BLASTX nr result
ID: Cocculus23_contig00054170
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00054170
(520 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN76612.1| hypothetical protein VITISV_040104 [Vitis vinifera] 91 2e-16
emb|CAN82579.1| hypothetical protein VITISV_007813 [Vitis vinifera] 85 9e-15
emb|CAN60569.1| hypothetical protein VITISV_000226 [Vitis vinifera] 83 4e-14
gb|AAK29467.1| polyprotein-like [Solanum chilense] 83 4e-14
ref|XP_007038204.1| Transducin/WD40 repeat-like superfamily prot... 79 8e-13
gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subc... 77 2e-12
gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subc... 77 3e-12
gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subc... 77 3e-12
emb|CAN60557.1| hypothetical protein VITISV_035871 [Vitis vinifera] 74 2e-11
ref|XP_006580798.1| PREDICTED: uncharacterized protein LOC102667... 74 2e-11
ref|XP_007217476.1| hypothetical protein PRUPE_ppb024813mg [Prun... 74 2e-11
ref|XP_004239883.1| PREDICTED: uncharacterized protein LOC101266... 74 2e-11
ref|XP_007028624.1| Uncharacterized protein TCM_024518 [Theobrom... 74 3e-11
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 74 3e-11
gb|ABA94368.2| retrotransposon protein, putative, Ty1-copia subc... 74 3e-11
emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group] 74 3e-11
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 71 2e-10
emb|CAN63293.1| hypothetical protein VITISV_025722 [Vitis vinifera] 70 3e-10
ref|XP_003627075.1| Receptor-like protein kinase [Medicago trunc... 70 4e-10
ref|XP_006494373.1| PREDICTED: F-box protein At2g21930-like [Cit... 69 5e-10
>emb|CAN76612.1| hypothetical protein VITISV_040104 [Vitis vinifera]
Length = 127
Score = 90.9 bits (224), Expect = 2e-16
Identities = 43/90 (47%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Frame = -3
Query: 341 FNIEKYDGKSNFSMWQVRMEDVLVQLGLVVAIEGK-PTGMTNNKWNEINRKATSMIRLCL 165
F++ K+DG NF +WQ R++D+LVQ G+V A+ GK P GM N W ++ K + IRLCL
Sbjct: 9 FDVVKFDGFGNFDLWQRRVKDLLVQQGMVKALYGKQPEGMNNMDWKDLEVKVAATIRLCL 68
Query: 164 TDDVAYNVLRDTSAFDMWKKLEDIYMGKIL 75
DDV Y+V+ + S +W KLE YM K+L
Sbjct: 69 ADDVMYHVMDEESPTAIWLKLESQYMSKLL 98
>emb|CAN82579.1| hypothetical protein VITISV_007813 [Vitis vinifera]
Length = 726
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = -3
Query: 329 KYDGKSNFSMWQVRMEDVLVQLGLVVAIEGKPT-GMTNNKWNEINRKATSMIRLCLTDDV 153
K+DG NF +WQ R++D+LVQ G+V + GK GM N W ++ K +MI+LCL DDV
Sbjct: 3 KFDGSGNFGLWQRRIKDLLVQQGMVKVLYGKQLDGMNNMDWKDLXAKTAAMIKLCLVDDV 62
