BLASTX nr result

ID: Cocculus23_contig00054109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00054109
         (294 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006848098.1| hypothetical protein AMTR_s00029p00212130 [A...    42   5e-06

>ref|XP_006848098.1| hypothetical protein AMTR_s00029p00212130 [Amborella trichopoda]
           gi|548851403|gb|ERN09679.1| hypothetical protein
           AMTR_s00029p00212130 [Amborella trichopoda]
          Length = 1186

 Score = 42.4 bits (98), Expect(2) = 5e-06
 Identities = 20/29 (68%), Positives = 22/29 (75%)
 Frame = +2

Query: 155 NISKGD*VYLAGCVVVVYNVESGNLLRIM 241
           NI  GD  YLAGCVVVVYNVESG+   +M
Sbjct: 51  NILTGDCFYLAGCVVVVYNVESGSQTHVM 79



 Score = 33.5 bits (75), Expect(2) = 5e-06
 Identities = 13/20 (65%), Positives = 18/20 (90%)
 Frame = +3

Query: 96  ELILEEIVGLTAKNVNGLAS 155
           +L+LEE++GLT +N NGLAS
Sbjct: 31  KLVLEEVIGLTTRNANGLAS 50


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