BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00053591
         (594 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007221014.1| hypothetical protein PRUPE_ppa023643mg, part...   242   7e-62
ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containi...   223   3e-56
emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]   221   9e-56
ref|XP_002311156.2| hypothetical protein POPTR_0008s05220g [Popu...   206   3e-51
gb|EXB65293.1| hypothetical protein L484_025372 [Morus notabilis]     194   2e-47
ref|XP_006411188.1| hypothetical protein EUTSA_v10016248mg [Eutr...   184   2e-44
ref|XP_007139252.1| hypothetical protein PHAVU_008G013900g, part...   183   4e-44
ref|XP_002881665.1| pentatricopeptide repeat-containing protein ...   179   5e-43
ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containi...   179   7e-43
ref|XP_006848056.1| hypothetical protein AMTR_s00029p00196710 [A...   176   3e-42
ref|NP_181492.1| pentatricopeptide repeat-containing protein [Ar...   174   2e-41
ref|XP_004492098.1| PREDICTED: pentatricopeptide repeat-containi...   166   6e-39
ref|XP_003599019.1| Pentatricopeptide repeat-containing protein ...   151   2e-34
gb|EMT01370.1| hypothetical protein F775_14713 [Aegilops tauschii]    144   2e-32
ref|XP_006418855.1| hypothetical protein EUTSA_v10002433mg [Eutr...   144   2e-32
ref|XP_006844721.1| hypothetical protein AMTR_s00016p00252780 [A...   142   5e-32
ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containi...   139   5e-31
dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]    138   1e-30
ref|XP_002520500.1| pentatricopeptide repeat-containing protein,...   138   1e-30
ref|XP_006468953.1| PREDICTED: pentatricopeptide repeat-containi...   136   4e-30

>ref|XP_007221014.1| hypothetical protein PRUPE_ppa023643mg, partial [Prunus persica]
           gi|462417476|gb|EMJ22213.1| hypothetical protein
           PRUPE_ppa023643mg, partial [Prunus persica]
          Length = 888

 Score =  242 bits (617), Expect = 7e-62
 Identities = 123/198 (62%), Positives = 150/198 (75%)
 Frame = +1

Query: 1   RPFNSLAMATAPEITNLFSSKATIRHDYYSRLLRSCKDLNLLLKIHAHLVVSGLAQDDIT 180
           RP+++ A A A EI +L  S  T  +  Y  LL SC+DL  LL+IHAHL+VSGL QD+ T
Sbjct: 9   RPYHAFASAAASEIPSL-PSTTTNNYPRYLNLLSSCRDLKSLLQIHAHLIVSGLQQDNST 67

Query: 181 ITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRTNHNREALELYHRMLERGV 360
           +THL+NSYS F  S  A L+F++A+NPSVI WNSMIRAYTR N  +EA ++YH MLE+GV
Sbjct: 68  LTHLINSYSLFKKSGLASLVFDSAQNPSVILWNSMIRAYTRANKYKEARKMYHSMLEQGV 127

Query: 361 EVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLESDVFIGTGLIDMYCKLGEIDIARE 540
           E D YTF FVLKACT ALD +EGV VH E+AR+ L+SDVFIGT LIDMYCK+GE+  ARE
Sbjct: 128 EPDNYTFNFVLKACTAALDFEEGVLVHREVARKQLDSDVFIGTSLIDMYCKMGELTCARE 187

Query: 541 VFDEMPVLDVVAWNAMIS 594
           VFD +P  DVV  NAMI+
Sbjct: 188 VFDILPKKDVVVCNAMIA 205



 Score =  101 bits (251), Expect = 2e-19
 Identities = 56/171 (32%), Positives = 92/171 (53%), Gaps = 4/171 (2%)
 Frame = +1

Query: 94  LLRSCKDLNLLL---KIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPS 264
           +L +C +L+ L     IH + V   +A D    T LV+ Y+  G   SA ++FN      
Sbjct: 438 VLSACAELSYLKLGKSIHCYAVKGNIASDISLGTALVSMYAKCGFFTSALILFNRMPCKD 497

Query: 265 VISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHC 444
           V++WN++I AYT+      A++++H +   G++ D  +    + AC+   DL +G  +H 
Sbjct: 498 VVTWNALINAYTQIGDAFHAIDMFHELWSSGIKPDAGSMVGFMSACSILNDLDQGTCIHG 557

Query: 445 EIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVL-DVVAWNAMIS 594
           +I + G E DV +   LI MYCK G I  A  +F+    + DVV+WN +I+
Sbjct: 558 QIIKHGFEHDVPVKNALIGMYCKCGNIYSAELLFNRTKFMKDVVSWNVIIA 608



 Score = 95.9 bits (237), Expect = 8e-18
 Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
 Frame = +1

Query: 112  DLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAE-NPSVISWNSMI 288
            DL+    IH  ++  G   D      L+  Y   GN  SA L+FN  +    V+SWN +I
Sbjct: 548  DLDQGTCIHGQIIKHGFEHDVPVKNALIGMYCKCGNIYSAELLFNRTKFMKDVVSWNVII 607

Query: 289  RAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLE 468
              Y +  +  EA+  +H+M     + +  TF  +L A      L+EG+  H  I + G  
Sbjct: 608  AGYMQGGYASEAICSFHQMKLENFQPNIVTFVSILPAVAYLAALREGMAFHACIIQTGFL 667

Query: 469  SDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
            S+  +G GLIDMY K G+++ + + F+EM   D V+WNAM++
Sbjct: 668  SNTLVGNGLIDMYSKCGQLNYSEKCFNEMEHKDKVSWNAMLA 709



 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 48/161 (29%), Positives = 91/161 (56%)
 Frame = +1

Query: 112 DLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIR 291
           D++  + IH ++   G +   +    L++ YS  G+ D+AR +F+  ++   +SW +M+ 
Sbjct: 247 DIDSCMCIHGYVFRRGFSS--VFSNGLIDMYSKCGDVDAARQVFDLMQDRDDVSWGTMMA 304

Query: 292 AYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLES 471
            Y       E LEL+  M     +++K T    L A T   D ++G ++H   +++ L+S
Sbjct: 305 GYASNGLFVEVLELFDWMKGDNTKMNKVTIISTLLAATEMRDSEKGKEIHFCASQQELDS 364

Query: 472 DVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           DV + T ++ MY K GEI+ A+++F+ +   D+V+W+A+IS
Sbjct: 365 DVSVATSILTMYAKCGEIEKAKQIFEGLRKRDLVSWSALIS 405



 Score = 85.9 bits (211), Expect = 8e-15
 Identities = 47/155 (30%), Positives = 74/155 (47%)
 Frame = +1

Query: 130 KIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRTN 309
           +IH       L  D    T ++  Y+  G  + A+ IF       ++SW+++I A  ++ 
Sbjct: 352 EIHFCASQQELDSDVSVATSILTMYAKCGEIEKAKQIFEGLRKRDLVSWSALISACVQSG 411

Query: 310 HNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLESDVFIGT 489
           +   AL L+       ++    T   VL AC     LK G  +HC   +  + SD+ +GT
Sbjct: 412 YPEVALSLFRDKQNEILKPSGITLISVLSACAELSYLKLGKSIHCYAVKGNIASDISLGT 471

Query: 490 GLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
            L+ MY K G    A  +F+ MP  DVV WNA+I+
Sbjct: 472 ALVSMYAKCGFFTSALILFNRMPCKDVVTWNALIN 506