Query: 152 AYNVLRDTSAFDMWKKLEDIYMGKIL 75
Y+V+ + S +W KLE YM K L
Sbjct: 63 MYHVMDEESLTTIWLKLESRYMSKXL 88
>emb|CAN60569.1| hypothetical protein VITISV_000226 [Vitis vinifera]
Length = 105
Score = 82.8 bits (203), Expect = 4e-14
Identities = 39/90 (43%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Frame = -3
Query: 341 FNIEKYDGKSNFSMWQVRMEDVLVQLGLVVAI-EGKPTGMTNNKWNEINRKATSMIRLCL 165
F++ K++G NF +WQ R++D+LVQ G+V A+ E +P GM + W ++ K + IRLCL
Sbjct: 9 FDVVKFNGSGNFGLWQRRVKDLLVQQGMVKALYEKQPEGMDDMDWKDLEAKVEATIRLCL 68
Query: 164 TDDVAYNVLRDTSAFDMWKKLEDIYMGKIL 75
DDV Y+V+ + S +W KLE YM L
Sbjct: 69 VDDVMYHVMDEESPTTIWLKLESRYMSMSL 98
>gb|AAK29467.1| polyprotein-like [Solanum chilense]
Length = 1328
Score = 82.8 bits (203), Expect = 4e-14
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 4/93 (4%)
Frame = -3
Query: 341 FNIEKYDG-KSNFSMWQVRMEDVLVQLGLVVAIEGK---PTGMTNNKWNEINRKATSMIR 174
+ + K++G K FSMWQ RM+D+L+Q GL A+ GK P M W E++ KA S IR
Sbjct: 6 YEVAKFNGDKPVFSMWQRRMKDLLIQQGLHKALGGKSKKPESMKLEDWEELDEKAASAIR 65
Query: 173 LCLTDDVAYNVLRDTSAFDMWKKLEDIYMGKIL 75
L LTDDV N++ + SA +W KLE++YM K L
Sbjct: 66 LHLTDDVVNNIVDEESACGIWTKLENLYMSKTL 98
>ref|XP_007038204.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
gi|508775449|gb|EOY22705.1| Transducin/WD40 repeat-like
superfamily protein [Theobroma cacao]
Length = 1029
Score = 78.6 bits (192), Expect = 8e-13
Identities = 43/107 (40%), Positives = 73/107 (68%), Gaps = 3/107 (2%)
Frame = -3
Query: 386 NENNLMASTSMELKLFNIEKYDGKSNFSMWQVRMEDVLVQLGLVVAIEGK---PTGMTNN 216
N N MA++S + + IEK++G+++FS+W+V+M +LVQ GL+ A++GK P+ +++
Sbjct: 118 NLNLAMATSSTK---YEIEKFNGRNDFSLWRVKMRALLVQQGLLKALKGKEHLPSNLSDG 174
Query: 215 KWNEINRKATSMIRLCLTDDVAYNVLRDTSAFDMWKKLEDIYMGKIL 75
+ +++ +KA S+I L L+D+V V + SA +W KLE IYM K L
Sbjct: 175 EKDDLMKKAHSVILLALSDEVLREVTDEESAAAVWFKLESIYMTKSL 221
>gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 415
Score = 77.4 bits (189), Expect = 2e-12
Identities = 39/100 (39%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Frame = -3
Query: 371 MASTSMELKLFNIEKYDGKSNFSMWQVRMEDVLVQLGLVVAI-EGKPTGMTNNKWNEINR 195
MA+T++ F + K+DG NF +WQ+R++D+L Q G+ A+ E P + +KWNE+
Sbjct: 1 MAATAVSK--FEVVKFDGTGNFVLWQMRLKDLLAQQGISKALQETMPEKIDADKWNEMKA 58
Query: 194 KATSMIRLCLTDDVAYNVLRDTSAFDMWKKLEDIYMGKIL 75
+A + IRL L+D V Y V+ + S ++W KL ++M K L
Sbjct: 59 QAAATIRLSLSDSVMYQVMDEKSPKEIWDKLASLHMSKSL 98
>gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 424
Score = 76.6 bits (187), Expect = 3e-12
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Frame = -3
