BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00053920
         (265 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004298001.1| PREDICTED: pentatricopeptide repeat-containi...   111   1e-22
gb|EXB58671.1| hypothetical protein L484_003927 [Morus notabilis]     108   6e-22
ref|XP_002521663.1| pentatricopeptide repeat-containing protein,...   106   3e-21
ref|XP_006453154.1| hypothetical protein CICLE_v10007840mg [Citr...   104   1e-20
ref|XP_004485618.1| PREDICTED: pentatricopeptide repeat-containi...    99   5e-19
ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containi...    99   6e-19
gb|EYU25777.1| hypothetical protein MIMGU_mgv1a021670mg [Mimulus...    98   1e-18
ref|XP_002867315.1| pentatricopeptide repeat-containing protein ...    97   2e-18
ref|XP_007148352.1| hypothetical protein PHAVU_006G201000g [Phas...    96   5e-18
ref|XP_003593286.1| Pentatricopeptide repeat-containing protein ...    96   5e-18
gb|ABN05862.1| Tetratricopeptide-like helical [Medicago truncatula]    96   5e-18
ref|XP_006353793.1| PREDICTED: pentatricopeptide repeat-containi...    94   2e-17
ref|XP_006412634.1| hypothetical protein EUTSA_v10024712mg [Eutr...    94   2e-17
ref|XP_004243907.1| PREDICTED: pentatricopeptide repeat-containi...    93   4e-17
ref|XP_006283376.1| hypothetical protein CARUB_v10004419mg [Caps...    89   6e-16
gb|ABR17838.1| unknown [Picea sitchensis]                              87   2e-15
sp|O65543.2|PP343_ARATH RecName: Full=Pentatricopeptide repeat-c...    86   5e-15
ref|NP_194836.1| pentatricopeptide repeat-containing protein [Ar...    86   5e-15
gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]         85   9e-15
gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossyp...    85   9e-15

>ref|XP_004298001.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 584

 Score =  111 bits (277), Expect = 1e-22
 Identities = 50/87 (57%), Positives = 66/87 (75%)
 Frame = +2

Query: 2   LKPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASA 181
           LKPN+VT++A+LPAC ELG + HGK+IH Y +RHGF+SD H +A+LI+MYC+    M  A
Sbjct: 234 LKPNRVTVLAILPACAELGDIGHGKEIHAYTYRHGFESDPHCSAALIHMYCKRGNEMRPA 293

Query: 182 MLVFERFEGKDVVMWSTMIRGYSSRGE 262
            L+FE+   KDVVMWS+MI  YS  G+
Sbjct: 294 ELIFEKVSLKDVVMWSSMIGSYSQCGD 320



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 28/86 (32%), Positives = 45/86 (52%)
 Frame = +2

Query: 2   LKPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASA 181
           + PN VTL+A++  C  L  L+ G  +H Y  + G +SD  +  +LI MY +C   +  +
Sbjct: 336 IDPNSVTLLAIISTCTSLSSLQIGCGVHSYVLKSGLNSDIFIGNALINMYAKC-GCLTDS 394

Query: 182 MLVFERFEGKDVVMWSTMIRGYSSRG 259
             +F+     D V WSTM+  +   G
Sbjct: 395 HKIFKEMPSIDSVSWSTMVESFGRHG 420


>gb|EXB58671.1| hypothetical protein L484_003927 [Morus notabilis]
          Length = 574

 Score =  108 bits (271), Expect = 6e-22
 Identities = 45/84 (53%), Positives = 64/84 (76%)
 Frame = +2

Query: 2   LKPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASA 181
           + PN+VT++A+LP C ELG +KHGK+IHG+A RHG   D H +A+L++MYC+C  A  +A
Sbjct: 242 VSPNRVTMMAILPVCAELGYIKHGKEIHGHAVRHGIHLDPHFSAALVHMYCKCEGASVAA 301

Query: 182 MLVFERFEGKDVVMWSTMIRGYSS 253
            L+FE    +DVV+WS++I GYSS
Sbjct: 302 ELIFESSSVRDVVLWSSIIGGYSS 325



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 34/85 (40%), Positives = 50/85 (58%)
 Frame = +2

