BLASTX nr result
ID: Cocculus23_contig00054321
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00054321
(291 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-17
ref|XP_006576934.1| PREDICTED: pentatricopeptide repeat-containi... 94 3e-17
ref|XP_006576933.1| PREDICTED: pentatricopeptide repeat-containi... 94 3e-17
ref|XP_006576931.1| PREDICTED: pentatricopeptide repeat-containi... 94 3e-17
ref|XP_003520593.1| PREDICTED: pentatricopeptide repeat-containi... 94 3e-17
ref|XP_007162523.1| hypothetical protein PHAVU_001G159100g [Phas... 90 3e-16
ref|XP_006390316.1| hypothetical protein EUTSA_v10018358mg [Eutr... 63 4e-08
gb|EYU23732.1| hypothetical protein MIMGU_mgv1a024961mg [Mimulus... 63 5e-08
ref|XP_004502948.1| PREDICTED: pentatricopeptide repeat-containi... 62 6e-08
ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containi... 62 6e-08
ref|XP_006304009.1| hypothetical protein CARUB_v10011460mg [Caps... 62 1e-07
ref|XP_002889587.1| pentatricopeptide repeat-containing protein ... 61 1e-07
dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group] gi|2080... 60 4e-07
dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Grou... 60 4e-07
gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japo... 60 4e-07
ref|XP_006644243.1| PREDICTED: putative pentatricopeptide repeat... 59 5e-07
ref|XP_006644241.1| PREDICTED: putative pentatricopeptide repeat... 59 5e-07
ref|XP_006643626.1| PREDICTED: putative pentatricopeptide repeat... 59 5e-07
ref|XP_006827023.1| hypothetical protein AMTR_s00010p00221030 [A... 59 9e-07
ref|XP_006472722.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
>ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product
[Vitis vinifera]
Length = 688
Score = 94.0 bits (232), Expect = 2e-17
Identities = 47/88 (53%), Positives = 63/88 (71%)
Frame = +1
Query: 28 PAISLQSPTKTLSSLFKFTKSLALTKQLHAHLIFYGLHLSVLFGSKICKAYVDLGSLDSA 207
P IS ++PTKTL SLF+FTK+LA QL+A ++ LH S+LFG I AY+ LGSL A
Sbjct: 7 PPISSRNPTKTLLSLFRFTKTLASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVA 66
Query: 208 LKAFDQITFKNLRSWNTIISGYTTSSRF 291
KAF+ ITF+NL SWNTI++ ++ + F
Sbjct: 67 SKAFNHITFENLHSWNTILASHSKNKCF 94
>ref|XP_006576934.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial-like isoform X6 [Glycine max]
Length = 222
Score = 93.6 bits (231), Expect = 3e-17
Identities = 47/89 (52%), Positives = 58/89 (65%)
Frame = +1
Query: 25 APAISLQSPTKTLSSLFKFTKSLALTKQLHAHLIFYGLHLSVLFGSKICKAYVDLGSLDS 204
AP IS Q+P +TL + F K L+ +QLHA +I GLH V +GS I Y+ GSL
Sbjct: 4 APTISSQNPLETLRAFFSCAKILSSAQQLHAQVIINGLHKKVFYGSNITNVYIQSGSLPL 63
Query: 205 ALKAFDQITFKNLRSWNTIISGYTTSSRF 291
A KAFDQI+ KNL SWNTIISGY+ S +
Sbjct: 64 AKKAFDQISVKNLHSWNTIISGYSKRSLY 92
>ref|XP_006576933.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial-like isoform X5 [Glycine max]
Length = 376
Score = 93.6 bits (231), Expect = 3e-17
Identities = 47/89 (52%), Positives = 58/89 (65%)
Frame = +1
Query: 25 APAISLQSPTKTLSSLFKFTKSLALTKQLHAHLIFYGLHLSVLFGSKICKAYVDLGSLDS 204
