BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00053906
         (479 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528032.1| pentatricopeptide repeat-containing protein,...   110   2e-22
ref|XP_007221976.1| hypothetical protein PRUPE_ppa002791mg [Prun...   109   3e-22
gb|EYU39130.1| hypothetical protein MIMGU_mgv1a019989mg, partial...   107   2e-21
ref|XP_004247672.1| PREDICTED: pentatricopeptide repeat-containi...   107   2e-21
emb|CBI31329.3| unnamed protein product [Vitis vinifera]              107   2e-21
ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containi...   107   2e-21
emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]   107   2e-21
ref|XP_007022286.1| Tetratricopeptide repeat (TPR)-like superfam...   106   3e-21
ref|XP_006360760.1| PREDICTED: pentatricopeptide repeat-containi...   105   5e-21
ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containi...   105   5e-21
ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containi...   103   2e-20
gb|EXC31027.1| hypothetical protein L484_021329 [Morus notabilis]     103   3e-20
ref|XP_007157004.1| hypothetical protein PHAVU_002G035600g [Phas...   103   3e-20
gb|EPS62868.1| hypothetical protein M569_11919, partial [Genlise...   103   3e-20
ref|XP_004516245.1| PREDICTED: pentatricopeptide repeat-containi...   103   3e-20
ref|NP_177305.1| pentatricopeptide repeat-containing protein [Ar...   102   4e-20
ref|XP_002888839.1| pentatricopeptide repeat-containing protein ...   102   6e-20
ref|XP_006351115.1| PREDICTED: pentatricopeptide repeat-containi...   101   1e-19
ref|XP_006390765.1| hypothetical protein EUTSA_v10019500mg [Eutr...   101   1e-19
ref|XP_006441639.1| hypothetical protein CICLE_v10019278mg [Citr...   100   2e-19

>ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532562|gb|EEF34350.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 730

 Score =  110 bits (275), Expect = 2e-22
 Identities = 51/84 (60%), Positives = 65/84 (77%)
 Frame = -2

Query: 472 MPFQPSPAIWASLIVACRIKGNITIGEWAADKLLELGPEKLGFYVLIADMYSSAASWSKL 293
           MP++PS A+WA+L+ ACRI GN  IGEWAA+KLLE+ PE  G+YVLIA+MY++A  WSKL
Sbjct: 595 MPYRPSSAMWATLLGACRIHGNAEIGEWAAEKLLEMRPENSGYYVLIANMYAAAGCWSKL 654

Query: 292 AKVRTFMKALGMINVPTYACTDTG 221
           AKVRT+M+ LG+   P  A  D G
Sbjct: 655 AKVRTYMRDLGVRKAPGCAWVDVG 678


>ref|XP_007221976.1| hypothetical protein PRUPE_ppa002791mg [Prunus persica]
           gi|462418912|gb|EMJ23175.1| hypothetical protein
           PRUPE_ppa002791mg [Prunus persica]
          Length = 633

 Score =  109 bits (273), Expect = 3e-22
 Identities = 50/84 (59%), Positives = 65/84 (77%)
 Frame = -2

Query: 472 MPFQPSPAIWASLIVACRIKGNITIGEWAADKLLELGPEKLGFYVLIADMYSSAASWSKL 293
           MP+ P+ A+WA+L+ ACRI GNI IGEWAA+KLLE+ PE  G+YVLIA+MY++A  W+KL
Sbjct: 502 MPYSPTSAMWATLLGACRIHGNIDIGEWAAEKLLEMRPENSGYYVLIANMYAAAGCWNKL 561

Query: 292 AKVRTFMKALGMINVPTYACTDTG 221
           A+VRTFM+ LG+   P  A  D G
Sbjct: 562 ARVRTFMRDLGVRKAPGCAWVDVG 585


>gb|EYU39130.1| hypothetical protein MIMGU_mgv1a019989mg, partial [Mimulus
           guttatus]
          Length = 765

 Score =  107 bits (267), Expect = 2e-21
 Identities = 48/86 (55%), Positives = 66/86 (76%)
 Frame = -2