Query: 5   KPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASAM 184
           KPN VTL+AV+ A   L  L  G+++HGY+ + G +SD  +  +LI MY +C   + SA 
Sbjct: 346 KPNSVTLLAVISASTSLSSLDLGREVHGYSLQSGLNSDIFVGNALIDMYAKC-GCIDSAC 404

Query: 185 LVFERFEGKDVVMWSTMIRGYSSRG 259
            +F     +D V WST+I G+   G
Sbjct: 405 QIFVEMPTRDSVSWSTLICGHGLHG 429


>ref|XP_002521663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539054|gb|EEF40650.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 578

 Score =  106 bits (265), Expect = 3e-21
 Identities = 49/82 (59%), Positives = 61/82 (74%)
 Frame = +2

Query: 2   LKPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASA 181
           ++PN+VTL+A+LPA  ELG  K GK+IHGYAFRHGFD D H  +SLI++YCR R  +  A
Sbjct: 225 VRPNRVTLIAILPAFAELGCAKTGKEIHGYAFRHGFDLDHHFLSSLIHIYCRSREGLQLA 284

Query: 182 MLVFERFEGKDVVMWSTMIRGY 247
            L FER   KDVVMWS++I  Y
Sbjct: 285 KLTFERSNVKDVVMWSSIIGSY 306



 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 35/85 (41%), Positives = 50/85 (58%)
 Frame = +2

Query: 5   KPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASAM 184
           +PN VTL+AV+ AC  L  LK+G   HGY  + G + D+++  +LI MY +C   +AS  
Sbjct: 328 EPNSVTLLAVITACTTLTSLKNGYGTHGYIVKCGLNFDTYIGNALINMYSKCGCVVASHQ 387

Query: 185 LVFERFEGKDVVMWSTMIRGYSSRG 259
            +F+    KD V WST+I  Y   G
Sbjct: 388 -IFKEMHIKDSVSWSTLITAYGLHG 411


>ref|XP_006453154.1| hypothetical protein CICLE_v10007840mg [Citrus clementina]
           gi|557556380|gb|ESR66394.1| hypothetical protein
           CICLE_v10007840mg [Citrus clementina]
          Length = 580

 Score =  104 bits (260), Expect = 1e-20
 Identities = 48/88 (54%), Positives = 66/88 (75%)
 Frame = +2

Query: 2   LKPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASA 181
           +KP +VTL  VL AC EL  L++GK IHGYA+  GFD D HL+A+L++MYC C  A+  A
Sbjct: 227 VKPTRVTLTIVLLACAELRDLRNGKAIHGYAYCCGFDFDHHLSAALMHMYCECTEALHPA 286

Query: 182 MLVFERFEGKDVVMWSTMIRGYSSRGEI 265
            ++FER + KDVV+WS++IRGYS  G++
Sbjct: 287 RIIFERTKVKDVVIWSSIIRGYSQSGDL 314



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 29/86 (33%), Positives = 48/86 (55%)
 Frame = +2

Query: 2   LKPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASA 181
           ++PN VTL+A+L +C     L HG  +H Y  + G + D  +  +L+ MY +C  ++ S+
Sbjct: 329 IEPNSVTLLAILSSCTRQSFLSHGLGVHCYIMKAGLNFDVSIGNALMNMYSKC-GSITSS 387

Query: 182 MLVFERFEGKDVVMWSTMIRGYSSRG 259
             +F     +D V W+T+I GY   G
Sbjct: 388 HQIFNEMAARDFVSWTTLISGYGFHG 413


>ref|XP_004485618.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Cicer arietinum]
          Length = 621

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 45/87 (51%), Positives = 64/87 (73%)
 Frame = +2

Query: 2   LKPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASA 181
           +KPN+VTL+A+L AC   G  K+GK+IHGY FRHGF+S    +++LI +YC+C  ++  A
Sbjct: 267 VKPNRVTLIALLAACERPGFAKYGKEIHGYGFRHGFNSCHSFSSALINVYCQCGESLHFA 326