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 3/173 (1%)
 Frame = +1

Query: 85  YSRLLRSCK---DLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAE 255
           ++ +L++C    D    + +H  +    L  D    T L++ Y   G    AR +F+   
Sbjct: 134 FNFVLKACTAALDFEEGVLVHREVARKQLDSDVFIGTSLIDMYCKMGELTCAREVFDILP 193

Query: 256 NPSVISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQ 435
              V+  N+MI   +++    EALE +  +   G+E +  +   ++ A +   D+   + 
Sbjct: 194 KKDVVVCNAMIAGLSQSEDPYEALEFFRGIQLWGLEPNLVSLLNLVPAVSRLADIDSCMC 253

Query: 436 VHCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           +H  + RRG  S      GLIDMY K G++D AR+VFD M   D V+W  M++
Sbjct: 254 IHGYVFRRGFSS--VFSNGLIDMYSKCGDVDAARQVFDLMQDRDDVSWGTMMA 304



 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 43/157 (27%), Positives = 78/157 (49%), Gaps = 2/157 (1%)
 Frame = +1

Query: 127  LKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRT 306
            +  HA ++ +G   + +    L++ YS  G  + +   FN  E+   +SWN+M+ AY   
Sbjct: 655  MAFHACIIQTGFLSNTLVGNGLIDMYSKCGQLNYSEKCFNEMEHKDKVSWNAMLAAYAVH 714

Query: 307  NHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEI-ARRGLESDVFI 483
                +A+ L+  M E  V+VD  +F  VL AC  A  +KEG ++   +  +  LE ++  
Sbjct: 715  GQGVDAVSLFSLMEESLVQVDSVSFISVLSACRHAGLVKEGKKIFQAMHEKHHLEPELEH 774

Query: 484  GTGLIDMYCKLGEIDIAREVFDEMPVL-DVVAWNAMI 591
               ++D+  + G  D    + + MPV+ D   W A++
Sbjct: 775  YACMVDLLSRAGLFDETLNLINTMPVVPDAGVWGALL 811


>ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Vitis vinifera]
          Length = 1005

 Score =  223 bits (568), Expect = 3e-56
 Identities = 120/198 (60%), Positives = 146/198 (73%)
 Frame = +1

Query: 1   RPFNSLAMATAPEITNLFSSKATIRHDYYSRLLRSCKDLNLLLKIHAHLVVSGLAQDDIT 180
           R F S+A A A E  +L SS  T  + +Y RLL SCK LN LL+IHA ++VSG      +
Sbjct: 9   RSFTSIATA-ASEFPSLSSSTYT-NYLHYPRLLSSCKHLNPLLQIHAQIIVSGFKHHH-S 65

Query: 181 ITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRTNHNREALELYHRMLERGV 360
           ITHL+N YS F   D AR +F++  NPS I WNSMIRAYTR+    EALE+Y+ M+E+G+
Sbjct: 66  ITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGL 125

Query: 361 EVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLESDVFIGTGLIDMYCKLGEIDIARE 540
           E DKYTFTFVLKACTGAL+L+EGV  H EI RRGLE DVFIG GL+DMY K+G++  ARE
Sbjct: 126 EPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRARE 185

Query: 541 VFDEMPVLDVVAWNAMIS 594
           VFD+MP  DVVAWNAMI+
Sbjct: 186 VFDKMPKRDVVAWNAMIA 203



 Score =  100 bits (249), Expect = 3e-19
 Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
 Frame = +1

Query: 112  DLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAE-NPSVISWNSMI 288
            DL+    IH  +V  G   D      L++ Y+  G+  SA  +FN  +     ++WN +I
Sbjct: 546  DLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVII 605

Query: 289  RAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLE 468
             AY +  H +EA+  +H+M       +  TF  VL A       +EG+  H  I + G  
Sbjct: 606  AAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFL 665

Query: 469  SDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
            S+  +G  LIDMY K G++D + ++F+EM   D V+WNAM+S
Sbjct: 666  SNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLS 707



 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 46/161 (28%), Positives = 83/161 (51%)
 Frame = +1

Query: 112 DLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIR 291
           DL    +IH   +   +  D +  T L+  Y+  G ++ A+ +F   +   +++W+++I 
Sbjct: 344 DLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIA 403

Query: 292 AYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLES 471
           A  +T +  EAL L+  M  + ++ ++ T   +L AC     LK G  +HC   +  ++S
Sbjct: 404 ALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDS 463

Query: 472 DVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           D+  GT L+ MY K G    A   F+ M   D+V WN++I+
Sbjct: 464 DLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLIN 504



 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 4/171 (2%)
 Frame = +1

Query: 94  LLRSCKDLNLLL---KIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPS 264
           +L +C DL+LL     IH   V + +  D  T T LV+ Y+  G   +A   FN   +  
Sbjct: 436 ILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRD 495

Query: 265 VISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHC 444
           +++WNS+I  Y +      A+++++++    +  D  T   V+ AC    DL +G  +H 
Sbjct: 496 IVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHG 555

Query: 445 EIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMP-VLDVVAWNAMIS 594
            I + G ESD  +   LIDMY K G +  A  +F++     D V WN +I+
Sbjct: 556 LIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIA 606



 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 41/135 (30%), Positives = 76/135 (56%)
 Frame = +1

Query: 190 LVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRTNHNREALELYHRMLERGVEVD 369
           L++ YS  G+ D AR +F+   +   +SW +M+  Y       E LEL+ +M    V ++
Sbjct: 269 LIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRIN 328

Query: 370 KYTFTFVLKACTGALDLKEGVQVHCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFD 549
           K +      A    +DL++G ++H    ++ ++SD+ + T L+ MY K GE + A+++F 
Sbjct: 329 KVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFW 388

Query: 550 EMPVLDVVAWNAMIS 594
            +   D+VAW+A+I+
Sbjct: 389 GLQGRDLVAWSAIIA 403



 Score = 79.3 bits (194), Expect = 7e-13
 Identities = 51/173 (29%), Positives = 87/173 (50%), Gaps = 3/173 (1%)
 Frame = +1

Query: 85  YSRLLRSCKD-LNLLLKI--HAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAE 255
           ++ +L++C   LNL   +  H  +   GL +D      LV+ YS  G+   AR +F+   
Sbjct: 132 FTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMP 191

Query: 256 NPSVISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQ 435
              V++WN+MI   +++    EA++ +  M   GVE    +   +        +++    
Sbjct: 192 KRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRS 251

Query: 436 VHCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           +H  + RR   S V    GLID+Y K G++D+AR VFD+M   D V+W  M++
Sbjct: 252 IHGYVFRRDFSSAV--SNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMA 302



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 2/157 (1%)
 Frame = +1

Query: 127  LKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRT 306
            +  HA ++  G   + +    L++ Y+  G  D +  +FN  ++   +SWN+M+  Y   
Sbjct: 653  MAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVH 712

Query: 307  NHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQV-HCEIARRGLESDVFI 483
             H   A+ L+  M E  V++D  +F  VL AC  A  ++EG ++ H    +  ++ D+  
Sbjct: 713  GHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEH 772

Query: 484  GTGLIDMYCKLGEIDIAREVFDEMPV-LDVVAWNAMI 591
               ++D+  + G  D        MPV  D   W A++
Sbjct: 773  YACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALL 809


>emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  221 bits (564), Expect = 9e-56
 Identities = 119/198 (60%), Positives = 145/198 (73%)
 Frame = +1

