BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00053748
         (439 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]                74   3e-20
ref|XP_006386697.1| hypothetical protein POPTR_0002s19150g [Popu...    67   4e-14
ref|XP_006370795.1| hypothetical protein POPTR_0001s47640g, part...    62   1e-12
emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera]    63   4e-11
ref|XP_006376619.1| hypothetical protein POPTR_0012s01410g [Popu...    66   4e-09
gb|ABA26965.1| TO22-2 [Taraxacum officinale]                           49   6e-09
ref|XP_006380061.1| hypothetical protein POPTR_0008s20760g [Popu...    60   8e-09
ref|XP_006372009.1| hypothetical protein POPTR_0018s07320g [Popu...    64   3e-08
ref|XP_006369694.1| hypothetical protein POPTR_0001s29110g [Popu...    59   9e-07
ref|XP_006375139.1| hypothetical protein POPTR_0014s04710g [Popu...    46   3e-06

>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score = 73.6 bits (179), Expect(2) = 3e-20
 Identities = 37/53 (69%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
 Frame = +1

Query: 283 VMTADDTPMSLVGIGPIVTPHLSLSNVYCIPKLKLNLISVSQLCDSG-YSVHF 438
           VMTAD TPM L G+G +VT HLSL NVY IPKLKLNL S+ Q+CDSG Y V F
Sbjct: 370 VMTADGTPMPLAGVGSVVTLHLSLPNVYLIPKLKLNLASIGQICDSGDYLVMF 422



 Score = 50.4 bits (119), Expect(2) = 3e-20
 Identities = 29/51 (56%), Positives = 35/51 (68%)
 Frame = +3

Query: 87  TLAEQLHRYLAVQSHAMFATSSVGLSSYEPSGIS*ST*VFDSGASHHMSYD 239
           TLAEQ  ++L++Q  AM A SS+G   +  SGIS S  V DSGASHHMS D
Sbjct: 306 TLAEQFQKFLSLQPQAMSA-SSIGQLPHSSSGISHSEWVLDSGASHHMSPD 355


>ref|XP_006386697.1| hypothetical protein POPTR_0002s19150g [Populus trichocarpa]
           gi|550345360|gb|ERP64494.1| hypothetical protein
           POPTR_0002s19150g [Populus trichocarpa]
          Length = 146

 Score = 67.0 bits (162), Expect(2) = 4e-14
 Identities = 33/46 (71%), Positives = 37/46 (80%)
 Frame = +1

Query: 283 VMTADDTPMSLVGIGPIVTPHLSLSNVYCIPKLKLNLISVSQLCDS 420
           V+TADDT MSL G+G +VT HLSLSNVY I KL+LNL  V QLCDS
Sbjct: 82  VITADDTSMSLAGVGSVVTSHLSLSNVYLILKLRLNLAFVCQLCDS 127



 Score = 36.6 bits (83), Expect(2) = 4e-14
 Identities = 20/45 (44%), Positives = 27/45 (60%)
 Frame = +3

Query: 105 HRYLAVQSHAMFATSSVGLSSYEPSGIS*ST*VFDSGASHHMSYD 239
           +++L++Q  AM   S VG   +  SG+S S  V D  ASHHMS D
Sbjct: 23  YKFLSLQPQAMSVFSFVGQLPHSSSGMSFSEWVLDYDASHHMSPD 67


>ref|XP_006370795.1| hypothetical protein POPTR_0001s47640g, partial [Populus
           trichocarpa] gi|550350099|gb|ERP67364.1| hypothetical
           protein POPTR_0001s47640g, partial [Populus trichocarpa]
          Length = 194

 Score = 62.0 bits (149), Expect(2) = 1e-12
 Identities = 29/45 (64%), Positives = 35/45 (77%)
 Frame = +1

Query: 283 VMTADDTPMSLVGIGPIVTPHLSLSNVYCIPKLKLNLISVSQLCD 417
           VMTADDT + L G+  ++TPHLSLSNVY IP L LNL+SV Q+ D
Sbjct: 137 VMTADDTFIPLAGVAIVITPHLSLSNVYLIPNLTLNLVSVGQIYD 181



 Score = 36.6 bits (83), Expect(2) = 1e-12
 Identities = 19/53 (35%), Positives = 31/53 (58%)
 Frame = +3

Query: 81  LATLAEQLHRYLAVQSHAMFATSSVGLSSYEPSGIS*ST*VFDSGASHHMSYD 239
           L+ +A+Q  ++L++Q    +A+S V    +   G+S    V +SG SHHMS D
Sbjct: 70  LSMIAKQFQKFLSLQPQTTYASSFVDQLPHSSLGMSYFGWVLNSGVSHHMSPD 122


>emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera]
          Length = 993

 Score = 63.2 bits (152), Expect(2) = 4e-11
 Identities = 31/46 (67%), Positives = 35/46 (76%)
 Frame = +1

Query: 283 VMTADDTPMSLVGIGPIVTPHLSLSNVYCIPKLKLNLISVSQLCDS 420
           V+T D TPM L G+G I T +LSL NVYCIPKL +NLI VSQL DS
Sbjct: 283 VITXDSTPMPLAGVGSICTXYLSLFNVYCIPKLTMNLIFVSQLYDS 328



 Score = 30.0 bits (66), Expect(2) = 4e-11
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = +3

