BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00053618
         (270 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004246883.1| PREDICTED: putative pentatricopeptide repeat...   120   3e-25
ref|XP_006341113.1| PREDICTED: putative pentatricopeptide repeat...   119   3e-25
ref|XP_002323645.2| pentatricopeptide repeat-containing family p...   119   3e-25
ref|XP_006361267.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24
ref|XP_006464333.1| PREDICTED: pentatricopeptide repeat-containi...   117   2e-24
ref|XP_007135766.1| hypothetical protein PHAVU_010G157000g [Phas...   117   2e-24
gb|EMT27537.1| Pentatricopeptide repeat-containing protein [Aegi...   117   2e-24
gb|EMS46161.1| hypothetical protein TRIUR3_10442 [Triticum urartu]    117   2e-24
ref|XP_004231236.1| PREDICTED: pentatricopeptide repeat-containi...   117   2e-24
ref|XP_006344297.1| PREDICTED: pentatricopeptide repeat-containi...   117   2e-24
ref|XP_006347856.1| PREDICTED: pentatricopeptide repeat-containi...   116   3e-24
ref|XP_007015003.1| Tetratricopeptide repeat-like superfamily pr...   116   3e-24
ref|XP_006376134.1| hypothetical protein POPTR_0013s10100g [Popu...   116   4e-24
ref|XP_002309169.1| pentatricopeptide repeat-containing family p...   116   4e-24
ref|XP_003533068.2| PREDICTED: putative pentatricopeptide repeat...   115   5e-24
ref|XP_002300388.2| hypothetical protein POPTR_0001s37860g [Popu...   115   5e-24
ref|XP_007207083.1| hypothetical protein PRUPE_ppa024338mg, part...   115   5e-24
ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containi...   115   5e-24
ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containi...   115   5e-24
ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containi...   115   5e-24

>ref|XP_004246883.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Solanum lycopersicum]
          Length = 688

 Score =  120 bits (300), Expect = 3e-25
 Identities = 51/88 (57%), Positives = 68/88 (77%)
 Frame = -3

Query: 265 GVKPNEVTFVGVLCACSHFGLVEMACQYFDSMTMVYGINPQIEHYGCMVDVLGRAGLLEE 86
           G+KPN  TF+G+LCAC+H GLV+   +YF SMT +Y + P IEHYGCMVD+LGRAGLL+E
Sbjct: 412 GIKPNGNTFIGLLCACTHAGLVDEGRKYFQSMTHLYSLEPSIEHYGCMVDLLGRAGLLDE 471

Query: 85  AVSFLKASPAKDNAILWGTILGACWIHR 2
           A S +++ P K NA++WG +L  C +HR
Sbjct: 472 AHSLIESMPMKANAVVWGALLSGCRLHR 499


>ref|XP_006341113.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Solanum tuberosum]
          Length = 687

 Score =  119 bits (299), Expect = 3e-25
 Identities = 51/88 (57%), Positives = 68/88 (77%)
 Frame = -3

Query: 265 GVKPNEVTFVGVLCACSHFGLVEMACQYFDSMTMVYGINPQIEHYGCMVDVLGRAGLLEE 86
           G+KPN  TF+G+LCAC+H GLV+   +YF SMT +Y + P IEHYGCMVD+LGRAGLL+E
Sbjct: 411 GIKPNGNTFIGLLCACTHAGLVDDGRKYFQSMTHLYSLEPAIEHYGCMVDLLGRAGLLDE 470

Query: 85  AVSFLKASPAKDNAILWGTILGACWIHR 2
           A S +++ P K NA++WG +L  C +HR
Sbjct: 471 AHSLIESMPMKANAVIWGALLSGCRLHR 498


>ref|XP_002323645.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550321449|gb|EEF05406.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 682

 Score =  119 bits (299), Expect = 3e-25
 Identities = 52/89 (58%), Positives = 69/89 (77%)
 Frame = -3