Query: 182 MLVFERFEGKDVVMWSTMIRGYSSRGE 262
            L+FER   +DVV+WS++I  YS RGE
Sbjct: 327 ELIFERSSLRDVVLWSSIIGSYSRRGE 353



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 31/85 (36%), Positives = 46/85 (54%)
 Frame = +2

Query: 5   KPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASAM 184
           +PN VTL+AV+ AC  L  LKHG  +H Y  + G D    +  +LI MY +C   +  ++
Sbjct: 370 EPNYVTLLAVISACTNLSSLKHGSGVHCYILKFGLDFSIFVCNALINMYAKC-GCLDDSL 428

Query: 185 LVFERFEGKDVVMWSTMIRGYSSRG 259
            +F     +D V WS++I  Y   G
Sbjct: 429 KIFLETPNRDSVTWSSLISAYGLHG 453


>ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Glycine max]
          Length = 601

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 44/85 (51%), Positives = 62/85 (72%)
 Frame = +2

Query: 8   PNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASAML 187
           PN+VT +A+L AC E G +KHGK+IHGYAFRHGF+S    +++L+ MYC+C   M  A L
Sbjct: 252 PNRVTSIALLSACAEPGFVKHGKEIHGYAFRHGFESCPSFSSALVNMYCQCGEPMHLAEL 311

Query: 188 VFERFEGKDVVMWSTMIRGYSSRGE 262
           +FE    +DVV+WS++I  +S RG+
Sbjct: 312 IFEGSSFRDVVLWSSIIGSFSRRGD 336



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 34/86 (39%), Positives = 47/86 (54%)
 Frame = +2

Query: 2   LKPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASA 181
           ++PN VTL+AV+ AC  L  LKHG  +HGY F+ GF     +  +LI MY +C     S 
Sbjct: 352 IEPNYVTLLAVISACTNLSSLKHGCGLHGYIFKFGFCFSISVGNALINMYAKCGCLNGSR 411

Query: 182 MLVFERFEGKDVVMWSTMIRGYSSRG 259
            +  E    +D V WS++I  Y   G
Sbjct: 412 KMFLE-MPNRDNVTWSSLISAYGLHG 436


>gb|EYU25777.1| hypothetical protein MIMGU_mgv1a021670mg [Mimulus guttatus]
          Length = 607

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 44/83 (53%), Positives = 64/83 (77%)
 Frame = +2

Query: 2   LKPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASA 181
           +KPN+VTLV++LPAC EL  +  G++IHGYAFRHG+D D+   ++L++MYC+   A+  A
Sbjct: 256 IKPNKVTLVSILPACAELHSISLGEEIHGYAFRHGYDLDARFLSALLHMYCKF-GALHIA 314

Query: 182 MLVFERFEGKDVVMWSTMIRGYS 250
            L+F+R   K++VMWS+MI GYS
Sbjct: 315 KLIFDRSLKKEIVMWSSMIAGYS 337


>ref|XP_002867315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297313151|gb|EFH43574.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 598

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 47/88 (53%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2   LKPNQVTLVAVLPACGELGV-LKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMAS 178
           L+PN+VTL++VLPAC ELG  L+  K+IHG++FRHGF SD  L A+ + MYCRC  +++ 
Sbjct: 247 LRPNRVTLLSVLPACVELGYGLRLVKEIHGFSFRHGFHSDDRLIAAFMTMYCRC-GSVSL 305

Query: 179 AMLVFERFEGKDVVMWSTMIRGYSSRGE 262
           + L+FE  + +DVVMWS+MI GY+  G+
Sbjct: 306 SRLLFETSKVRDVVMWSSMISGYAENGD 333



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 33/85 (38%), Positives = 46/85 (54%)
 Frame = +2

Query: 5   KPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASAM 184
           +PN VTL+AV+ AC     LK    +H    + GF S   L+ +LI MY +C  ++ +A 
Sbjct: 350 EPNSVTLLAVVSACTHSASLKIASTVHSQILKCGFMSHILLSNALIDMYAKC-GSLPAAR 408