AP IS Q+P +TL + F K L+ +QLHA +I GLH V +GS I Y+ GSL
Sbjct: 4 APTISSQNPLETLRAFFSCAKILSSAQQLHAQVIINGLHKKVFYGSNITNVYIQSGSLPL 63
Query: 205 ALKAFDQITFKNLRSWNTIISGYTTSSRF 291
A KAFDQI+ KNL SWNTIISGY+ S +
Sbjct: 64 AKKAFDQISVKNLHSWNTIISGYSKRSLY 92
>ref|XP_006576931.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial-like isoform X3 [Glycine max]
Length = 516
Score = 93.6 bits (231), Expect = 3e-17
Identities = 47/89 (52%), Positives = 58/89 (65%)
Frame = +1
Query: 25 APAISLQSPTKTLSSLFKFTKSLALTKQLHAHLIFYGLHLSVLFGSKICKAYVDLGSLDS 204
AP IS Q+P +TL + F K L+ +QLHA +I GLH V +GS I Y+ GSL
Sbjct: 4 APTISSQNPLETLRAFFSCAKILSSAQQLHAQVIINGLHKKVFYGSNITNVYIQSGSLPL 63
Query: 205 ALKAFDQITFKNLRSWNTIISGYTTSSRF 291
A KAFDQI+ KNL SWNTIISGY+ S +
Sbjct: 64 AKKAFDQISVKNLHSWNTIISGYSKRSLY 92
>ref|XP_003520593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial-like isoform X1 [Glycine max]
Length = 599
Score = 93.6 bits (231), Expect = 3e-17
Identities = 47/89 (52%), Positives = 58/89 (65%)
Frame = +1
Query: 25 APAISLQSPTKTLSSLFKFTKSLALTKQLHAHLIFYGLHLSVLFGSKICKAYVDLGSLDS 204
AP IS Q+P +TL + F K L+ +QLHA +I GLH V +GS I Y+ GSL
Sbjct: 4 APTISSQNPLETLRAFFSCAKILSSAQQLHAQVIINGLHKKVFYGSNITNVYIQSGSLPL 63
Query: 205 ALKAFDQITFKNLRSWNTIISGYTTSSRF 291
A KAFDQI+ KNL SWNTIISGY+ S +
Sbjct: 64 AKKAFDQISVKNLHSWNTIISGYSKRSLY 92
>ref|XP_007162523.1| hypothetical protein PHAVU_001G159100g [Phaseolus vulgaris]
gi|561035987|gb|ESW34517.1| hypothetical protein
PHAVU_001G159100g [Phaseolus vulgaris]
Length = 596
Score = 90.1 bits (222), Expect = 3e-16
Identities = 47/84 (55%), Positives = 56/84 (66%)
Frame = +1
Query: 25 APAISLQSPTKTLSSLFKFTKSLALTKQLHAHLIFYGLHLSVLFGSKICKAYVDLGSLDS 204
AP I +P KT ++L K L+L +QLHA +I GL+ V +GS I AYV GSL
Sbjct: 4 APLILSSNPFKTFNALLSCPKFLSLAQQLHAQVIINGLYREVFYGSNITNAYVQSGSLPL 63
Query: 205 ALKAFDQITFKNLRSWNTIISGYT 276
A KAFDQIT KNL SWNTIISGY+
Sbjct: 64 ATKAFDQITGKNLHSWNTIISGYS 87
>ref|XP_006390316.1| hypothetical protein EUTSA_v10018358mg [Eutrema salsugineum]
gi|557086750|gb|ESQ27602.1| hypothetical protein
EUTSA_v10018358mg [Eutrema salsugineum]
Length = 556
Score = 63.2 bits (152), Expect = 4e-08
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = +1
Query: 55 KTLSSLFKFTKSLALTKQLHAHLIFYGLHLSVLFGSKICKAYVDLGSLDSALKAFDQITF 234
K L S+ TKSL T+Q+HA +I +G V+ GS + AY+ LD A +FD+I
Sbjct: 8 KALLSILSQTKSLHHTQQVHAKVIVHGFQEEVVLGSSVTNAYIQSHRLDFATASFDRIPS 67
Query: 235 --KNLRSWNTIISGYTTSSRF 291
+N SWNTI+SGY+ S +
Sbjct: 68 WNRNRYSWNTILSGYSKSKSY 88
>gb|EYU23732.1| hypothetical protein MIMGU_mgv1a024961mg [Mimulus guttatus]
Length = 534
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/70 (41%), Positives = 42/70 (60%)
Frame = +1
Query: 82 TKSLALTKQLHAHLIFYGLHLSVLFGSKICKAYVDLGSLDSALKAFDQITFKNLRSWNTI 261
TK+L L + LH+HLI + F +++ + Y S+D A K FD +T KN SWNT+
Sbjct: 17 TKNLKLGRSLHSHLIKTAFIIDTFFTNRLMQIYSRCNSIDDAQKTFDDLTSKNAHSWNTM 76
Query: 262 ISGYTTSSRF 291
IS Y+ + RF
Sbjct: 77 ISAYSETGRF 86
>ref|XP_004502948.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cicer arietinum]
Length = 599