Query: 111 YLAVQSHAMFATSSVGLSSYEPSGIS*ST*VFDSGASHHMS 233
           ++ + S+AM   SS GL     S  S S  V DS  SHHMS
Sbjct: 225 HVEISSYAMSTPSSSGLPFPNISSKSSSLWVLDSXTSHHMS 265


>ref|XP_006376619.1| hypothetical protein POPTR_0012s01410g [Populus trichocarpa]
           gi|550326139|gb|ERP54416.1| hypothetical protein
           POPTR_0012s01410g [Populus trichocarpa]
          Length = 89

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 35/53 (66%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
 Frame = +1

Query: 283 VMTADDTPMSLVGIGPIVTPHLSLSNVYCIPKLKLNLISVSQLCDSG-YSVHF 438
           VMT DDTPM L G+G +VT HLSL N+Y I KL LNL SV QLCD G Y V F
Sbjct: 23  VMTTDDTPMHLTGVGSVVTLHLSLPNIYLILKLILNLASVGQLCDFGDYLVMF 75


>gb|ABA26965.1| TO22-2 [Taraxacum officinale]
          Length = 99

 Score = 49.3 bits (116), Expect(2) = 6e-09
 Identities = 23/39 (58%), Positives = 31/39 (79%)
 Frame = +1

Query: 283 VMTADDTPMSLVGIGPIVTPHLSLSNVYCIPKLKLNLIS 399
           V++A  TPMS+ G+G IVTP++SL++VY IP L LNL S
Sbjct: 61  VLSASATPMSVEGVGSIVTPYISLTDVYYIPTLALNLAS 99



 Score = 36.6 bits (83), Expect(2) = 6e-09
 Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = +3

Query: 108 RYLAVQSHAMFATSS-VGLSSYEPSGIS*ST*VFDSGASHHMS 233
           +++A    AM A+ S  GLSS   SGI  S  + DSGASHHMS
Sbjct: 2   QFIAANPTAMSASMSHSGLSSSNTSGIPSSLWILDSGASHHMS 44


>ref|XP_006380061.1| hypothetical protein POPTR_0008s20760g [Populus trichocarpa]
           gi|550333557|gb|ERP57858.1| hypothetical protein
           POPTR_0008s20760g [Populus trichocarpa]
          Length = 96

 Score = 60.1 bits (144), Expect(2) = 8e-09
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = +1

Query: 283 VMTADDTPMSLVGIGPIVTPHLSLSNVYCIPKLKLNL 393
           VMT DDTPM L G+G +V+PHLS SNVY IPKL+LNL
Sbjct: 59  VMTVDDTPMPLAGVGFVVSPHLSFSNVYLIPKLRLNL 95



 Score = 25.4 bits (54), Expect(2) = 8e-09
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 165 SYEPSGIS*ST*VFDSGASHHMS 233
           +Y  SG+S    V DSG SH+MS
Sbjct: 20  NYSSSGMSYFEWVLDSGVSHYMS 42


>ref|XP_006372009.1| hypothetical protein POPTR_0018s07320g [Populus trichocarpa]
           gi|550318265|gb|ERP49806.1| hypothetical protein
           POPTR_0018s07320g [Populus trichocarpa]
          Length = 280

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 31/46 (67%), Positives = 35/46 (76%)
 Frame = +1

Query: 283 VMTADDTPMSLVGIGPIVTPHLSLSNVYCIPKLKLNLISVSQLCDS 420
           V+TAD T M L G+G +VTPHLSL NVY I KL+LNL  V QLCDS
Sbjct: 221 VVTADGTLMPLAGVGSVVTPHLSLPNVYFISKLRLNLAFVGQLCDS 266


>ref|XP_006369694.1| hypothetical protein POPTR_0001s29110g [Populus trichocarpa]
           gi|550348444|gb|ERP66263.1| hypothetical protein
           POPTR_0001s29110g [Populus trichocarpa]
          Length = 123

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/46 (63%), Positives = 32/46 (69%)
 Frame = +1

Query: 283 VMTADDTPMSLVGIGPIVTPHLSLSNVYCIPKLKLNLISVSQLCDS 420
           VMT DDT M L  +  +VTPHL   NV+ IPKL LNL  VSQLCDS
Sbjct: 59  VMTTDDTLMPLTSVDSVVTPHLPHLNVFIIPKLTLNLAYVSQLCDS 104


>ref|XP_006375139.1| hypothetical protein POPTR_0014s04710g [Populus trichocarpa]
           gi|550323456|gb|ERP52936.1| hypothetical protein
           POPTR_0014s04710g [Populus trichocarpa]
          Length = 90

 Score = 45.8 bits (107), Expect(2) = 3e-06
 Identities = 25/40 (62%), Positives = 27/40 (67%)
 Frame = +1

Query: 283 VMTADDTPMSLVGIGPIVTPHLSLSNVYCIPKLKLNLISV 402
           VMT DDT M L  +G IVT HLSL +VY I KL LNL  V
Sbjct: 50  VMTIDDTLMPLASVGSIVTLHLSLPDVYLILKLALNLAYV 89



 Score = 31.2 bits (69), Expect(2) = 3e-06
 Identities = 17/35 (48%), Positives = 21/35 (60%)
 Frame = +3

Query: 135 MFATSSVGLSSYEPSGIS*ST*VFDSGASHHMSYD 239
           MFA+SS+    +   G+S    V DS ASHHMS D
Sbjct: 1   MFASSSIDQLPHSSLGMSHFKWVVDSSASHHMSPD 35