTLRQIMHHF
Sbjct: 140 NGIWV-MMDGNEQVEYPLKPIVENAKPTLRQIMHHF 174
>emb|CAD12310.1| polyprotein [Zucchini yellow mosaic virus]
Length = 310
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +3
Query: 342 NFLWV*KLT*NKQIEYPLKPMVENAKPTLRQIMHHF 449
N +WV + N+Q+EYPLKP+VENAKPTLRQIMHHF
Sbjct: 171 NGVWV-MMDGNEQVEYPLKPIVENAKPTLRQIMHHF 205
>emb|CAD12308.1| polyprotein [Zucchini yellow mosaic virus]
gi|18644000|emb|CAD12311.1| polyprotein [Zucchini yellow
mosaic virus] gi|18644002|emb|CAD12312.1| polyprotein
[Zucchini yellow mosaic virus]
gi|18644004|emb|CAD12313.1| polyprotein [Zucchini yellow
mosaic virus]
Length = 312
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +3
Query: 342 NFLWV*KLT*NKQIEYPLKPMVENAKPTLRQIMHHF 449
N +WV + N+Q+EYPLKP+VENAKPTLRQIMHHF
Sbjct: 173 NGVWV-MMDGNEQVEYPLKPIVENAKPTLRQIMHHF 207
>emb|CAD12309.1| polyprotein [Zucchini yellow mosaic virus]
Length = 311
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +3
Query: 342 NFLWV*KLT*NKQIEYPLKPMVENAKPTLRQIMHHF 449
N +WV + N+Q+EYPLKP+VENAKPTLRQIMHHF
Sbjct: 172 NGVWV-MMDGNEQVEYPLKPIVENAKPTLRQIMHHF 206
>dbj|BAA00596.1| polyprotein precursor [Zucchini yellow mosaic virus]
Length = 444
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +3
Query: 342 NFLWV*KLT*NKQIEYPLKPMVENAKPTLRQIMHHF 449
N +WV + N+Q+EYPLKP+VENAKPTLRQIMHHF
Sbjct: 305 NGVWV-MMDGNEQVEYPLKPIVENAKPTLRQIMHHF 339
>emb|CAA44529.1| ZYMV-S coat protein [Zucchini yellow mosaic virus]
Length = 345
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +3
Query: 342 NFLWV*KLT*NKQIEYPLKPMVENAKPTLRQIMHHF 449
N +WV + N+Q+EYPLKP+VENAKPTLRQIMHHF
Sbjct: 206 NGVWV-MMDGNEQVEYPLKPIVENAKPTLRQIMHHF 240
>dbj|BAB82974.1| coat protein [Zucchini yellow mosaic virus]
gi|224589241|gb|ACN59468.1| polyprotein [Zucchini yellow
mosaic virus] gi|239938034|gb|ACS36116.1| polyprotein
[Zucchini yellow mosaic virus]
gi|255994907|dbj|BAH97116.1| coat protein [Zucchini
yellow mosaic virus] gi|255994910|dbj|BAH97118.1| coat
protein [Zucchini yellow mosaic virus]
gi|291191486|gb|ADD82934.1| coat protein [Zucchini
yellow mosaic virus] gi|341940094|gb|AEL12187.1| coat
protein [Zucchini yellow mosaic virus]
gi|351001356|gb|AEQ38880.1| coat protein [Zucchini
yellow mosaic virus] gi|351001360|gb|AEQ38882.1| coat
protein [Zucchini yellow mosaic virus]
gi|351001362|gb|AEQ38883.1| coat protein [Zucchini
yellow mosaic virus] gi|351001364|gb|AEQ38884.1| coat
protein [Zucchini yellow mosaic virus]
gi|409729188|gb|AFV41122.1| coat protein, partial
[Zucchini yellow mosaic virus]
gi|409729194|gb|AFV41125.1| coat protein, partial
[Zucchini yellow mosaic virus]
gi|409729202|gb|AFV41129.1| coat protein, partial
[Zucchini yellow mosaic virus]
Length = 279
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +3
Query: 342 NFLWV*KLT*NKQIEYPLKPMVENAKPTLRQIMHHF 449
N +WV + N+Q+EYPLKP+VENAKPTLRQIMHHF
Sbjct: 140 NGVWV-MMDGNEQVEYPLKPIVENAKPTLRQIMHHF 174
>sp|O36979.2|POLG_ZYMVS RecName: Full=Genome polyprotein; Contains: RecName: Full=P1
proteinase; AltName: Full=N-terminal protein; Contains:
RecName: Full=Helper component proteinase; Short=HC-pro;
Contains: RecName: Full=Protein P3; Contains: RecName:
Full=6 kDa protein 1; Short=6K1; Contains: RecName:
Full=Cytoplasmic inclusion protein; Short=CI; Contains:
RecName: Full=6 kDa protein 2; Short=6K2; Contains:
RecName: Full=Viral genome-linked protein; AltName:
Full=VPg; Contains: RecName: Full=Nuclear inclusion
protein A; Short=NI-a; Short=NIa; AltName: Full=49 kDa
proteinase; Short=49 kDa-Pro; AltName: Full=NIa-pro;
Contains: RecName: Full=Nuclear inclusion protein B;