Query: 478 MEMPFQPSPAIWASLIVACRIKGNITIGEWAADKLLELGPEKLGFYVLIADMYSSAASWS 299
           ++MP+ P+P +WA+LI +CR+ GN  IGEWAA+KLLE+ P+  G+YVLIA+MY++A  W+
Sbjct: 576 LKMPYDPTPEMWATLIGSCRVHGNTEIGEWAAEKLLEMKPKNSGYYVLIANMYAAAGCWT 635

Query: 298 KLAKVRTFMKALGMINVPTYACTDTG 221
           KLAKVRTFM+ LG+   P  A  D G
Sbjct: 636 KLAKVRTFMRDLGVRKEPGCAWIDIG 661


>ref|XP_004247672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Solanum lycopersicum]
          Length = 739

 Score =  107 bits (267), Expect = 2e-21
 Identities = 50/86 (58%), Positives = 65/86 (75%)
 Frame = -2

Query: 478 MEMPFQPSPAIWASLIVACRIKGNITIGEWAADKLLELGPEKLGFYVLIADMYSSAASWS 299
           ++MPF+P+P +WA+L+ ACRI  N  IGEWAA+KLLEL P+K G+YVLIA+MY+ A  W+
Sbjct: 601 IKMPFEPTPEMWATLLGACRIHRNTEIGEWAAEKLLELRPDKPGYYVLIANMYADAGRWN 660

Query: 298 KLAKVRTFMKALGMINVPTYACTDTG 221
           KLAKVRT M+  G+   P  A  DTG
Sbjct: 661 KLAKVRTVMRDFGVRKSPGCAWVDTG 686


>emb|CBI31329.3| unnamed protein product [Vitis vinifera]
          Length = 753

 Score =  107 bits (267), Expect = 2e-21
 Identities = 50/84 (59%), Positives = 64/84 (76%)
 Frame = -2

Query: 472 MPFQPSPAIWASLIVACRIKGNITIGEWAADKLLELGPEKLGFYVLIADMYSSAASWSKL 293
           MP++P+PA+WA+LI ACRI  N  IGEWAA+KLLE+ PE  G+YVLIA+MY++A  W+KL
Sbjct: 557 MPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKL 616

Query: 292 AKVRTFMKALGMINVPTYACTDTG 221
           AKVR FM+ LG+   P  A  D G
Sbjct: 617 AKVRIFMRDLGVRKAPGCAWVDVG 640


>ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Vitis vinifera]
          Length = 748

 Score =  107 bits (267), Expect = 2e-21
 Identities = 50/84 (59%), Positives = 64/84 (76%)
 Frame = -2

Query: 472 MPFQPSPAIWASLIVACRIKGNITIGEWAADKLLELGPEKLGFYVLIADMYSSAASWSKL 293
           MP++P+PA+WA+LI ACRI  N  IGEWAA+KLLE+ PE  G+YVLIA+MY++A  W+KL
Sbjct: 602 MPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKL 661

Query: 292 AKVRTFMKALGMINVPTYACTDTG 221
           AKVR FM+ LG+   P  A  D G
Sbjct: 662 AKVRIFMRDLGVRKAPGCAWVDVG 685


>emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
          Length = 822

 Score =  107 bits (267), Expect = 2e-21
 Identities = 50/84 (59%), Positives = 64/84 (76%)
 Frame = -2

Query: 472 MPFQPSPAIWASLIVACRIKGNITIGEWAADKLLELGPEKLGFYVLIADMYSSAASWSKL 293
           MP++P+PA+WA+LI ACRI  N  IGEWAA+KLLE+ PE  G+YVLIA+MY++A  W+KL
Sbjct: 676 MPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKL 735

Query: 292 AKVRTFMKALGMINVPTYACTDTG 221
           AKVR FM+ LG+   P  A  D G
Sbjct: 736 AKVRXFMRDLGVRKAPGCAWVDVG 759


>ref|XP_007022286.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao] gi|508721914|gb|EOY13811.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative [Theobroma cacao]
          Length = 739

 Score =  106 bits (265), Expect = 3e-21
 Identities = 49/84 (58%), Positives = 65/84 (77%)
 Frame = -2