Score = 62.4 bits (150), Expect = 6e-08
Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Frame = +1
Query: 46 SPTKTLSSLFK---FTKSLALTKQLHAHLIFYGLHLSVLFGSKICKAYVDLGSLDSALKA 216
S + LSSL TKSL L K LH+HLI L V +K+ Y G ++S KA
Sbjct: 24 STIENLSSLISKCVTTKSLKLGKALHSHLIKTALFFDVFLANKLIDVYSKCGCIESTHKA 83
Query: 217 FDQITFKNLRSWNTIISGYTTSSRF 291
FD I K RSWNT++S Y+ + F
Sbjct: 84 FDDIPNKTTRSWNTLLSFYSKTGSF 108
>ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Vitis vinifera]
Length = 573
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Frame = +1
Query: 67 SLFKFTKSLAL--TKQLHAHLIFYGLHLSVLFGSKICKAYVDLGSLDSALKAFDQITFKN 240
SL ++LAL T Q+H+HL+ G H +L G+ + AY G LDSA + FD+I ++
Sbjct: 106 SLIASARALALSETSQIHSHLLRRGCHADILLGTTLIDAYAKCGDLDSAQRVFDEIPLRD 165
Query: 241 LRSWNTIISGYTTSSR 288
+ +WN +I+G S+
Sbjct: 166 VAAWNALIAGLAQGSK 181
>ref|XP_006304009.1| hypothetical protein CARUB_v10011460mg [Capsella rubella]
gi|482572720|gb|EOA36907.1| hypothetical protein
CARUB_v10011460mg [Capsella rubella]
Length = 557
Score = 61.6 bits (148), Expect = 1e-07
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Frame = +1
Query: 52 TKTLSSLFKFTKSLALTKQLHAHLIFYGLHLSVLFGSKICKAYVDLGSLDSALKAFDQIT 231
TK L S+ K+L T+Q+HA +I +G V+ GS + AY+ LD A +FD+I
Sbjct: 7 TKALLSILSQVKTLHHTQQVHAKVIVHGFQDEVVLGSSVTNAYIQSNRLDFATASFDRIP 66
Query: 232 F--KNLRSWNTIISGYTTS 282
+N SWNTI+SGY+ S
Sbjct: 67 CWKRNRYSWNTILSGYSKS 85
>ref|XP_002889587.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297335429|gb|EFH65846.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 558
Score = 61.2 bits (147), Expect = 1e-07
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +1
Query: 55 KTLSSLFKFTKSLALTKQLHAHLIFYGLHLSVLFGSKICKAYVDLGSLDSALKAFDQITF 234
+ L S+ TK+L T+Q+HA +I +G V+ GS + AY+ LD A +FD+I
Sbjct: 8 RALLSILSQTKTLHHTQQVHAKVIIHGFQDEVVLGSSLTNAYIQSNRLDFATASFDRIPC 67
Query: 235 --KNLRSWNTIISGYTTS 282
+N SWNTI+SGY+ S
Sbjct: 68 WKRNRHSWNTILSGYSKS 85
>dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa
Japonica Group]
Length = 1122
Score = 59.7 bits (143), Expect = 4e-07
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Frame = +1
Query: 40 LQSPTKTLSSLFKFTKSLA---LTKQLHAHLIFYGLHLSVLFGSKICKAYVDLGSLDSAL 210
L+ T SS+ K + SLA L +QLH++LI G SV GS + Y G LD AL
Sbjct: 434 LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEAL 493
Query: 211 KAFDQITFKNLRSWNTIISGY 273
+ FD++ +N SWN +IS Y
Sbjct: 494 RTFDEMPERNSISWNAVISAY 514
>dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein
OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 59.7 bits (143), Expect = 4e-07
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Frame = +1
Query: 40 LQSPTKTLSSLFKFTKSLA---LTKQLHAHLIFYGLHLSVLFGSKICKAYVDLGSLDSAL 210
L+ T SS+ K + SLA L +QLH++LI G SV GS + Y G LD AL
Sbjct: 434 LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEAL 493
Query: 211 KAFDQITFKNLRSWNTIISGY 273
+ FD++ +N SWN +IS Y
Sbjct: 494 RTFDEMPERNSISWNAVISAY 514
>gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 59.7 bits (143), Expect = 4e-07