Short=NI-b; Short=NIb; AltName: Full=RNA-directed RNA
polymerase; Contains: RecName: Full=Capsid protein;
Short=CP; AltName: Full=Coat protein
gi|13940782|gb|AAB72004.2| polyprotein [Zucchini yellow
mosaic virus]
Length = 3083
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +3
Query: 342 NFLWV*KLT*NKQIEYPLKPMVENAKPTLRQIMHHF 449
N +WV + N+Q+EYPLKP+VENAKPTLRQIMHHF
Sbjct: 2944 NGVWV-MMDGNEQVEYPLKPIVENAKPTLRQIMHHF 2978
>emb|CAD12314.1| polyprotein [Zucchini yellow mosaic virus]
gi|297499300|gb|ADI43277.1| polyprotein, partial
[Zucchini yellow mosaic virus]
Length = 308
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +3
Query: 342 NFLWV*KLT*NKQIEYPLKPMVENAKPTLRQIMHHF 449
N +WV + N+Q+EYPLKP+VENAKPTLRQIMHHF
Sbjct: 169 NGVWV-MMDGNEQVEYPLKPIVENAKPTLRQIMHHF 203
>gb|AGT95936.1| polyprotein [Zucchini yellow mosaic virus]
gi|532235182|gb|AGT95937.1| polyprotein [Zucchini yellow
mosaic virus] gi|532235184|gb|AGT95938.1| polyprotein
[Zucchini yellow mosaic virus]
gi|532235188|gb|AGT95940.1| polyprotein [Zucchini yellow
mosaic virus]
Length = 3080
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +3
Query: 342 NFLWV*KLT*NKQIEYPLKPMVENAKPTLRQIMHHF 449
N +WV + N+Q+EYPLKP+VENAKPTLRQIMHHF
Sbjct: 2941 NGVWV-MMDGNEQVEYPLKPIVENAKPTLRQIMHHF 2975
>gb|AGT95935.1| polyprotein [Zucchini yellow mosaic virus]
Length = 3080
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +3
Query: 342 NFLWV*KLT*NKQIEYPLKPMVENAKPTLRQIMHHF 449
N +WV + N+Q+EYPLKP+VENAKPTLRQIMHHF
Sbjct: 2941 NGVWV-MMDGNEQVEYPLKPIVENAKPTLRQIMHHF 2975
>gb|AGT95934.1| polyprotein [Zucchini yellow mosaic virus]
Length = 3080
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +3
Query: 342 NFLWV*KLT*NKQIEYPLKPMVENAKPTLRQIMHHF 449
N +WV + N+Q+EYPLKP+VENAKPTLRQIMHHF
Sbjct: 2941 NGVWV-MMDGNEQVEYPLKPIVENAKPTLRQIMHHF 2975
>gb|AGT95932.1| polyprotein [Zucchini yellow mosaic virus]
gi|532235174|gb|AGT95933.1| polyprotein [Zucchini yellow
mosaic virus] gi|532235186|gb|AGT95939.1| polyprotein
[Zucchini yellow mosaic virus]
Length = 3080
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +3
Query: 342 NFLWV*KLT*NKQIEYPLKPMVENAKPTLRQIMHHF 449
N +WV + N+Q+EYPLKP+VENAKPTLRQIMHHF
Sbjct: 2941 NGVWV-MMDGNEQVEYPLKPIVENAKPTLRQIMHHF 2975
>gb|AFO53512.1| polyprotein, partial [Zucchini yellow mosaic virus]
Length = 289
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +3
Query: 342 NFLWV*KLT*NKQIEYPLKPMVENAKPTLRQIMHHF 449
N +WV + N+Q+EYPLKP+VENAKPTLRQIMHHF
Sbjct: 150 NGVWV-MMDGNEQVEYPLKPIVENAKPTLRQIMHHF 184
>gb|AAD44688.1| polyprotein [Zucchini yellow mosaic virus]
Length = 295
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +3
Query: 342 NFLWV*KLT*NKQIEYPLKPMVENAKPTLRQIMHHF 449
N +WV + N+Q+EYPLKP+VENAKPTLRQIMHHF
Sbjct: 156 NGVWV-MMDGNEQVEYPLKPIVENAKPTLRQIMHHF 190
>gb|AAO12999.1| coat protein, partial [Zucchini yellow mosaic virus]
Length = 151
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +3
Query: 342 NFLWV*KLT*NKQIEYPLKPMVENAKPTLRQIMHHF 449
N +WV + N+Q+EYPLKP+VENAKPTLRQIMHHF
Sbjct: 12 NGVWV-MMDGNEQVEYPLKPIVENAKPTLRQIMHHF 46
>gb|AAA48511.1| coat protein (cp), partial [Zucchini yellow mosaic virus]
Length = 387
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +3
Query: 342 NFLWV*KLT*NKQIEYPLKPMVENAKPTLRQIMHHF 449
N +WV + N+Q+EYPLKP+VENAKPTLRQIMHHF
Sbjct: 248 NGVWV-MMDGNEQVEYPLKPIVENAKPTLRQIMHHF 282
>gb|AAZ14976.1| polyprotein [Passiflora foetida virus Y]
Length = 455
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = +3
Query: 342 NFLWV*KLT*NKQIEYPLKPMVENAKPTLRQIMHHF 449
N +WV + ++QIEYPLKPMVENAKPTLRQIMHHF
Sbjct: 316 NGVWV-MMDGDEQIEYPLKPMVENAKPTLRQIMHHF 350