Query: 472 MPFQPSPAIWASLIVACRIKGNITIGEWAADKLLELGPEKLGFYVLIADMYSSAASWSKL 293
           MP++PS ++WA+L+ ACRI GN  IGEWAA+KLL+L P+  G+YVLIA+MY++A  WSKL
Sbjct: 604 MPYKPSASMWATLLGACRIHGNTDIGEWAAEKLLQLRPQNSGYYVLIANMYAAAGCWSKL 663

Query: 292 AKVRTFMKALGMINVPTYACTDTG 221
           AKVR+FM+ LG+   P  A  D G
Sbjct: 664 AKVRSFMRDLGVKKSPGCAWVDVG 687


>ref|XP_006360760.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Solanum tuberosum]
          Length = 739

 Score =  105 bits (263), Expect = 5e-21
 Identities = 49/86 (56%), Positives = 65/86 (75%)
 Frame = -2

Query: 478 MEMPFQPSPAIWASLIVACRIKGNITIGEWAADKLLELGPEKLGFYVLIADMYSSAASWS 299
           ++MPF+P+P +WA+L+ ACRI  N  IGEWAA+KLLEL P+K G+YVLIA+MY+ A  W+
Sbjct: 601 IKMPFEPTPEMWATLLGACRIHRNTEIGEWAAEKLLELRPDKPGYYVLIANMYADAGCWN 660

Query: 298 KLAKVRTFMKALGMINVPTYACTDTG 221
           KLA+VRT M+  G+   P  A  DTG
Sbjct: 661 KLAEVRTVMRDFGVRKSPGCAWVDTG 686


>ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Cucumis sativus]
           gi|449481506|ref|XP_004156203.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g71490-like [Cucumis sativus]
          Length = 712

 Score =  105 bits (263), Expect = 5e-21
 Identities = 48/84 (57%), Positives = 65/84 (77%)
 Frame = -2

Query: 472 MPFQPSPAIWASLIVACRIKGNITIGEWAADKLLELGPEKLGFYVLIADMYSSAASWSKL 293
           MP++P+ AIWA+LI AC I GN+ IGEWAA+KLLE+ PE  G+YVLIA+MY++A SWSKL
Sbjct: 581 MPYRPTSAIWATLIGACCIHGNMDIGEWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSKL 640

Query: 292 AKVRTFMKALGMINVPTYACTDTG 221
           A++RT M+  G+  +P  +  D G
Sbjct: 641 AEIRTLMRDSGVAKIPGCSWVDVG 664


>ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Glycine max]
          Length = 723

 Score =  103 bits (258), Expect = 2e-20
 Identities = 47/84 (55%), Positives = 64/84 (76%)
 Frame = -2

Query: 472 MPFQPSPAIWASLIVACRIKGNITIGEWAADKLLELGPEKLGFYVLIADMYSSAASWSKL 293
           MP++P+ A+WA+L+ ACRI GN  +GEWAA KLLE+ P+  G+YVLIA+MY++A SW KL
Sbjct: 582 MPYKPTSAMWATLLGACRIHGNTEMGEWAAGKLLEMKPDHSGYYVLIANMYAAAGSWRKL 641

Query: 292 AKVRTFMKALGMINVPTYACTDTG 221
           A+VRT+M+ LG+   P  A  D G
Sbjct: 642 AEVRTYMRNLGVRKAPGCAWVDVG 665


>gb|EXC31027.1| hypothetical protein L484_021329 [Morus notabilis]
          Length = 683

 Score =  103 bits (256), Expect = 3e-20
 Identities = 45/84 (53%), Positives = 64/84 (76%)
 Frame = -2

Query: 472 MPFQPSPAIWASLIVACRIKGNITIGEWAADKLLELGPEKLGFYVLIADMYSSAASWSKL 293
           MP++P+PA+WA+LI ACRI GN+ IGEWAA+ LL++ P+  G+YVLI++MY++   W+K+
Sbjct: 550 MPYKPTPAMWATLIGACRIHGNLEIGEWAAENLLKMRPKNSGYYVLISNMYAATGRWNKI 609