Query: 1   RPFNSLAMATAPEITNLFSSKATIRHDYYSRLLRSCKDLNLLLKIHAHLVVSGLAQDDIT 180
           R F S+A   A E  +L SS  T  + +Y RLL SCK LN LL+IHA ++VSG      +
Sbjct: 9   RSFTSIA-TXASEFPSLSSSTYT-NYLHYPRLLSSCKHLNPLLQIHAQIIVSGFKHHH-S 65

Query: 181 ITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRTNHNREALELYHRMLERGV 360
           ITHL+N YS F   D AR +F++  NPS I WNSMIRAYTR+    EALE+Y+ M+E+G+
Sbjct: 66  ITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGL 125

Query: 361 EVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLESDVFIGTGLIDMYCKLGEIDIARE 540
           E DKYTFTFVLKACTGAL+L+EGV  H EI RRGLE DVFIG GL+DMY K+G++  ARE
Sbjct: 126 EPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRARE 185

Query: 541 VFDEMPVLDVVAWNAMIS 594
           VFD+MP  DVVAWNAMI+
Sbjct: 186 VFDKMPKRDVVAWNAMIA 203



 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 53/162 (32%), Positives = 83/162 (51%), Gaps = 1/162 (0%)
 Frame = +1

Query: 112  DLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAE-NPSVISWNSMI 288
            DL+    IH  +V  G   D      L++ Y+  G+  SA  +FN  +     ++WN +I
Sbjct: 546  DLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVII 605

Query: 289  RAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLE 468
             AY +  H +EA+  +H+M       +  TF  VL A       +EG+  H  I + G  
Sbjct: 606  AAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFL 665

Query: 469  SDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
            S+  +G  LIDMY K G++  + ++F+EM   D V+WNAM+S
Sbjct: 666  SNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLS 707



 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 46/161 (28%), Positives = 83/161 (51%)
 Frame = +1

Query: 112 DLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIR 291
           DL    +IH   +   +  D +  T L+  Y+  G ++ A+ +F   +   +++W+++I 
Sbjct: 344 DLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIA 403

Query: 292 AYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLES 471
           A  +T +  EAL L+  M  + ++ ++ T   +L AC     LK G  +HC   +  ++S
Sbjct: 404 ALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDS 463

Query: 472 DVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           D+  GT L+ MY K G    A   F+ M   D+V WN++I+
Sbjct: 464 DLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLIN 504



 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 4/171 (2%)
 Frame = +1

Query: 94  LLRSCKDLNLLL---KIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPS 264
           +L +C DL+LL     IH   V + +  D  T T LV+ Y+  G   +A   FN   +  
Sbjct: 436 ILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRD 495

Query: 265 VISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHC 444
           +++WNS+I  Y +      A+++++++    +  D  T   V+ AC    DL +G  +H 
Sbjct: 496 IVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHG 555

Query: 445 EIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMP-VLDVVAWNAMIS 594
            I + G ESD  +   LIDMY K G +  A  +F++     D V WN +I+
Sbjct: 556 LIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIA 606



 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 41/135 (30%), Positives = 76/135 (56%)
 Frame = +1

Query: 190 LVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRTNHNREALELYHRMLERGVEVD 369
           L++ YS  G+ D AR +F+   +   +SW +M+  Y       E LEL+ +M    V ++
Sbjct: 269 LIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRIN 328

Query: 370 KYTFTFVLKACTGALDLKEGVQVHCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFD 549
           K +      A    +DL++G ++H    ++ ++SD+ + T L+ MY K GE + A+++F 
Sbjct: 329 KVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFW 388

Query: 550 EMPVLDVVAWNAMIS 594
            +   D+VAW+A+I+
Sbjct: 389 GLQGRDLVAWSAIIA 403



 Score = 79.3 bits (194), Expect = 7e-13
 Identities = 51/173 (29%), Positives = 87/173 (50%), Gaps = 3/173 (1%)
 Frame = +1

Query: 85  YSRLLRSCKD-LNLLLKI--HAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAE 255
           ++ +L++C   LNL   +  H  +   GL +D      LV+ YS  G+   AR +F+   
Sbjct: 132 FTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMP 191

Query: 256 NPSVISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQ 435
              V++WN+MI   +++    EA++ +  M   GVE    +   +        +++    
Sbjct: 192 KRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRS 251

Query: 436 VHCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           +H  + RR   S V    GLID+Y K G++D+AR VFD+M   D V+W  M++
Sbjct: 252 IHGYVFRRDFSSAV--SNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMA 302



 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 2/157 (1%)
 Frame = +1

Query: 127  LKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRT 306
            +  HA ++  G   + +    L++ Y+  G    +  +FN  ++   +SWN+M+  Y   
Sbjct: 653  MAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVH 712

Query: 307  NHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQV-HCEIARRGLESDVFI 483
             H   A+ L+  M E  V++D  +F  VL AC     ++EG ++ H    +  ++ D+  
Sbjct: 713  GHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEH 772

Query: 484  GTGLIDMYCKLGEIDIAREVFDEMPV-LDVVAWNAMI 591
               ++D+  + G  D        MPV  D   W A++
Sbjct: 773  YACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALL 809


>ref|XP_002311156.2| hypothetical protein POPTR_0008s05220g [Populus trichocarpa]
           gi|550332465|gb|EEE88523.2| hypothetical protein
           POPTR_0008s05220g [Populus trichocarpa]
          Length = 878

 Score =  206 bits (525), Expect = 3e-51
 Identities = 100/169 (59%), Positives = 128/169 (75%)
 Frame = +1

Query: 85  YSRLLRSCKDLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPS 264
           Y  LL SCK LN LL+IH  L VSGL  D +T  HL+ SY  F   + AR +F++  NPS
Sbjct: 36  YVSLLSSCKTLNSLLQIHVRLTVSGLQNDHLTNAHLIKSYLLFLKCNYARFLFDSLPNPS 95

Query: 265 VISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHC 444
           V+ +NS+IRAY+RT +++EA+ +YH ML +G+E DKYTFTFVLKACTGAL  KEG+ VH 
Sbjct: 96  VMLYNSIIRAYSRTKNHQEAINIYHCMLNKGLEPDKYTFTFVLKACTGALYFKEGILVHK 155

Query: 445 EIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMI 591
           +I  RGLE D FIGT L+DMYCK+G++ +AR+VFD+MP  DVVAW+AMI
Sbjct: 156 DIIVRGLERDAFIGTSLVDMYCKMGDLKLARKVFDKMPEKDVVAWSAMI 204



 Score =  101 bits (251), Expect = 2e-19
 Identities = 48/155 (30%), Positives = 83/155 (53%)
 Frame = +1

Query: 130 KIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRTN 309
           +IH      G+  D    T ++  Y+  G  D+A+ +F   +   +++W+++I A+ ++ 
Sbjct: 352 EIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIAAFVQSG 411

Query: 310 HNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLESDVFIGT 489
           + +EAL L+  M   G++ +K      L AC     LK G  +HC   +  ++ D+ +GT
Sbjct: 412 YPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVDLDISVGT 471

Query: 490 GLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
            L+ MY K G   +A  +F+ MP  DVV WNAMI+
Sbjct: 472 ALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMIN 506



 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 51/161 (31%), Positives = 86/161 (53%)
 Frame = +1