Query: 268 AGVKPNEVTFVGVLCACSHFGLVEMACQYFDSMTMVYGINPQIEHYGCMVDVLGRAGLLE 89
           +G+KP+  TFVG+LCAC+H GLVE   +YF+SM  VY + P+IEHYGCMVD+LGRAG L+
Sbjct: 405 SGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVYTLTPEIEHYGCMVDLLGRAGCLD 464

Query: 88  EAVSFLKASPAKDNAILWGTILGACWIHR 2
           EA   +K+ P + NAI+WG +LG C +HR
Sbjct: 465 EAHQLIKSMPMEANAIVWGALLGGCRLHR 493


>ref|XP_006361267.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Solanum tuberosum]
          Length = 536

 Score =  117 bits (294), Expect = 1e-24
 Identities = 50/88 (56%), Positives = 67/88 (76%)
 Frame = -3

Query: 265 GVKPNEVTFVGVLCACSHFGLVEMACQYFDSMTMVYGINPQIEHYGCMVDVLGRAGLLEE 86
           G+KP+ VTFVG+LC+CSH GLV +   YF  M +VYGI P IEHYGCM+D+LGR+G L+E
Sbjct: 263 GIKPDGVTFVGLLCSCSHSGLVSVGRSYFSEMKIVYGIEPGIEHYGCMIDLLGRSGCLQE 322

Query: 85  AVSFLKASPAKDNAILWGTILGACWIHR 2
           A+  +K+ P K NA++WG +L AC  H+
Sbjct: 323 ALELIKSMPMKPNAVVWGGLLRACHKHK 350


>ref|XP_006464333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Citrus sinensis]
          Length = 608

 Score =  117 bits (293), Expect = 2e-24
 Identities = 51/87 (58%), Positives = 66/87 (75%)
 Frame = -3

Query: 265 GVKPNEVTFVGVLCACSHFGLVEMACQYFDSMTMVYGINPQIEHYGCMVDVLGRAGLLEE 86
           G++P+EVTFVGVL ACSH GLVE  C++F  M+ VY + PQ EHYGCMVD+ GRAGL+ E
Sbjct: 421 GIEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIRE 480

Query: 85  AVSFLKASPAKDNAILWGTILGACWIH 5
           A+  +K+ P   +A +WG +LGAC IH
Sbjct: 481 ALDLIKSMPLVPDAFVWGALLGACKIH 507


>ref|XP_007135766.1| hypothetical protein PHAVU_010G157000g [Phaseolus vulgaris]
           gi|561008811|gb|ESW07760.1| hypothetical protein
           PHAVU_010G157000g [Phaseolus vulgaris]
          Length = 746

 Score =  117 bits (293), Expect = 2e-24
 Identities = 49/89 (55%), Positives = 68/89 (76%)
 Frame = -3

Query: 268 AGVKPNEVTFVGVLCACSHFGLVEMACQYFDSMTMVYGINPQIEHYGCMVDVLGRAGLLE 89
           A V P+E+T++GVLCAC+H G+VE    +F +MTM +GI P + HYGCMVD+LGRAG LE
Sbjct: 469 ASVTPDEITYIGVLCACTHAGMVEKGKSFFTAMTMQHGIKPNVTHYGCMVDLLGRAGHLE 528

Query: 88  EAVSFLKASPAKDNAILWGTILGACWIHR 2
           EA+  +   P K N+I+WG++LGAC +H+
Sbjct: 529 EAIEVIVNMPIKPNSIVWGSLLGACRVHK 557


>gb|EMT27537.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
          Length = 444

 Score =  117 bits (293), Expect = 2e-24
 Identities = 51/88 (57%), Positives = 71/88 (80%)
 Frame = -3

Query: 265 GVKPNEVTFVGVLCACSHFGLVEMACQYFDSMTMVYGINPQIEHYGCMVDVLGRAGLLEE 86
           G++PNE+TFVGVL AC+H GLV    +YF SMT V+G+ P++EHYGCMVD+LGRAG +EE
Sbjct: 168 GLQPNEITFVGVLMACTHVGLVSDGKKYFSSMTDVHGVVPRVEHYGCMVDLLGRAGHVEE 227