Query: 292 AKVRTFMKALGMINVPTYACTDTG 221
           A VRTFM+ LG+   P  A  D G
Sbjct: 610 AMVRTFMRDLGVRKAPGCAWIDVG 633


>ref|XP_007157004.1| hypothetical protein PHAVU_002G035600g [Phaseolus vulgaris]
           gi|561030419|gb|ESW28998.1| hypothetical protein
           PHAVU_002G035600g [Phaseolus vulgaris]
          Length = 730

 Score =  103 bits (256), Expect = 3e-20
 Identities = 47/84 (55%), Positives = 63/84 (75%)
 Frame = -2

Query: 472 MPFQPSPAIWASLIVACRIKGNITIGEWAADKLLELGPEKLGFYVLIADMYSSAASWSKL 293
           MP++P+  +WA+LI ACRI GN  +GEWAA KLLE+ P+  G+YVLIA+MY++A  WSKL
Sbjct: 589 MPYKPTSGMWATLIGACRIHGNTVMGEWAAGKLLEMKPDHSGYYVLIANMYAAAGCWSKL 648

Query: 292 AKVRTFMKALGMINVPTYACTDTG 221
           A+VRT+M+ LG+   P  A  D G
Sbjct: 649 AEVRTYMRNLGVRKAPGCAWVDIG 672


>gb|EPS62868.1| hypothetical protein M569_11919, partial [Genlisea aurea]
          Length = 655

 Score =  103 bits (256), Expect = 3e-20
 Identities = 48/86 (55%), Positives = 63/86 (73%)
 Frame = -2

Query: 478 MEMPFQPSPAIWASLIVACRIKGNITIGEWAADKLLELGPEKLGFYVLIADMYSSAASWS 299
           + MP++P+  IWA+LI ACRI GN  +GEWAADKLLE+     G+YVLIA+MY++A  WS
Sbjct: 537 LRMPYEPTAEIWATLIGACRIHGNTEVGEWAADKLLEMKSRNSGYYVLIANMYAAAGYWS 596

Query: 298 KLAKVRTFMKALGMINVPTYACTDTG 221
           KLA+VR++MK LG+   P  A  D G
Sbjct: 597 KLAEVRSYMKDLGVSKDPGCAWVDLG 622


>ref|XP_004516245.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Cicer arietinum]
          Length = 684

 Score =  103 bits (256), Expect = 3e-20
 Identities = 48/84 (57%), Positives = 62/84 (73%)
 Frame = -2

Query: 472 MPFQPSPAIWASLIVACRIKGNITIGEWAADKLLELGPEKLGFYVLIADMYSSAASWSKL 293
           MP++P+ A+WA+LI ACRI GN  +GEWAA +LLE+ P   G+YVLIA+MY++A  WSKL
Sbjct: 552 MPYKPTTAMWATLIGACRIHGNTVMGEWAAGELLEMKPNHSGYYVLIANMYAAAGCWSKL 611

Query: 292 AKVRTFMKALGMINVPTYACTDTG 221
           AKVR FM+ LG+   P  A  D G
Sbjct: 612 AKVRIFMRDLGVRKAPGCAWVDVG 635


>ref|NP_177305.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169720|sp|Q9C9I6.1|PP116_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g71490 gi|12323739|gb|AAG51835.1|AC016163_24 unknown
           protein; 40702-42747 [Arabidopsis thaliana]
           gi|56381899|gb|AAV85668.1| At1g71490 [Arabidopsis
           thaliana] gi|56790238|gb|AAW30036.1| At1g71490
           [Arabidopsis thaliana] gi|332197086|gb|AEE35207.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 681

 Score =  102 bits (255), Expect = 4e-20
 Identities = 49/83 (59%), Positives = 63/83 (75%)
 Frame = -2

Query: 472 MPFQPSPAIWASLIVACRIKGNITIGEWAADKLLELGPEKLGFYVLIADMYSSAASWSKL 293
           MP++PS A WA+L+ AC I GN  IG+WAA+KLLE+ PE  G+YVLIA+MY++A SWSKL
Sbjct: 545 MPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKL 604

Query: 292 AKVRTFMKALGMINVPTYACTDT 224
           A+VRT M+ LG+   P  A  DT
Sbjct: 605 AEVRTIMRDLGVKKDPGCAWIDT 627


>ref|XP_002888839.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297334680|gb|EFH65098.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 682

