BLASTX nr result

ID: Cocculus23_contig00054198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00054198
         (242 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA29096.1| putative MYB transcription factor [Rosa rugosa]        57   3e-06

>emb|CCA29096.1| putative MYB transcription factor [Rosa rugosa]
          Length = 343

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/70 (47%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
 Frame = -3

Query: 237 SYTPDENSSTAASSDSLGTQVSMVSDFTECCNGLQVENTSTSGVG-----ANTQIGHGGY 73
           SYT  ENSSTAASSDS GTQVS VS+ T+  + + V N   S        A       GY
Sbjct: 219 SYTTPENSSTAASSDSFGTQVSPVSELTDYYSNMSVNNNKPSSQALDYFQATNPHHQVGY 278

Query: 72  QECLTSPYGY 43
            + +TSP GY
Sbjct: 279 HDSMTSPSGY 288


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