Query: 341 FNIEKYDGKSNFSMWQVRMEDVLVQLGLVVAIEGK-PTGMTNNKWNEINRKATSMIRLCL 165
F + K+DG NF +WQ+R++D+L Q G+ A+E P M KW E+ +A + IRL L
Sbjct: 9 FEVVKFDGTGNFVLWQMRLKDLLAQQGISKALEETMPEKMDAGKWEEMKAQAAATIRLSL 68
Query: 164 TDDVAYNVLRDTSAFDMWKKLEDIYMGKIL 75
+D V Y V+ + ++ ++W KL +YM K L
Sbjct: 69 SDSVMYQVMDEKTSKEIWVKLTSLYMSKSL 98
>gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 425
Score = 76.6 bits (187), Expect = 3e-12
Identities = 37/96 (38%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Frame = -3
Query: 359 SMELKLFNIEKYDGKSNFSMWQVRMEDVLVQLGLVVAIEGK-PTGMTNNKWNEINRKATS 183
+M + F + K+DG NF +WQ+R++D+L Q G+ A+E P M KW E+ +A +
Sbjct: 3 AMVVSKFEVVKFDGTGNFILWQMRLKDLLAQQGISKALEETMPEKMDAGKWEEMKAQAAA 62
Query: 182 MIRLCLTDDVAYNVLRDTSAFDMWKKLEDIYMGKIL 75
IRL L+D V Y V+ + + ++W KL +YM K L
Sbjct: 63 TIRLSLSDSVMYPVMDEKTPKEIWDKLASLYMSKSL 98
>emb|CAN60557.1| hypothetical protein VITISV_035871 [Vitis vinifera]
Length = 110
Score = 74.3 bits (181), Expect = 2e-11
Identities = 41/93 (44%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
Frame = -3
Query: 341 FNIEKYDGKSNFSMWQVRMEDVLVQLGLVVAIEGK---PTGMTNNKWNEINRKATSMIRL 171
F+IEK+ GKS+F +W+V+M+ +LVQ GL A++G+ P ++ + N+I KA S I L
Sbjct: 6 FDIEKFSGKSDFGLWRVKMKALLVQQGLQDALKGEKDIPKTLSEKEKNDILEKAQSAIIL 65
Query: 170 CLTDDVAYNVLRDTSAFDMWKKLEDIYMGKILA 72
L D V ++TSA +W KLE +YM K LA
Sbjct: 66 SLGDKALREVSKETSAAAIWLKLEKLYMTKSLA 98
>ref|XP_006580798.1| PREDICTED: uncharacterized protein LOC102667348 [Glycine max]
Length = 393
Score = 73.9 bits (180), Expect = 2e-11
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = -3
Query: 341 FNIEKYDGKSNFSMWQVRMEDVLVQLGLVVAIEG-KPTGMTNNKWNEINRKATSMIRLCL 165
F I +DGK NF +WQ ++D+LVQ GL A+E + + +W +I R SMIRL L
Sbjct: 8 FKIPLFDGKINFMIWQSIIQDLLVQQGLDQALEDERAISINETEWTKIQRMTVSMIRLAL 67
Query: 164 TDDVAYNVLRDTSAFDMWKKLEDIYMGK 81
+ +N+L++T++ +W+KLE+IY K
Sbjct: 68 ALGIKHNMLKETTSKALWEKLENIYASK 95
>ref|XP_007217476.1| hypothetical protein PRUPE_ppb024813mg [Prunus persica]
gi|462413626|gb|EMJ18675.1| hypothetical protein
PRUPE_ppb024813mg [Prunus persica]
Length = 113
Score = 73.9 bits (180), Expect = 2e-11
Identities = 35/89 (39%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Frame = -3
Query: 335 IEKYDGKSNFSMWQVRMEDVLVQLGLVVAIEG-KPTGMTNNKWNEINRKATSMIRLCLTD 159
I+ +DGK +F+ WQ M+++L+Q L A+ G KP MT+ W ++ +KA S I + LT
Sbjct: 9 IKPFDGKDDFTDWQKMMKNILLQQDLDDALNGEKPANMTDAVWTKVLKKAKSSIEIRLTR 68
Query: 158 DVAYNVLRDTSAFDMWKKLEDIYMGKILA 72
V ++ +A++ WKKLE++YMGK ++