Query: 185 LVFERFEGKDVVMWSTMIRGYSSRG 259
            VF     KD+V WS+MI  Y   G
Sbjct: 409 EVFYELNEKDLVSWSSMINAYGLHG 433


>ref|XP_007148352.1| hypothetical protein PHAVU_006G201000g [Phaseolus vulgaris]
           gi|561021575|gb|ESW20346.1| hypothetical protein
           PHAVU_006G201000g [Phaseolus vulgaris]
          Length = 607

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 45/85 (52%), Positives = 61/85 (71%)
 Frame = +2

Query: 8   PNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASAML 187
           PN+VT +A+L AC   G LKHGK+IHGYAFR GF+S S  +++LI MYC C  ++  A L
Sbjct: 253 PNRVTSIALLQACAAPGFLKHGKEIHGYAFRRGFESCSTFSSALINMYCHCGESLHLAEL 312

Query: 188 VFERFEGKDVVMWSTMIRGYSSRGE 262
           +FE    +DVV+WS++I  YS RG+
Sbjct: 313 IFEGSCCRDVVLWSSVIGSYSRRGD 337



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 31/85 (36%), Positives = 46/85 (54%)
 Frame = +2

Query: 5   KPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASAM 184
           +PN VTL+AV+ AC  +  LK G  +HG+ F+ GF     +  +LI MY +C     S  
Sbjct: 354 EPNHVTLLAVISACTNISSLKCGCGLHGHVFKCGFSFSISVGNALINMYAKCGCLDGSRK 413

Query: 185 LVFERFEGKDVVMWSTMIRGYSSRG 259
           +  E +  +D V WS++I  Y   G
Sbjct: 414 IFLEMW-NRDSVTWSSLINAYGLHG 437


>ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355482334|gb|AES63537.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 622

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 43/87 (49%), Positives = 61/87 (70%)
 Frame = +2

Query: 2   LKPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASA 181
           + PN+VTL+A+L AC   G +K+GK+IHGYAFR GFDS    + +LIY+YC C  ++  A
Sbjct: 269 VSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLA 328

Query: 182 MLVFERFEGKDVVMWSTMIRGYSSRGE 262
             +FE    +DVV+WS++I  Y+ RGE
Sbjct: 329 ERIFEGSSLRDVVLWSSIIGSYARRGE 355



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 31/85 (36%), Positives = 45/85 (52%)
 Frame = +2

Query: 5   KPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASAM 184
           +PN VTL+AV+ AC  L   KHG  IHGY  + G      +  +LI MY +C  ++  + 
Sbjct: 372 EPNYVTLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKC-GSLDDSR 430

Query: 185 LVFERFEGKDVVMWSTMIRGYSSRG 259
            +F     +D V W++MI  Y   G
Sbjct: 431 KIFLEMPSRDSVTWNSMISAYGLHG 455


>gb|ABN05862.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 460

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 43/87 (49%), Positives = 61/87 (70%)
 Frame = +2

Query: 2   LKPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASA 181
           + PN+VTL+A+L AC   G +K+GK+IHGYAFR GFDS    + +LIY+YC C  ++  A
Sbjct: 269 VSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLA 328

Query: 182 MLVFERFEGKDVVMWSTMIRGYSSRGE 262
             +FE    +DVV+WS++I  Y+ RGE
Sbjct: 329 ERIFEGSSLRDVVLWSSIIGSYARRGE 355



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 31/85 (36%), Positives = 45/85 (52%)
 Frame = +2

Query: 5   KPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASAM 184
           +PN VTL+AV+ AC  L   KHG  IHGY  + G      +  +LI MY +C  ++  + 
Sbjct: 372 EPNYVTLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKC-GSLDDSR 430

Query: 185 LVFERFEGKDVVMWSTMIRGYSSRG 259
            +F     +D V W++MI  Y   G
Sbjct: 431 KIFLEMPSRDSVTWNSMISAYGLHG 455


>ref|XP_006353793.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Solanum tuberosum]
          Length = 599

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 42/83 (50%), Positives = 60/83 (72%)
 Frame = +2