Query: 112 DLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIR 291
           D++    IH +++  G   D I    L++ YS  GN D  R IF    +   +SW +M+ 
Sbjct: 247 DIDACRCIHGYVIRRGF--DAIVSNGLIDMYSKSGNIDVGRQIFEYMPDKDDVSWGTMMA 304

Query: 292 AYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLES 471
            Y  +    E LEL+ R     V ++K + T  L A      L  G ++H    ++G++S
Sbjct: 305 GYAHSGCFLEVLELFDRGRGENVRMNKVSVTSALTAAAEMRALGRGTEIHDFARQQGIDS 364

Query: 472 DVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           DV + T ++ MY + GE+D A+++F E+   D+VAW+A+I+
Sbjct: 365 DVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIA 405



 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 47/154 (30%), Positives = 79/154 (51%)
 Frame = +1

Query: 133 IHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRTNH 312
           +H  ++V GL +D    T LV+ Y   G+   AR +F+      V++W++MI   +++  
Sbjct: 153 VHKDIIVRGLERDAFIGTSLVDMYCKMGDLKLARKVFDKMPEKDVVAWSAMILGLSQSED 212

Query: 313 NREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLESDVFIGTG 492
             E       M   GVE++  +   ++ A +   D+     +H  + RRG   D  +  G
Sbjct: 213 PNEVFGFIRSMQLSGVELNLVSILNLVPAVSRLGDIDACRCIHGYVIRRGF--DAIVSNG 270

Query: 493 LIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           LIDMY K G ID+ R++F+ MP  D V+W  M++
Sbjct: 271 LIDMYSKSGNIDVGRQIFEYMPDKDDVSWGTMMA 304



 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 1/155 (0%)
 Frame = +1

Query: 133  IHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAE-NPSVISWNSMIRAYTRTN 309
            IH  ++  G   +    T L++ Y+  G+   A  +F+        +SWN MI  Y  + 
Sbjct: 555  IHGKIIKCGFESECHVKTALIDMYAKCGSLSGAEFLFHRTGCRKDEVSWNVMIAGYMHSG 614

Query: 310  HNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLESDVFIGT 489
            H  +A   + +M    ++ +  T   VL A      L+ G+ +H  + R G +S   +G 
Sbjct: 615  HAIDAFSAFCQMKLENIQPNIVTIVTVLPAVAHLSALRAGMTLHAYVIRMGFQSKTPVGN 674

Query: 490  GLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
             LIDMY K G +D + ++F EM   D V+WN M++
Sbjct: 675  CLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVMLA 709



 Score = 75.9 bits (185), Expect = 8e-12
 Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
 Frame = +1

Query: 115 LNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRA 294
           L L   +H   V + +  D    T LV+ Y+  G    A  +FN      V++WN+MI  
Sbjct: 448 LKLGKSMHCCAVKANVDLDISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMING 507

Query: 295 YTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLESD 474
           Y +      ALE++H++    +  +  T   +L A     DL +G  +H +I + G ES+
Sbjct: 508 YAQIGEPFPALEMFHKLQLSELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESE 567

Query: 475 VFIGTGLIDMYCKLGEIDIAREVFDEMPV-LDVVAWNAMIS 594
             + T LIDMY K G +  A  +F       D V+WN MI+
Sbjct: 568 CHVKTALIDMYAKCGSLSGAEFLFHRTGCRKDEVSWNVMIA 608



 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 39/157 (24%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
 Frame = +1

Query: 127  LKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRT 306
            + +HA+++  G          L++ Y+  G  D +  IF+  +N   +SWN M+  Y   
Sbjct: 655  MTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVMLAGYAVH 714

Query: 307  NHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARR-GLESDVFI 483
                 A+EL+ RM +  + +D ++F  VL AC  A  + EG ++   ++++  LE D+  
Sbjct: 715  GRGSCAIELFSRMQDSEIRLDSFSFINVLSACRHAGLIGEGRKIFDSMSKQHQLEPDLEH 774

Query: 484  GTGLIDMYCKLGEIDIAREVFDEMPV-LDVVAWNAMI 591
               + D+  + G  +   ++   MP+  D   W A++
Sbjct: 775  YACMADLLGRAGLFNEVLDLIKSMPMEPDAGVWGALL 811


>gb|EXB65293.1| hypothetical protein L484_025372 [Morus notabilis]
          Length = 869

 Score =  194 bits (493), Expect = 2e-47
 Identities = 99/167 (59%), Positives = 121/167 (72%)
 Frame = +1

Query: 94  LLRSCKDLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVIS 273
           LL SCK L  LL+IH HL+VS    D  T T L+N+YS F   D    +F++  NP+VI 
Sbjct: 30  LLNSCKQLKPLLQIHGHLIVSRHKNDTHTATRLINAYSFFRKCDVCHSVFDSTPNPAVIL 89

Query: 274 WNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIA 453
           WNSMIRAY R+N   +AL +Y  ML+ G+E DKYTF FV+KACTG+LDL+EGV +H EIA
Sbjct: 90  WNSMIRAYVRSNRFGDALGMYRSMLKEGMEPDKYTFNFVVKACTGSLDLQEGVLIHREIA 149

Query: 454 RRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
            RGLESDVFIGT L+ MY K+GEI +A +VFD MP  DVVA NAMI+
Sbjct: 150 LRGLESDVFIGTSLLYMYSKMGEIRLALQVFDGMPEKDVVACNAMIT 196



 Score =  105 bits (261), Expect = 1e-20
 Identities = 57/201 (28%), Positives = 108/201 (53%), Gaps = 4/201 (1%)
 Frame = +1

Query: 4    PFNSLAMATAPEITNLFSSKATIRHDYYSRLLRSCKDLNLLLK---IHAHLVVSGLAQDD 174
            PF+++ M    +++ +   + T+       L+++C  LN L +   IH  ++  GL  D+
Sbjct: 505  PFHAMEMFRKLQLSGIQPDERTM-----VALVQACILLNDLGQGACIHGKIIKYGLESDN 559

Query: 175  ITITHLVNSYSSFGNSDSARLIFNNAE-NPSVISWNSMIRAYTRTNHNREALELYHRMLE 351
              I  L+  Y+  G+  SA  +FN  E   + ++WN++I  Y ++ H +EA+  +++M  
Sbjct: 560  HVINSLIGMYAKCGSLPSADFLFNRIELTKNEVAWNALISGYAQSKHAKEAISAFNQMRL 619

Query: 352  RGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLESDVFIGTGLIDMYCKLGEIDI 531
              V  +  TF  +L A     DL+ G+  H  + + G+ S+  +G  LIDMY K G +D 
Sbjct: 620  ENVRPNSVTFVSILPAVAYLSDLRLGMAFHASLIKMGVLSNTLVGNSLIDMYAKCGRLDF 679

Query: 532  AREVFDEMPVLDVVAWNAMIS 594
            +++ F++M   + V+WN M++
Sbjct: 680  SKKCFNDMEHKNTVSWNVMLA 700



 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 52/173 (30%), Positives = 93/173 (53%), Gaps = 4/173 (2%)
 Frame = +1

Query: 88  SRLLRSCKDLNLLL---KIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAEN 258
           S +L +C +L+ +     IH H + + +         LV+ Y+ FG   +A  +F+   +
Sbjct: 427 SSILSACAELSSIRLGRSIHCHTIKANIDCGISIGAALVSMYAKFGFLTTALFVFHRMPS 486