Sbjct: 69 SVQSHITEKMTAYEAWKKLENVYMGKTVS 97
>ref|XP_004239883.1| PREDICTED: uncharacterized protein LOC101266031 [Solanum
lycopersicum]
Length = 221
Score = 73.9 bits (180), Expect = 2e-11
Identities = 36/94 (38%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Frame = -3
Query: 356 MELKLFNIEKYDGKSNFSMWQVRMEDVLVQLGLVVAIEG-KPTGMTNNKWNEINRKATSM 180
M L+LF+I K+D K++F++W+++M VLVQ L + G KP M ++W EI+ +A S+
Sbjct: 1 MSLRLFDIGKFDRKTSFTLWKIKMHAVLVQNSLHKPLTGEKPIDMKADQWKEIDEQARSL 60
Query: 179 IRLCLTDDVAYNVLRDTSAFDMWKKLEDIYMGKI 78
I L L D++ V+ + +A +W KLE +++ I
Sbjct: 61 IYLYLADEILRQVIEEKTAKQVWDKLEALHLENI 94
>ref|XP_007028624.1| Uncharacterized protein TCM_024518 [Theobroma cacao]
gi|508717229|gb|EOY09126.1| Uncharacterized protein
TCM_024518 [Theobroma cacao]
Length = 277
Score = 73.6 bits (179), Expect = 3e-11
Identities = 41/102 (40%), Positives = 70/102 (68%), Gaps = 3/102 (2%)
Frame = -3
Query: 371 MASTSMELKLFNIEKYDGKSNFSMWQVRMEDVLVQLGLVVAIEGK---PTGMTNNKWNEI 201
MA++S + + IEK++G+++FS+W+V+M +LVQ GL+ A++GK P+ +++++ +++
Sbjct: 1 MATSSTK---YEIEKFNGRNDFSLWRVKMCALLVQQGLLKALKGKEHLPSNLSDSEKDDL 57
Query: 200 NRKATSMIRLCLTDDVAYNVLRDTSAFDMWKKLEDIYMGKIL 75
KA S I L L+D+V V + SA MW KLE IY+ K L
Sbjct: 58 MEKAHSAILLTLSDEVLREVTDEESAAAMWFKLESIYITKSL 99
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 73.6 bits (179), Expect = 3e-11
Identities = 35/92 (38%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Frame = -3
Query: 341 FNIEKYDGKSNFSMWQVRMEDVLVQLGLVVAIE---GKPTGMTNNKWNEINRKATSMIRL 171
+ + K++G + FS WQ RM D+L+Q GL ++ KP M W +++ +A S IRL
Sbjct: 6 YEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAASAIRL 65
Query: 170 CLTDDVAYNVLRDTSAFDMWKKLEDIYMGKIL 75
L+DDV N++ + +A +W +LE +YM K L
Sbjct: 66 HLSDDVVNNIIDEDTARGIWTRLESLYMSKTL 97
>gb|ABA94368.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 375
Score = 73.6 bits (179), Expect = 3e-11
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Frame = -3
Query: 341 FNIEKYDGKSNFSMWQVRMEDVLVQLGLVVAIEGK-PTGMTNNKWNEINRKATSMIRLCL 165
F + K+DG NF + Q+R++D+L Q G+ A+E P M ++KW+E+ +A + IRL L
Sbjct: 9 FEVVKFDGTRNFVLSQMRLKDLLAQQGISKALEETMPEKMDDDKWDEMKAQAAATIRLRL 68
Query: 164 TDDVAYNVLRDTSAFDMWKKLEDIYMGKILAK 69
+D V Y V+ + S ++W KL +YM K L K
Sbjct: 69 SDFVMYQVMDEKSPKEIWDKLASLYMSKSLTK 100
>emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group]
Length = 478
Score = 73.6 bits (179), Expect = 3e-11
Identities = 38/100 (38%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Frame = -3
Query: 371 MASTSMELKLFNIEKYDGKSNFSMWQVRMEDVLVQLGLVVAIEG-KPTGMTNNKWNEINR 195