Query: 2   LKPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASA 181
           +KPN+VTL ++LPAC EL   K+GK+IHGYAFRHGFD D+  ++++++MY  C  A+   
Sbjct: 248 VKPNRVTLTSILPACAEL---KYGKEIHGYAFRHGFDLDTKFSSAIVHMYSGCGEALQPM 304

Query: 182 MLVFERFEGKDVVMWSTMIRGYS 250
             VF+R   KDVVMW+ +I  Y+
Sbjct: 305 KNVFDRSTNKDVVMWTALITSYT 327



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 32/86 (37%), Positives = 47/86 (54%)
 Frame = +2

Query: 2   LKPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASA 181
           ++PN VTL+A++ A   L  + HG+ +HGYAF  G  S   +  SLI MY +C     SA
Sbjct: 348 IQPNDVTLLALISASTNLLSVCHGRGMHGYAFTSGLSSHLFIGNSLINMYSKCGFLKDSA 407

Query: 182 MLVFERFEGKDVVMWSTMIRGYSSRG 259
             VF+    ++   WS +I  Y + G
Sbjct: 408 Q-VFQEMSIRNSASWSALINAYGTHG 432


>ref|XP_006412634.1| hypothetical protein EUTSA_v10024712mg [Eutrema salsugineum]
           gi|557113804|gb|ESQ54087.1| hypothetical protein
           EUTSA_v10024712mg [Eutrema salsugineum]
          Length = 602

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 45/88 (51%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2   LKPNQVTLVAVLPACGELGV-LKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMAS 178
           ++PN+VTL+++LPAC ELG  L+  K+IHG++FRHGF SD  L A+L+ MYCRC   ++ 
Sbjct: 250 VRPNRVTLLSILPACVELGSGLRMVKEIHGFSFRHGFHSDGRLTAALMTMYCRC-GYVSL 308

Query: 179 AMLVFERFEGKDVVMWSTMIRGYSSRGE 262
           + L+F+  + +DVVMWS+MI GY+  G+
Sbjct: 309 SRLLFKESKVRDVVMWSSMIGGYADTGD 336



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 32/85 (37%), Positives = 47/85 (55%)
 Frame = +2

Query: 5   KPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASAM 184
           +PN VTL++++ AC      +   +IH +  + GF S+  L  +LI MY +C + +A A 
Sbjct: 353 EPNSVTLLSIVSACTHSASFRFASRIHSHILKCGFMSNILLGNALIDMYAKCGSLLA-AR 411

Query: 185 LVFERFEGKDVVMWSTMIRGYSSRG 259
            VF     KD+V WSTMI  Y   G
Sbjct: 412 KVFYELNEKDLVSWSTMINAYGLHG 436


>ref|XP_004243907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Solanum lycopersicum]
          Length = 603

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 42/83 (50%), Positives = 61/83 (73%)
 Frame = +2

Query: 2   LKPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASA 181
           +KPN+VTL ++LPAC EL   K+GK+I GYAFRHGFDSD+  ++++++MY  C  A+ + 
Sbjct: 249 VKPNRVTLTSLLPACAEL---KYGKEIQGYAFRHGFDSDAKFSSAVVHMYSGCGGALQTI 305

Query: 182 MLVFERFEGKDVVMWSTMIRGYS 250
             VF+R   KDVVMW+ +I  Y+
Sbjct: 306 KNVFDRSTKKDVVMWTALITSYT 328



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 33/86 (38%), Positives = 47/86 (54%)
 Frame = +2

Query: 2   LKPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASA 181
           ++PN VTL+A++ AC  L  + HG+ +HGYAF  G  S   +  SLI MY +C     SA
Sbjct: 349 IQPNDVTLLALICACTNLLSVCHGRGMHGYAFTSGLSSHLFIGNSLINMYSKCGFLKDSA 408

Query: 182 MLVFERFEGKDVVMWSTMIRGYSSRG 259
              F+    +D   WS +I  Y + G
Sbjct: 409 Q-AFQEMSIRDSASWSALINAYGTHG 433