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Frame = +1
Query: 40 LQSPTKTLSSLFKFTKSLA---LTKQLHAHLIFYGLHLSVLFGSKICKAYVDLGSLDSAL 210
L+ T SS+ K + SLA L +QLH++LI G SV GS + Y G LD AL
Sbjct: 632 LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEAL 691
Query: 211 KAFDQITFKNLRSWNTIISGY 273
+ FD++ +N SWN +IS Y
Sbjct: 692 RTFDEMPERNSISWNAVISAY 712
>ref|XP_006644243.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like isoform X3 [Oryza brachyantha]
Length = 514
Score = 59.3 bits (142), Expect = 5e-07
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Frame = +1
Query: 40 LQSPTKTLSSLFKFTKSLA---LTKQLHAHLIFYGLHLSVLFGSKICKAYVDLGSLDSAL 210
L+ T SS+ K + SL L +QLH++LI G S+ GS + Y GSLD AL
Sbjct: 138 LRPDRATFSSIIKASSSLTMMGLGRQLHSYLIRSGHKSSIFCGSALVDMYAKCGSLDEAL 197
Query: 211 KAFDQITFKNLRSWNTIISGY 273
+ FD++ +N SWN +IS Y
Sbjct: 198 RTFDEMPERNSISWNAVISAY 218
>ref|XP_006644241.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like isoform X1 [Oryza brachyantha]
gi|573913107|ref|XP_006644242.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At2g01510-like isoform X2 [Oryza brachyantha]
Length = 543
Score = 59.3 bits (142), Expect = 5e-07
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Frame = +1
Query: 40 LQSPTKTLSSLFKFTKSLA---LTKQLHAHLIFYGLHLSVLFGSKICKAYVDLGSLDSAL 210
L+ T SS+ K + SL L +QLH++LI G S+ GS + Y GSLD AL
Sbjct: 167 LRPDRATFSSIIKASSSLTMMGLGRQLHSYLIRSGHKSSIFCGSALVDMYAKCGSLDEAL 226
Query: 211 KAFDQITFKNLRSWNTIISGY 273
+ FD++ +N SWN +IS Y
Sbjct: 227 RTFDEMPERNSISWNAVISAY 247
>ref|XP_006643626.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Oryza brachyantha]
Length = 543
Score = 59.3 bits (142), Expect = 5e-07
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Frame = +1
Query: 40 LQSPTKTLSSLFKFTKSLA---LTKQLHAHLIFYGLHLSVLFGSKICKAYVDLGSLDSAL 210
L+ T SS+ K + SL L +QLH++LI G S+ GS + Y GSLD AL
Sbjct: 167 LRPDRATFSSIIKASSSLTMIGLGRQLHSYLIRSGHKSSIFSGSALVDMYAKCGSLDEAL 226
Query: 211 KAFDQITFKNLRSWNTIISGY 273
+ FD++ +N SWN +IS Y
Sbjct: 227 RTFDEMPERNSISWNAVISAY 247
>ref|XP_006827023.1| hypothetical protein AMTR_s00010p00221030 [Amborella trichopoda]
gi|548831452|gb|ERM94260.1| hypothetical protein
AMTR_s00010p00221030 [Amborella trichopoda]
Length = 645
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/70 (40%), Positives = 39/70 (55%)
Frame = +1
Query: 82 TKSLALTKQLHAHLIFYGLHLSVLFGSKICKAYVDLGSLDSALKAFDQITFKNLRSWNTI 261
T++ K +HAH+ +GLH S + + Y GSL S+ K FD++ KN SWNTI
Sbjct: 24 TRNPTSPKSIHAHITKHGLHASAFLTNLLINLYSKCGSLSSSQKLFDEMLQKNTSSWNTI 83
Query: 262 ISGYTTSSRF 291
IS Y + F
Sbjct: 84 ISAYAKAGDF 93
>ref|XP_006472722.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Citrus sinensis]
Length = 692
Score = 58.2 bits (139), Expect = 1e-06
Identities = 26/68 (38%), Positives = 40/68 (58%)
Frame = +1
Query: 85 KSLALTKQLHAHLIFYGLHLSVLFGSKICKAYVDLGSLDSALKAFDQITFKNLRSWNTII 264
+S+ K LH +I YGL + G+ + Y D SL+ A K FD++ KN+ SW T++
Sbjct: 17 RSIKQGKSLHCRIIKYGLSQDIFTGNNLLSMYADFTSLNDAHKLFDEMARKNIVSWTTMV 76
Query: 265 SGYTTSSR 288
+ YT+S R
Sbjct: 77 TAYTSSKR 84