+A T M+ F++ K+DG NF +WQ R++D+L Q + A++G KP M ++ E+
Sbjct: 83 LAPTCMK---FDLVKFDGFGNFGLWQTRVKDLLAQQEVSKALKGVKPAKMEDDDCEEMQL 139
Query: 194 KATSMIRLCLTDDVAYNVLRDTSAFDMWKKLEDIYMGKIL 75
+A + IR CL+D + Y+V+ +TS +W+KLE +M K L
Sbjct: 140 QAAATIRRCLSDQIMYHVMEETSPKIIWEKLEAQFMSKTL 179
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 70.9 bits (172), Expect = 2e-10
Identities = 38/109 (34%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Frame = -3
Query: 392 VSNENNLMASTSMELKLFNIEKYDGKSNFSMWQVRMEDVLVQLGLVVAIEGK---PTGMT 222
+ N N + M + F +EK++G ++F++W+++M+ +LVQ AIEG+ P G+T
Sbjct: 396 MKNFQNEICRRKMSSQKFEVEKFNGSNDFTLWKLKMKALLVQQKCAQAIEGEEKLPVGLT 455
Query: 221 NNKWNEINRKATSMIRLCLTDDVAYNVLRDTSAFDMWKKLEDIYMGKIL 75
+ E+ +A S I L L D+V V +T+A +W+KLE Y K L
Sbjct: 456 AAEKEEVVSRAHSAILLSLADEVLREVADETTAVGLWRKLESKYQKKSL 504
>emb|CAN63293.1| hypothetical protein VITISV_025722 [Vitis vinifera]
Length = 347
Score = 70.1 bits (170), Expect = 3e-10
Identities = 31/68 (45%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = -3
Query: 341 FNIEKYDGKSNFSMWQVRMEDVLVQLGLVVAIEGK-PTGMTNNKWNEINRKATSMIRLCL 165
F++ K+DG NFS+W R++D+LVQ G+V A+ GK P GM + W ++ K + IRLCL
Sbjct: 9 FDVVKFDGSGNFSLWHRRVKDLLVQQGMVKALYGKQPEGMNDIDWKDLEAKVAATIRLCL 68
Query: 164 TDDVAYNV 141
+DV Y++
Sbjct: 69 ANDVMYHM 76
>ref|XP_003627075.1| Receptor-like protein kinase [Medicago truncatula]
gi|355521097|gb|AET01551.1| Receptor-like protein kinase
[Medicago truncatula]
Length = 1215
Score = 69.7 bits (169), Expect = 4e-10
Identities = 37/93 (39%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
Frame = -3
Query: 341 FNIEKYDGKSNFSMWQVRMEDVLVQLGLVVAIEGK---PTGMTNNKWNEINRKATSMIRL 171
++IEK+ G ++F +W+V+M++VL+Q A++G+ P MT + EI KA S+I +
Sbjct: 5 WDIEKFIGINDFGLWKVKMQEVLIQQKCEKALKGEGALPVTMTQAEKTEIVDKARSVIVM 64
Query: 170 CLTDDVAYNVLRDTSAFDMWKKLEDIYMGKILA 72
CL D V +V ++ + MW KLE +YM K LA
Sbjct: 65 CLGDKVLRDVAKEPTVASMWSKLETLYMTKSLA 97
>ref|XP_006494373.1| PREDICTED: F-box protein At2g21930-like [Citrus sinensis]
Length = 623
Score = 69.3 bits (168), Expect = 5e-10
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 11/108 (10%)
Frame = -3
Query: 362 TSMELKLFNIEKYDGKSNFSMWQVRMEDVLVQLGLVVAIE-----------GKPTGMTNN 216
TSM N+EK+ ++NF+MW+V+ME +L+ GL A+E + +T
Sbjct: 401 TSMTASKINLEKFTRQNNFNMWKVKMEALLITQGLGDALEPITKKDGKEASSSSSSLTLQ 460
Query: 215 KWNEINRKATSMIRLCLTDDVAYNVLRDTSAFDMWKKLEDIYMGKILA 72
+ +I++KA S I L L D V V ++ D+W KLE++YM K LA
Sbjct: 461 QSTDIDKKAKSTIILSLGDSVIREVAKEKIVADLWAKLENVYMAKSLA 508