>ref|XP_006283376.1| hypothetical protein CARUB_v10004419mg [Capsella rubella]
           gi|482552081|gb|EOA16274.1| hypothetical protein
           CARUB_v10004419mg [Capsella rubella]
          Length = 598

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 45/88 (51%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2   LKPNQVTLVAVLPACGELGV-LKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMAS 178
           L PN+VT+++VLPAC ELG  L+  K+IHG++FR+GF S+  L ASL+ MYCRC   ++ 
Sbjct: 247 LIPNRVTVLSVLPACVELGSGLRLLKEIHGFSFRYGFHSEDRLTASLMTMYCRC-GNVSL 305

Query: 179 AMLVFERFEGKDVVMWSTMIRGYSSRGE 262
           + L+F   + +DVVMWS+MI GY+  G+
Sbjct: 306 SRLLFSTSKVRDVVMWSSMISGYAETGD 333



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 31/85 (36%), Positives = 45/85 (52%)
 Frame = +2

Query: 5   KPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASAM 184
           +PN VTL+AV+ AC     L     IH    + GF S   +  ++I MY +C +  A+  
Sbjct: 350 EPNSVTLLAVVSACTHSASLTFASTIHSQILKSGFMSHILVGNAIIDMYAKCGSLRAARE 409

Query: 185 LVFERFEGKDVVMWSTMIRGYSSRG 259
           + +E  E KD+V WS+MI  Y   G
Sbjct: 410 VYYELNE-KDLVSWSSMINAYGLHG 433


>gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 41/86 (47%), Positives = 58/86 (67%)
 Frame = +2

Query: 2   LKPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASA 181
           +KPN +T+V+VLPAC  L  L+ G+QIHGYA R GF+S+  +  +L+ MY +C   + SA
Sbjct: 318 IKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKC-GNVNSA 376

Query: 182 MLVFERFEGKDVVMWSTMIRGYSSRG 259
             +FER   K+VV W+ +I GYS  G
Sbjct: 377 YKLFERMPKKNVVAWNAIISGYSQHG 402



 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 36/86 (41%), Positives = 52/86 (60%)
 Frame = +2

Query: 2   LKPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASA 181
           +KP+   +V+VLPAC     L+ GKQIHGY  R GF+S+  +   L+ +Y +C   + +A
Sbjct: 419 IKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKC-GNVNTA 477

Query: 182 MLVFERFEGKDVVMWSTMIRGYSSRG 259
             +FER   +DVV W+TMI  Y   G
Sbjct: 478 QKLFERMPEQDVVSWTTMILAYGIHG 503



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 37/83 (44%), Positives = 51/83 (61%)
 Frame = +2

Query: 2   LKPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASA 181
           +KPN  TLV+V+P C  L  L+ GKQIH YA R G +SD  +   L+ MY +C   + +A
Sbjct: 217 IKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKC-GNVNTA 275

Query: 182 MLVFERFEGKDVVMWSTMIRGYS 250
             +FER   +DV  W+ +I GYS
Sbjct: 276 HKLFERMPIRDVASWNAIIGGYS 298



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 29/87 (33%), Positives = 52/87 (59%)
 Frame = +2

Query: 2   LKPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASA 181
           + P+++  ++V+ ACG    L+ G+++H      GF+SD  +  +L  MY +C  ++ +A
Sbjct: 116 INPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKC-GSLENA 174

Query: 182 MLVFERFEGKDVVMWSTMIRGYSSRGE 262
             VF+R   +DVV W+ +I GYS  G+
Sbjct: 175 RQVFDRMPKRDVVSWNAIIAGYSQNGQ 201


>sp|O65543.2|PP343_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31070, mitochondrial; Flags: Precursor
          Length = 624

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 44/88 (50%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2   LKPNQVTLVAVLPACGELGVLKH-GKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMAS 178
           L+PN+VTL++VLPAC EL       K+IHG++FRHG  +D  L A+ + MYCRC     S
Sbjct: 258 LRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLS 317

Query: 179 AMLVFERFEGKDVVMWSTMIRGYSSRGE 262
            +L FE  + +DVVMWS+MI GY+  G+
Sbjct: 318 RVL-FETSKVRDVVMWSSMISGYAETGD 344