Query: 85  AVSFLKASPAKDNAILWGTILGACWIHR 2
           A+  +++ P + +AI+W T+LGAC IH+
Sbjct: 228 AMQLIRSMPFEPDAIIWRTLLGACRIHK 255


>gb|EMS46161.1| hypothetical protein TRIUR3_10442 [Triticum urartu]
          Length = 492

 Score =  117 bits (293), Expect = 2e-24
 Identities = 51/88 (57%), Positives = 71/88 (80%)
 Frame = -3

Query: 265 GVKPNEVTFVGVLCACSHFGLVEMACQYFDSMTMVYGINPQIEHYGCMVDVLGRAGLLEE 86
           G++PNE+TFVGVL AC+H GLV    +YF SMT V+G+ P++EHYGCMVD+LGRAG +EE
Sbjct: 216 GLQPNEITFVGVLIACTHVGLVSDGKKYFSSMTDVHGVVPRVEHYGCMVDLLGRAGHVEE 275

Query: 85  AVSFLKASPAKDNAILWGTILGACWIHR 2
           A+  +++ P + +AI+W T+LGAC IH+
Sbjct: 276 AMQLIRSMPFEPDAIIWRTLLGACRIHK 303


>ref|XP_004231236.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Solanum lycopersicum]
          Length = 844

 Score =  117 bits (293), Expect = 2e-24
 Identities = 50/87 (57%), Positives = 70/87 (80%)
 Frame = -3

Query: 265 GVKPNEVTFVGVLCACSHFGLVEMACQYFDSMTMVYGINPQIEHYGCMVDVLGRAGLLEE 86
           G+KPNEVT++ VL ACSH GLV+   +YFDSM++ +GI P++EHY CMVD+LGR+G LE+
Sbjct: 568 GIKPNEVTYIAVLSACSHVGLVDEGWKYFDSMSIDHGITPRMEHYACMVDLLGRSGSLEK 627

Query: 85  AVSFLKASPAKDNAILWGTILGACWIH 5
           AV F+K+ P   +A++W T+LGAC +H
Sbjct: 628 AVQFIKSLPLNVDALVWRTLLGACQVH 654


>ref|XP_006344297.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Solanum tuberosum]
          Length = 610

 Score =  117 bits (292), Expect = 2e-24
 Identities = 50/89 (56%), Positives = 69/89 (77%)
 Frame = -3

Query: 268 AGVKPNEVTFVGVLCACSHFGLVEMACQYFDSMTMVYGINPQIEHYGCMVDVLGRAGLLE 89
           +GV+P+ +TF+GVLCACSH GLV     YF++M   Y I P+IEHYGCMVD+LGRAGLLE
Sbjct: 416 SGVEPDGITFIGVLCACSHMGLVAEGFTYFNTMANAYSITPKIEHYGCMVDLLGRAGLLE 475

Query: 88  EAVSFLKASPAKDNAILWGTILGACWIHR 2
           +AV F++  P + +AI+W  +LGAC +++
Sbjct: 476 QAVKFVEKMPVQADAIIWTALLGACRVYK 504


>ref|XP_006347856.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Solanum tuberosum]
          Length = 849

 Score =  116 bits (291), Expect = 3e-24
 Identities = 50/87 (57%), Positives = 69/87 (79%)
 Frame = -3

Query: 265 GVKPNEVTFVGVLCACSHFGLVEMACQYFDSMTMVYGINPQIEHYGCMVDVLGRAGLLEE 86
           G+KPNEVT++ VL ACSH GLV+   +YFDSM+  +GI P++EHY CMVD+LGR+G LE+
Sbjct: 573 GIKPNEVTYIAVLSACSHVGLVDEGWKYFDSMSKNHGITPRMEHYACMVDLLGRSGSLEK 632

Query: 85  AVSFLKASPAKDNAILWGTILGACWIH 5
           AV F+K+ P   +A++W T+LGAC +H
Sbjct: 633 AVQFIKSLPLNVDALVWRTLLGACQVH 659