Query: 259 PSVISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQV 438
             V++WNS+I   T+      A+E++ ++   G++ D+ T   +++AC    DL +G  +
Sbjct: 487 KDVVAWNSLINVCTQIGEPFHAMEMFRKLQLSGIQPDERTMVALVQACILLNDLGQGACI 546

Query: 439 HCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVL-DVVAWNAMIS 594
           H +I + GLESD  +   LI MY K G +  A  +F+ + +  + VAWNA+IS
Sbjct: 547 HGKIIKYGLESDNHVINSLIGMYAKCGSLPSADFLFNRIELTKNEVAWNALIS 599



 Score = 86.7 bits (213), Expect = 5e-15
 Identities = 43/155 (27%), Positives = 79/155 (50%)
 Frame = +1

Query: 130 KIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRTN 309
           +IH+  V  G+  +    T ++  Y+  G  + A+ +F+      VI+ +++  A+  + 
Sbjct: 343 EIHSCAVQEGIDSNVSVATSIMTMYAKCGEIEKAKELFDGLHGKDVIAHSALTSAFVDSG 402

Query: 310 HNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLESDVFIGT 489
           +  EAL L+       +++D  T + +L AC     ++ G  +HC   +  ++  + IG 
Sbjct: 403 YFEEALSLFQDSQNEYLKLDWVTISSILSACAELSSIRLGRSIHCHTIKANIDCGISIGA 462

Query: 490 GLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
            L+ MY K G +  A  VF  MP  DVVAWN++I+
Sbjct: 463 ALVSMYAKFGFLTTALFVFHRMPSKDVVAWNSLIN 497



 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 41/135 (30%), Positives = 76/135 (56%)
 Frame = +1

Query: 190 LVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRTNHNREALELYHRMLERGVEVD 369
           L++ YS  G+   AR +F+  +    ISW +M+  Y    +  E LEL+  +    ++++
Sbjct: 262 LIDMYSKCGDVSVARRVFDTMKGRDNISWGTMMAGYLYNGYFLEVLELFDSVKGENLKMN 321

Query: 370 KYTFTFVLKACTGALDLKEGVQVHCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFD 549
             +    L A T   +L++G ++H    + G++S+V + T ++ MY K GEI+ A+E+FD
Sbjct: 322 AVSVISALLAATELRNLEKGKEIHSCAVQEGIDSNVSVATSIMTMYAKCGEIEKAKELFD 381

Query: 550 EMPVLDVVAWNAMIS 594
            +   DV+A +A+ S
Sbjct: 382 GLHGKDVIAHSALTS 396



 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 47/161 (29%), Positives = 80/161 (49%)
 Frame = +1

Query: 112 DLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIR 291
           DL   + IH  + + GL  D    T L+  YS  G    A  +F+      V++ N+MI 
Sbjct: 137 DLQEGVLIHREIALRGLESDVFIGTSLLYMYSKMGEIRLALQVFDGMPEKDVVACNAMIT 196

Query: 292 AYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLES 471
            ++++    +ALE +  M   G+E +  +   +++A +   D+     +H    RR + +
Sbjct: 197 GFSQSGDPCKALEFFRSMQLWGLEPNSVSLLNLVRAVSVLADIDSCRSIHGYAVRRDVGA 256

Query: 472 DVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
            V    GLIDMY K G++ +AR VFD M   D ++W  M++
Sbjct: 257 AV--SNGLIDMYSKCGDVSVARRVFDTMKGRDNISWGTMMA 295



 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 2/162 (1%)
 Frame = +1

Query: 112  DLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIR 291
            DL L +  HA L+  G+  + +    L++ Y+  G  D ++  FN+ E+ + +SWN M+ 
Sbjct: 641  DLRLGMAFHASLIKMGVLSNTLVGNSLIDMYAKCGRLDFSKKCFNDMEHKNTVSWNVMLA 700

Query: 292  AYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEI-ARRGLE 468
             Y        A+ L+  M E  VEVD ++F  VL AC  A  ++EG ++   I  +  LE
Sbjct: 701  GYAVHGRGDSAVSLFSLMQENHVEVDNFSFVSVLSACRHAGLVEEGKRIFKSIREKHHLE 760

Query: 469  SDVFIGTGLIDMYCKLGEIDIAREVFDEMPV-LDVVAWNAMI 591
             ++     ++D+  + G  D A  +   MP+  D   W A++
Sbjct: 761  PNLEHYACVVDLLGRAGLFDEALSLISTMPMEPDAGVWGALL 802


>ref|XP_006411188.1| hypothetical protein EUTSA_v10016248mg [Eutrema salsugineum]
           gi|557112357|gb|ESQ52641.1| hypothetical protein
           EUTSA_v10016248mg [Eutrema salsugineum]
          Length = 836

 Score =  184 bits (466), Expect = 2e-44
 Identities = 90/169 (53%), Positives = 120/169 (71%), Gaps = 1/169 (0%)
 Frame = +1

Query: 91  RLLRSCKDLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVI 270
           R LR CK+L  LL+IH  L+VSGL   +     LVN+YS F   D +R+IFN+  +P V+
Sbjct: 10  RKLRECKNLRFLLQIHGSLIVSGLKPHN----QLVNAYSLFQRPDLSRIIFNSVRDPGVV 65

Query: 271 SWNSMIRAYTRTNHNREALELYHRMLER-GVEVDKYTFTFVLKACTGALDLKEGVQVHCE 447
            WNSMIR YTR   +REALE +  M E  G++ DKYTFTF LKAC G++DL+EG+++H  
Sbjct: 66  LWNSMIRGYTRAGLHREALEFFGYMSEEIGMDPDKYTFTFALKACAGSMDLEEGLRIHGL 125

Query: 448 IARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           I+  G ESDV+IGT L++MYCK G++  AR+VFD+MP  D+V WN M+S
Sbjct: 126 ISEMGFESDVYIGTALVEMYCKAGDLISARQVFDKMPEKDIVTWNIMVS 174



 Score = 99.4 bits (246), Expect = 7e-19
 Identities = 51/159 (32%), Positives = 85/159 (53%)
 Frame = +1

Query: 112 DLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIR 291
           DL   + IH ++V  G+  D    T L++ YS  G  + A  +F N ++  V+SW++MI 
Sbjct: 315 DLEKGIAIHEYVVQQGMIGDISVATSLMSMYSKCGELEIAEQLFINIKDRDVVSWSAMIA 374

Query: 292 AYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLES 471
           ++ +  H+ +AL L+  M+   V+ +  T T VL AC G    + G  +HC   +  +ES
Sbjct: 375 SFVQVGHHDDALSLFRDMISIPVKPNAVTLTSVLPACAGIAASRLGKSIHCYAIKADMES 434

Query: 472 DVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAM 588
            +   T +I MY K G    A +  + +P+ D VA+NA+
Sbjct: 435 GLATATAIISMYAKSGLFSPALKAIERLPIKDAVAFNAL 473



 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 43/135 (31%), Positives = 73/135 (54%)
 Frame = +1

Query: 190 LVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRTNHNREALELYHRMLERGVEVD 369
           L++ Y    +  +A  IF+        SW +M+ AY       E LEL+  M    V ++
Sbjct: 240 LIDMYCKCADLYAAECIFDEVLCKDDSSWGTMMAAYAHNGFFEEVLELFDLMRYYDVRMN 299

Query: 370 KYTFTFVLKACTGALDLKEGVQVHCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFD 549
           K T    L+A     DL++G+ +H  + ++G+  D+ + T L+ MY K GE++IA ++F 
Sbjct: 300 KVTAASGLQAAGYVGDLEKGIAIHEYVVQQGMIGDISVATSLMSMYSKCGELEIAEQLFI 359