 Score =  102 bits (254), Expect = 6e-20
 Identities = 49/87 (56%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
 Frame = -2

Query: 472 MPFQPSPAIWASLIVACRIKGNITIGEWAADKLLELGPEKLGFYVLIADMYSSAASWSKL 293
           MP++PS A WA+L+ AC I GN  IG+WAA+KLLE+ PE  G+YVLIA+MY++A SWSKL
Sbjct: 546 MPYEPSGATWATLLNACHIHGNTEIGKWAAEKLLEMKPENPGYYVLIANMYATAGSWSKL 605

Query: 292 AKVRTFMKALGMINVP--TYACTDTGY 218
           A+VRT M+ LG+   P   +  TD+G+
Sbjct: 606 AEVRTIMRDLGVRKDPGCAWINTDSGF 632


>ref|XP_006351115.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like isoform X1 [Solanum tuberosum]
           gi|565368979|ref|XP_006351116.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g71490-like isoform X2 [Solanum tuberosum]
          Length = 737

 Score =  101 bits (252), Expect = 1e-19
 Identities = 47/86 (54%), Positives = 63/86 (73%)
 Frame = -2

Query: 478 MEMPFQPSPAIWASLIVACRIKGNITIGEWAADKLLELGPEKLGFYVLIADMYSSAASWS 299
           ++MP++P+P +WA+L+ AC+I  N  IGEWAA+KLLEL P   G+YVLIA+MY+ A  W+
Sbjct: 600 IKMPYEPTPEMWATLLGACKIHRNTEIGEWAAEKLLELRPVNPGYYVLIANMYADAGCWN 659

Query: 298 KLAKVRTFMKALGMINVPTYACTDTG 221
           KLAKVRT M+  G+   P  A  DTG
Sbjct: 660 KLAKVRTVMRDFGVRKSPGCAWVDTG 685


>ref|XP_006390765.1| hypothetical protein EUTSA_v10019500mg [Eutrema salsugineum]
           gi|557087199|gb|ESQ28051.1| hypothetical protein
           EUTSA_v10019500mg [Eutrema salsugineum]
          Length = 724

 Score =  101 bits (251), Expect = 1e-19
 Identities = 48/84 (57%), Positives = 62/84 (73%)
 Frame = -2

Query: 472 MPFQPSPAIWASLIVACRIKGNITIGEWAADKLLELGPEKLGFYVLIADMYSSAASWSKL 293
           MP++PS A+WA+L+ AC I GN  IG+WAA+KLLE+ PE  G YVLIA+MY++A SW KL
Sbjct: 588 MPYEPSSAMWATLLNACHIHGNTEIGKWAAEKLLEMKPENPGHYVLIANMYAAAGSWRKL 647

Query: 292 AKVRTFMKALGMINVPTYACTDTG 221
           A+VRT M+ LG+   P  A  D G
Sbjct: 648 AEVRTSMRDLGVKKAPGSAWIDIG 671


>ref|XP_006441639.1| hypothetical protein CICLE_v10019278mg [Citrus clementina]
           gi|557543901|gb|ESR54879.1| hypothetical protein
           CICLE_v10019278mg [Citrus clementina]
          Length = 634

 Score =  100 bits (249), Expect = 2e-19
 Identities = 47/85 (55%), Positives = 62/85 (72%)
 Frame = -2

Query: 475 EMPFQPSPAIWASLIVACRIKGNITIGEWAADKLLELGPEKLGFYVLIADMYSSAASWSK 296
           +MP+ P+ A+WA+L+ AC+I  N  IGEWAA+KLLE  PE  G+YVLIA+MY++A  W K
Sbjct: 498 KMPYTPTSAMWATLLGACQIHRNTGIGEWAAEKLLETRPENSGYYVLIANMYAAAGCWDK 557

Query: 295 LAKVRTFMKALGMINVPTYACTDTG 221
           LAKVRT M+ LG+  +P  A  D G
Sbjct: 558 LAKVRTCMRDLGVRKIPGCAWVDAG 582