>ref|XP_007015003.1| Tetratricopeptide repeat-like superfamily protein, putative
           [Theobroma cacao] gi|508785366|gb|EOY32622.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative [Theobroma cacao]
          Length = 630

 Score =  116 bits (291), Expect = 3e-24
 Identities = 52/87 (59%), Positives = 66/87 (75%)
 Frame = -3

Query: 265 GVKPNEVTFVGVLCACSHFGLVEMACQYFDSMTMVYGINPQIEHYGCMVDVLGRAGLLEE 86
           GVKP++VTFVGVL ACSH GLVE   ++F+ M+ VY + PQ EHYGCMVD+LGRAGL+ E
Sbjct: 437 GVKPDDVTFVGVLSACSHAGLVEEGWKHFEDMSRVYNLQPQTEHYGCMVDLLGRAGLISE 496

Query: 85  AVSFLKASPAKDNAILWGTILGACWIH 5
           A  F+   P + +A +WG +LGAC IH
Sbjct: 497 AEEFIANMPIEPDAFVWGALLGACSIH 523


>ref|XP_006376134.1| hypothetical protein POPTR_0013s10100g [Populus trichocarpa]
           gi|550325404|gb|ERP53931.1| hypothetical protein
           POPTR_0013s10100g [Populus trichocarpa]
          Length = 636

 Score =  116 bits (290), Expect = 4e-24
 Identities = 51/87 (58%), Positives = 66/87 (75%)
 Frame = -3

Query: 265 GVKPNEVTFVGVLCACSHFGLVEMACQYFDSMTMVYGINPQIEHYGCMVDVLGRAGLLEE 86
           G+KP+EVTFVGVL ACSH GLV+   +YF+ M+ VY + PQ EHYGCMVD+LGRAGL+ E
Sbjct: 443 GIKPDEVTFVGVLSACSHAGLVKEGRRYFEDMSKVYNLEPQAEHYGCMVDLLGRAGLISE 502

Query: 85  AVSFLKASPAKDNAILWGTILGACWIH 5
           A  F++  P   +A +WG +LGAC +H
Sbjct: 503 AQEFIQNMPIAPDAFVWGALLGACKMH 529


>ref|XP_002309169.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222855145|gb|EEE92692.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 619

 Score =  116 bits (290), Expect = 4e-24
 Identities = 50/89 (56%), Positives = 69/89 (77%)
 Frame = -3

Query: 268 AGVKPNEVTFVGVLCACSHFGLVEMACQYFDSMTMVYGINPQIEHYGCMVDVLGRAGLLE 89
           +G++P+  TFVG+LCAC+H GLV+   QYF+SM  V+ + P+IEHYGCMVD+LGRAG L+
Sbjct: 342 SGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLD 401

Query: 88  EAVSFLKASPAKDNAILWGTILGACWIHR 2
           EA   +K+ P + NAI+WG +LG C +HR
Sbjct: 402 EAHQLVKSMPMEANAIVWGALLGGCRLHR 430


>ref|XP_003533068.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 738

 Score =  115 bits (289), Expect = 5e-24
 Identities = 49/89 (55%), Positives = 67/89 (75%)
 Frame = -3

Query: 268 AGVKPNEVTFVGVLCACSHFGLVEMACQYFDSMTMVYGINPQIEHYGCMVDVLGRAGLLE 89
           A + P+E+T++GVLCAC+H G+VE    +F SMTM +GI P + HYGCMVD+LGRAG LE
Sbjct: 461 ASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLE 520

Query: 88  EAVSFLKASPAKDNAILWGTILGACWIHR 2
           EA   +   P K N+I+WG++LGAC +H+
Sbjct: 521 EAHEVIVNMPVKPNSIVWGSLLGACRVHK 549


>ref|XP_002300388.2| hypothetical protein POPTR_0001s37860g [Populus trichocarpa]
           gi|550349131|gb|EEE85193.2| hypothetical protein
           POPTR_0001s37860g [Populus trichocarpa]
          Length = 595