Query: 550 EMPVLDVVAWNAMIS 594
            +   DVV+W+AMI+
Sbjct: 360 NIKDRDVVSWSAMIA 374



 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 3/169 (1%)
 Frame = +1

Query: 97  LRSCK---DLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSV 267
           L++C    DL   L+IH  +   G   D    T LV  Y   G+  SAR +F+      +
Sbjct: 107 LKACAGSMDLEEGLRIHGLISEMGFESDVYIGTALVEMYCKAGDLISARQVFDKMPEKDI 166

Query: 268 ISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCE 447
           ++WN M+    +     EAL L+  M    V++D  T   ++ A +   ++     +H  
Sbjct: 167 VTWNIMVSGLAQNGSPGEALRLFRDMHLSCVDIDHVTLYNLIPAVSKLENISVCRCLHGL 226

Query: 448 IARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           + R+G  S      GLIDMYCK  ++  A  +FDE+   D  +W  M++
Sbjct: 227 VFRKGFASG--FSNGLIDMYCKCADLYAAECIFDEVLCKDDSSWGTMMA 273



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 1/164 (0%)
 Frame = +1

Query: 106  CKDLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAE-NPSVISWNS 282
            C D +    ++  ++  G   +      L++ ++      +A+ +F       S +SWN 
Sbjct: 515  CSDSDRGSCVYGQIIKHGFDSECHVAHALIDMFTKCEALAAAKSLFEKCGFKKSTVSWNI 574

Query: 283  MIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRG 462
            M+  Y       EA+  + +M     + +  TF  +L A T    L+ G+ V   + R G
Sbjct: 575  MMNGYLLHGQAEEAIAAFRQMKIENFQPNIVTFVNILHATTQLAALRLGMAVQASLIRFG 634

Query: 463  LESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
              S   +G  L+DMY K G I+ +   F E+   D+V+WN M+S
Sbjct: 635  FCSHGPVGNSLVDMYAKCGMIESSERCFTEITNRDMVSWNTMLS 678



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 2/162 (1%)
 Frame = +1

Query: 115  LNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRA 294
            L L + + A L+  G          LV+ Y+  G  +S+   F    N  ++SWN+M+ A
Sbjct: 620  LRLGMAVQASLIRFGFCSHGPVGNSLVDMYAKCGMIESSERCFTEITNRDMVSWNTMLSA 679

Query: 295  YTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARR-GLES 471
            Y        A+ L+  M E  +++D  +F  VL AC  A  +KEG Q+  E+  R  +++
Sbjct: 680  YAVNGLASSAVSLFLFMQENELKLDAVSFLSVLSACRHAGLVKEGKQMFKEMEERYKIKA 739

Query: 472  DVFIGTGLIDMYCKLGEIDIAREVFDEMPV-LDVVAWNAMIS 594
            +V   + ++D+  K G  D A E+   M V   V  W A++S
Sbjct: 740  EVEHYSCMVDLLGKAGLFDEAVEIVRRMSVKASVGVWGALLS 781


>ref|XP_007139252.1| hypothetical protein PHAVU_008G013900g, partial [Phaseolus
           vulgaris] gi|561012385|gb|ESW11246.1| hypothetical
           protein PHAVU_008G013900g, partial [Phaseolus vulgaris]
          Length = 834

 Score =  183 bits (464), Expect = 4e-44
 Identities = 105/202 (51%), Positives = 130/202 (64%), Gaps = 4/202 (1%)
 Frame = +1

Query: 1   RPFNSLAMATAPEITNLFSSKATIRHDYYSRLLRSCKDLNLLLKIHAHLVVSG---LAQD 171
           R  +S A   +P  TN+   +    + YY  LLRSCK LN LL+IHA L+VS    LAQ 
Sbjct: 21  RHVHSDAFVISPTTTNI--QQYCNHNHYYLHLLRSCKHLNPLLQIHARLIVSEQCTLAQS 78

Query: 172 D-ITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRTNHNREALELYHRML 348
             I+IT                       NPS+I WNS+IRAY+R    +EA++LYHRML
Sbjct: 79  TPISIT-----------------------NPSLILWNSLIRAYSRLRLFQEAIKLYHRML 115

Query: 349 ERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLESDVFIGTGLIDMYCKLGEID 528
             G+E DKYTFTFVLKACTGAL  +EGV +H +I  R LE DVFIGTGL+DMYCK+G +D
Sbjct: 116 CVGLEPDKYTFTFVLKACTGALKFREGVAIHQDITSRELECDVFIGTGLVDMYCKMGHLD 175

Query: 529 IAREVFDEMPVLDVVAWNAMIS 594
            AR+VFD+MP+ DV +WN MIS
Sbjct: 176 SARKVFDKMPMKDVASWNTMIS 197



 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 42/162 (25%), Positives = 79/162 (48%)
 Frame = +1

Query: 109 KDLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMI 288
           +DL     +H + +  G+  D +  T +V+ Y+  G    A+ +F + +   +++W++ +
Sbjct: 289 RDLEKGRDVHHYALHEGIMSDIVVATPIVSMYAKCGELKKAKELFLSLKGRDLVAWSAFL 348

Query: 289 RAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLE 468
            A  +     EAL ++  M   G++ DK     ++ AC    +   G  VHC   +  + 
Sbjct: 349 SALVQAGFPGEALSIFQEMWHEGLKPDKTILKILVSACADISNAGLGKIVHCYTIKADMV 408

Query: 469 SDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           SD+ + T L+ MY +      A  +F+ M   DVVAWN +I+
Sbjct: 409 SDISVATTLVSMYTRCELFMYAMALFNRMQYKDVVAWNTLIN 450



 Score = 82.4 bits (202), Expect = 9e-14
 Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 4/171 (2%)
 Frame = +1

Query: 94  LLRSCKDLN---LLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPS 264
           L+ +C D++   L   +H + + + +  D    T LV+ Y+       A  +FN  +   
Sbjct: 382 LVSACADISNAGLGKIVHCYTIKADMVSDISVATTLVSMYTRCELFMYAMALFNRMQYKD 441

Query: 265 VISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHC 444
           V++WN++I  +T+    R A +++H +   G++ D  T   ++ AC+   DL  G   H 
Sbjct: 442 VVAWNTLINGFTKFGDPRLAFKMFHTLQLTGIQPDSGTMVSLVSACSLLDDLDLGSCFHG 501

Query: 445 EIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMP-VLDVVAWNAMIS 594
              + G E D+ +   LIDMY K G +  A  +F  +  V D V WN MI+
Sbjct: 502 NTIKSGFECDMHVRVALIDMYAKCGSLFSAENLFQLIKHVKDEVPWNVMIA 552



 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 1/162 (0%)
 Frame = +1

Query: 112 DLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAEN-PSVISWNSMI 288
           DL+L    H + + SG   D      L++ Y+  G+  SA  +F   ++    + WN MI
Sbjct: 492 DLDLGSCFHGNTIKSGFECDMHVRVALIDMYAKCGSLFSAENLFQLIKHVKDEVPWNVMI 551

Query: 289 RAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLE 468
             Y       EA+  +++M    V  +  TF  +L A T    ++E +  H  I R G  
Sbjct: 552 AGYLHNGGANEAISTFNQMKLESVRPNLVTFVIILPAVTYLSMVREAMAFHACIVRMGFI 611