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 30/86 (34%), Positives = 46/86 (53%)
 Frame = +2

Query: 2   LKPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASA 181
           ++ N VTL+A++ AC    +L     +H    + GF S   L  +LI MY +C  ++++A
Sbjct: 360 IEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKC-GSLSAA 418

Query: 182 MLVFERFEGKDVVMWSTMIRGYSSRG 259
             VF     KD+V WS+MI  Y   G
Sbjct: 419 REVFYELTEKDLVSWSSMINAYGLHG 444


>ref|NP_194836.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|2980759|emb|CAA18186.1| putative protein [Arabidopsis
           thaliana] gi|7270009|emb|CAB79825.1| putative protein
           [Arabidopsis thaliana] gi|332660453|gb|AEE85853.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 613

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 44/88 (50%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2   LKPNQVTLVAVLPACGELGVLKH-GKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMAS 178
           L+PN+VTL++VLPAC EL       K+IHG++FRHG  +D  L A+ + MYCRC     S
Sbjct: 247 LRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLS 306

Query: 179 AMLVFERFEGKDVVMWSTMIRGYSSRGE 262
            +L FE  + +DVVMWS+MI GY+  G+
Sbjct: 307 RVL-FETSKVRDVVMWSSMISGYAETGD 333



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 30/86 (34%), Positives = 46/86 (53%)
 Frame = +2

Query: 2   LKPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASA 181
           ++ N VTL+A++ AC    +L     +H    + GF S   L  +LI MY +C  ++++A
Sbjct: 349 IEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKC-GSLSAA 407

Query: 182 MLVFERFEGKDVVMWSTMIRGYSSRG 259
             VF     KD+V WS+MI  Y   G
Sbjct: 408 REVFYELTEKDLVSWSSMINAYGLHG 433


>gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 38/86 (44%), Positives = 54/86 (62%)
 Frame = +2

Query: 2   LKPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASA 181
           LKP+  T+  VLPAC  L  L+ GK+IHGY  R+G+ SD H+A +L+ +Y +C   +  A
Sbjct: 428 LKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKC-GVLGLA 486

Query: 182 MLVFERFEGKDVVMWSTMIRGYSSRG 259
            L+F+    KD+V W+ MI GY   G
Sbjct: 487 RLLFDMIPSKDLVSWTVMIAGYGMHG 512



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/80 (33%), Positives = 46/80 (57%)
 Frame = +2

Query: 20  TLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASAMLVFER 199
           T+++VL  C   G L  GK +H  A +  F+   + + +L+ MY +C   +  A+ VFE+
Sbjct: 253 TIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC-GDLDGALRVFEK 311

Query: 200 FEGKDVVMWSTMIRGYSSRG 259
              ++VV W++MI GY+  G
Sbjct: 312 MGERNVVSWTSMIAGYTRDG 331


>gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 38/86 (44%), Positives = 54/86 (62%)
 Frame = +2

Query: 2   LKPNQVTLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASA 181
           LKP+  T+  VLPAC  L  L+ GK+IHGY  R+G+ SD H+A +L+ +Y +C   +  A
Sbjct: 428 LKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKC-GVLGLA 486

Query: 182 MLVFERFEGKDVVMWSTMIRGYSSRG 259
            L+F+    KD+V W+ MI GY   G
Sbjct: 487 RLLFDMIPSKDLVSWTVMIAGYGMHG 512



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/80 (33%), Positives = 46/80 (57%)
 Frame = +2

Query: 20  TLVAVLPACGELGVLKHGKQIHGYAFRHGFDSDSHLAASLIYMYCRCRAAMASAMLVFER 199
           T+++VL  C   G L  GK +H  A +  F+   + + +L+ MY +C   +  A+ VFE+
Sbjct: 253 TIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC-GDLDGALRVFEK 311

Query: 200 FEGKDVVMWSTMIRGYSSRG 259
              ++VV W++MI GY+  G
Sbjct: 312 MGERNVVSWTSMIAGYTRDG 331