 Score =  115 bits (289), Expect = 5e-24
 Identities = 50/88 (56%), Positives = 66/88 (75%)
 Frame = -3

Query: 265 GVKPNEVTFVGVLCACSHFGLVEMACQYFDSMTMVYGINPQIEHYGCMVDVLGRAGLLEE 86
           GVKPN VTF+G+L ACSH GL++   ++F SMT  YG+ PQIEHYGC+VD+  RAGLLEE
Sbjct: 319 GVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEE 378

Query: 85  AVSFLKASPAKDNAILWGTILGACWIHR 2
           A  F+ + P K N ++WG +LG C +H+
Sbjct: 379 AHEFILSMPIKPNGVVWGALLGGCKVHK 406


>ref|XP_007207083.1| hypothetical protein PRUPE_ppa024338mg, partial [Prunus persica]
           gi|462402725|gb|EMJ08282.1| hypothetical protein
           PRUPE_ppa024338mg, partial [Prunus persica]
          Length = 611

 Score =  115 bits (289), Expect = 5e-24
 Identities = 52/88 (59%), Positives = 65/88 (73%)
 Frame = -3

Query: 265 GVKPNEVTFVGVLCACSHFGLVEMACQYFDSMTMVYGINPQIEHYGCMVDVLGRAGLLEE 86
           G+ PN+VTFVG+L ACSH G V    ++F SMT  YGI P+IEHYGCMVD+L RAGLL+E
Sbjct: 335 GMDPNDVTFVGLLHACSHIGFVAQGREFFTSMTNDYGIVPRIEHYGCMVDLLSRAGLLQE 394

Query: 85  AVSFLKASPAKDNAILWGTILGACWIHR 2
           A  F+   P K N+I+WG +LG C +HR
Sbjct: 395 AYEFITNMPIKPNSIVWGALLGGCKVHR 422


>ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like, partial [Cucumis sativus]
          Length = 610

 Score =  115 bits (289), Expect = 5e-24
 Identities = 49/88 (55%), Positives = 66/88 (75%)
 Frame = -3

Query: 265 GVKPNEVTFVGVLCACSHFGLVEMACQYFDSMTMVYGINPQIEHYGCMVDVLGRAGLLEE 86
           G KP+ +TF+GVLC+C+H GLVE    YF+SM   Y I PQIEHYGCMVD+ GRAGLL+ 
Sbjct: 414 GEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDR 473

Query: 85  AVSFLKASPAKDNAILWGTILGACWIHR 2
           A+ F+K  P + +A++W  +LGAC I++
Sbjct: 474 AIEFVKRMPMEADAVIWAALLGACRIYK 501


>ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 583

 Score =  115 bits (289), Expect = 5e-24
 Identities = 51/88 (57%), Positives = 64/88 (72%)
 Frame = -3

Query: 265 GVKPNEVTFVGVLCACSHFGLVEMACQYFDSMTMVYGINPQIEHYGCMVDVLGRAGLLEE 86
           GVKPN VTF+G+L ACSH G+VE   +YF SMT  YGI P+IEHYGCMVD+  RAGLL+E
Sbjct: 341 GVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQE 400

Query: 85  AVSFLKASPAKDNAILWGTILGACWIHR 2
           A  F+   P   N ++WG +LG C +H+
Sbjct: 401 AHEFIMNMPIAPNGVVWGALLGGCKVHK 428


>ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 617

 Score =  115 bits (289), Expect = 5e-24
 Identities = 51/88 (57%), Positives = 64/88 (72%)
 Frame = -3

Query: 265 GVKPNEVTFVGVLCACSHFGLVEMACQYFDSMTMVYGINPQIEHYGCMVDVLGRAGLLEE 86
           GVKPN VTF+G+L ACSH G+VE   +YF SMT  YGI P+IEHYGCMVD+  RAGLL+E
Sbjct: 341 GVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQE 400

Query: 85  AVSFLKASPAKDNAILWGTILGACWIHR 2
           A  F+   P   N ++WG +LG C +H+
Sbjct: 401 AHEFIMNMPIAPNGVVWGALLGGCKVHK 428