Query: 469 SDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           S   +G  LIDMY K G++  + + F EM      +WNAM+S
Sbjct: 612 SSTLVGNSLIDMYAKCGQLSYSEKCFHEMENKGTNSWNAMLS 653



 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 51/205 (24%)
 Frame = +1

Query: 133 IHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRTNH 312
           IH  +    L  D    T LV+ Y   G+ DSAR +F+      V SWN+MI  Y+++++
Sbjct: 145 IHQDITSRELECDVFIGTGLVDMYCKMGHLDSARKVFDKMPMKDVASWNTMISGYSQSSN 204

Query: 313 NREALELYHRMLERGVEVD----------------------------------------- 369
             EA+E++ RM + GVE D                                         
Sbjct: 205 PCEAMEIFRRMQKEGVEPDSVNLARRIFDEMQVKDDVSWATMMAGYVHHGCFFEVLQLLD 264

Query: 370 ----------KYTFTFVLKACTGALDLKEGVQVHCEIARRGLESDVFIGTGLIDMYCKLG 519
                     K +    L A     DL++G  VH      G+ SD+ + T ++ MY K G
Sbjct: 265 KMKQQRIKMNKVSVVNSLLAAAEMRDLEKGRDVHHYALHEGIMSDIVVATPIVSMYAKCG 324

Query: 520 EIDIAREVFDEMPVLDVVAWNAMIS 594
           E+  A+E+F  +   D+VAW+A +S
Sbjct: 325 ELKKAKELFLSLKGRDLVAWSAFLS 349



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 2/157 (1%)
 Frame = +1

Query: 127  LKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRT 306
            +  HA +V  G     +    L++ Y+  G    +   F+  EN    SWN+M+  Y   
Sbjct: 599  MAFHACIVRMGFISSTLVGNSLIDMYAKCGQLSYSEKCFHEMENKGTNSWNAMLSGYAMH 658

Query: 307  NHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQV-HCEIARRGLESDVFI 483
                 AL L+  M E  V VD  ++  VL AC  A  + EG  + H    +  L+ ++  
Sbjct: 659  GQGELALALFSLMQENHVHVDSLSYISVLSACRHAGLIPEGKNIFHAMTEKHNLQPNMEH 718

Query: 484  GTGLIDMYCKLGEIDIAREVFDEMPV-LDVVAWNAMI 591
               ++D+  + G  D    + D MP   D   W A++
Sbjct: 719  YACMVDLLGRAGLFDEVLSLIDRMPTEPDAQVWGALL 755


>ref|XP_002881665.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297327504|gb|EFH57924.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 836

 Score =  179 bits (454), Expect = 5e-43
 Identities = 86/169 (50%), Positives = 120/169 (71%), Gaps = 1/169 (0%)
 Frame = +1

Query: 91  RLLRSCKDLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVI 270
           R+LR CK+  LLL+IH  L+V+GL   +     L+N+YS F   D +R I ++   P V+
Sbjct: 10  RMLRECKNFRLLLQIHGSLIVAGLKPHN----QLINAYSLFQRPDLSRKIVDSVPYPGVV 65

Query: 271 SWNSMIRAYTRTNHNREALELYHRMLE-RGVEVDKYTFTFVLKACTGALDLKEGVQVHCE 447
            WNSMIR YTR   ++EALE++  M E +G++ DKYTFTF LKAC G++D +EG+++H  
Sbjct: 66  LWNSMIRGYTRAGLHKEALEVFGYMSEAKGIDPDKYTFTFALKACAGSMDFEEGLRIHDL 125

Query: 448 IARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           IA  G ESDV+IGT L++MYCK G++  AR+VFD+MPV D+V WN M+S
Sbjct: 126 IAEMGFESDVYIGTALVEMYCKAGDLVSARQVFDKMPVKDIVTWNTMVS 174



 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 46/154 (29%), Positives = 80/154 (51%)
 Frame = +1

Query: 127 LKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRT 306
           + IH + V  G+  D    T L+N YS  G  + A  +F   ++  V+SW++MI ++ + 
Sbjct: 320 IAIHEYTVQQGMMSDISVATSLINMYSKCGELELAEQLFIKIKDRDVVSWSAMIASFEQA 379

Query: 307 NHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLESDVFIG 486
             + EAL L+  M+    + +  T T VL+ C G    + G  +HC   +  +ES++   
Sbjct: 380 GQHDEALSLFRDMMRTHFKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADVESELETA 439

Query: 487 TGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAM 588
           T +I MY K G      + F+ +P+ D +A+NA+
Sbjct: 440 TAVISMYAKCGLFSPTLKAFERLPIKDAIAFNAL 473



 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 41/135 (30%), Positives = 74/135 (54%)
 Frame = +1

Query: 190 LVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRTNHNREALELYHRMLERGVEVD 369
           L++ Y    +  +A  +F    +    SW +M+ AY       E LEL+  M    V ++
Sbjct: 240 LIDMYCKCADLYAAECVFEEVFSKDESSWGTMMAAYAHNGSFEEVLELFDVMRNYDVRMN 299

Query: 370 KYTFTFVLKACTGALDLKEGVQVHCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFD 549
           K      L+A     +L++G+ +H    ++G+ SD+ + T LI+MY K GE+++A ++F 
Sbjct: 300 KVAAASALQAAAYVGNLEKGIAIHEYTVQQGMMSDISVATSLINMYSKCGELELAEQLFI 359

Query: 550 EMPVLDVVAWNAMIS 594
           ++   DVV+W+AMI+
Sbjct: 360 KIKDRDVVSWSAMIA 374



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 5/193 (2%)
 Frame = +1

Query: 31  APEITNLFSSKATIRHDYYSRL--LRSCK---DLNLLLKIHAHLVVSGLAQDDITITHLV 195
           A E+    S    I  D Y+    L++C    D    L+IH  +   G   D    T LV
Sbjct: 83  ALEVFGYMSEAKGIDPDKYTFTFALKACAGSMDFEEGLRIHDLIAEMGFESDVYIGTALV 142

Query: 196 NSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKY 375
             Y   G+  SAR +F+      +++WN+M+    +   + EAL L+  M    V++D  
Sbjct: 143 EMYCKAGDLVSARQVFDKMPVKDIVTWNTMVSGLAQNGCSSEALRLFRDMHSSFVDIDHV 202

Query: 376 TFTFVLKACTGALDLKEGVQVHCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEM 555
           +   ++ A +          +H  + ++G  S     +GLIDMYCK  ++  A  VF+E+
Sbjct: 203 SLYNLIPAVSKLEKNDVCRCLHGLVIKKGFTS--AFSSGLIDMYCKCADLYAAECVFEEV 260

Query: 556 PVLDVVAWNAMIS 594
              D  +W  M++
Sbjct: 261 FSKDESSWGTMMA 273



 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
 Frame = +1

Query: 106  CKDLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAE-NPSVISWNS 282
            C D      ++  ++  G   +      L++ ++      +A+ +F+      S +SWN 
Sbjct: 515  CSDYARGSCVYGQIIKHGFDSECHVAHALIDMFTKCDALAAAKSLFDKCGFEKSTVSWNI 574

Query: 283  MIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRG 462
            M+  Y       EA+  + +M     + +  TF  +++A      L  G+ VH  + + G
Sbjct: 575  MMNGYLLHGQAEEAIATFRQMKVEKFQPNAVTFVNIVRAAAELAALSLGMSVHSSLIQFG 634

Query: 463  LESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
              S   +G  L+DMY K G I+ +++ F E+   ++V+WN M+S
Sbjct: 635  FCSHTPVGNSLVDMYAKCGMIESSKKCFIEIRNKNMVSWNTMLS 678



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 38/155 (24%), Positives = 72/155 (46%), Gaps = 1/155 (0%)
 Frame = +1

Query: 133 IHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRTNH 312
           IH + + + +  +  T T +++ Y+  G        F        I++N++ + YT+   
Sbjct: 423 IHCYAIKADVESELETATAVISMYAKCGLFSPTLKAFERLPIKDAIAFNALAQGYTQIGD 482

Query: 313 NREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLESDVFIGTG 492
             +A ++Y  M   GV  D  T   +L+ C    D   G  V+ +I + G +S+  +   
Sbjct: 483 ASKAFDVYKNMKLHGVCPDSGTMVGMLQTCALCSDYARGSCVYGQIIKHGFDSECHVAHA 542

Query: 493 LIDMYCKLGEIDIAREVFDEMPV-LDVVAWNAMIS 594
           LIDM+ K   +  A+ +FD+       V+WN M++
Sbjct: 543 LIDMFTKCDALAAAKSLFDKCGFEKSTVSWNIMMN 577



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 2/162 (1%)
 Frame = +1

Query: 115  LNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRA 294
            L+L + +H+ L+  G          LV+ Y+  G  +S++  F    N +++SWN+M+ A
Sbjct: 620  LSLGMSVHSSLIQFGFCSHTPVGNSLVDMYAKCGMIESSKKCFIEIRNKNMVSWNTMLSA 679

Query: 295  YTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEI-ARRGLES 471
            Y        A+ L+  M E  ++ D  +F  VL AC  A   +EG ++  E+  R  +E+
Sbjct: 680  YAAHGLANCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLAEEGKRIFKEMEERHKIEA 739

Query: 472  DVFIGTGLIDMYCKLGEIDIAREVFDEMPV-LDVVAWNAMIS 594
             V     ++D+  K G  D A E+   M V   V  W A+++
Sbjct: 740  KVEHYACMVDLLGKSGLFDEAVEMVRRMRVKASVGVWGALLN 781


>ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Glycine max]
          Length = 887

 Score =  179 bits (453), Expect = 7e-43
 Identities = 96/184 (52%), Positives = 115/184 (62%)
 Frame = +1

Query: 43  TNLFSSKATIRHDYYSRLLRSCKDLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNS 222
           TN         H YY  LLRSCK LN LL+IHA L+V                       
Sbjct: 41  TNTIPHHCNHNHHYYLHLLRSCKYLNPLLQIHARLIVQ---------------------- 78

Query: 223 DSARLIFNNAENPSVISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKAC 402
               L  N+  NPS+I WNS+IRAY+R +  +EA++ Y  M   G+E DKYTFTFVLKAC
Sbjct: 79  -QCTLAPNSITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKAC 137

Query: 403 TGALDLKEGVQVHCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWN 582
           TGALD  EGV +H +IA R LE DVFIGTGL+DMYCK+G +D AR+VFD+MP  DV +WN
Sbjct: 138 TGALDFHEGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWN 197

Query: 583 AMIS 594
           AMIS
Sbjct: 198 AMIS 201



 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 54/173 (31%), Positives = 90/173 (52%), Gaps = 4/173 (2%)
 Frame = +1

Query: 88  SRLLRSCKDLN---LLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAEN 258
           S L+ +C +++   L   +H +++ + +  D    T LV+ Y+   +   A  +FN    
Sbjct: 433 SSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHY 492

Query: 259 PSVISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQV 438
             V++WN++I  +T+    R ALE++ R+   GV+ D  T   +L AC    DL  G+  
Sbjct: 493 KDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICF 552

Query: 439 HCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFD-EMPVLDVVAWNAMIS 594
           H  I + G+ES++ +   LIDMY K G +  A  +F     V D V+WN MI+
Sbjct: 553 HGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIA 605



 Score = 89.4 bits (220), Expect = 7e-16
 Identities = 54/174 (31%), Positives = 93/174 (53%), Gaps = 4/174 (2%)
 Frame = +1

Query: 85  YSRLLRSCK---DLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAE 255
           ++ +L++C    D +  + IH  +    L  D    T LV+ Y   G+ D+AR +F+   
Sbjct: 130 FTFVLKACTGALDFHEGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMP 189

Query: 256 NPSVISWNSMIRAYTRTNHNREALELYHRM-LERGVEVDKYTFTFVLKACTGALDLKEGV 432
              V SWN+MI   +++++  EALE++ RM +E GVE D  +   +  A +   D+    
Sbjct: 190 GKDVASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCK 249

Query: 433 QVHCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
            +H  + RR +     +   LIDMY K GE+ +A ++FD+M V D ++W  M++
Sbjct: 250 SIHGYVVRRCVFG--VVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMA 301



 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 42/162 (25%), Positives = 81/162 (50%)
 Frame = +1

Query: 109 KDLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMI 288
           +DL    ++H + +  G+  D +  T +V+ Y+  G    A+  F + E   ++ W++ +
Sbjct: 342 RDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFL 401

Query: 289 RAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLE 468
            A  +  +  EAL ++  M   G++ DK   + ++ AC      + G  +HC + +  + 
Sbjct: 402 SALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMG 461

Query: 469 SDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           SD+ + T L+ MY +      A  +F+ M   DVVAWN +I+
Sbjct: 462 SDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLIN 503



 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 4/171 (2%)
 Frame = +1

Query: 94   LLRSCK---DLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFN-NAENP 261
            LL +C    DL L +  H +++ +G+  +      L++ Y+  G+  +A  +F+ N    
Sbjct: 536  LLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVK 595

Query: 262  SVISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVH 441
              +SWN MI  Y       EA+  +++M    V  +  TF  +L A +    L+E +  H
Sbjct: 596  DEVSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREAMAFH 655

Query: 442  CEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
              I R G  S   IG  LIDMY K G++  + + F EM     ++WNAM+S
Sbjct: 656  ACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGTISWNAMLS 706



 Score = 75.9 bits (185), Expect = 8e-12
 Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 3/165 (1%)
 Frame = +1

Query: 109 KDLNLLLKIHAHLV---VSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWN 279
           +D++    IH ++V   V G+  +      L++ YS  G    A  IF+       ISW 
Sbjct: 243 EDVDSCKSIHGYVVRRCVFGVVSNS-----LIDMYSKCGEVKLAHQIFDQMWVKDDISWA 297

Query: 280 SMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARR 459
           +M+  Y       E L+L   M  + ++++K +    + A T   DL++G +VH    + 
Sbjct: 298 TMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQL 357

Query: 460 GLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           G+ SD+ + T ++ MY K GE+  A+E F  +   D+V W+A +S
Sbjct: 358 GMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLS 402



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 2/157 (1%)
 Frame = +1

Query: 127  LKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRT 306
            +  HA ++  G     +    L++ Y+  G    +   F+  EN   ISWN+M+  Y   
Sbjct: 652  MAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGTISWNAMLSGYAMH 711

Query: 307  NHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIA-RRGLESDVFI 483
                 AL L+  M E  V VD  ++  VL AC  A  ++EG  +   +  +  LE  +  
Sbjct: 712  GQGEVALALFSLMQETHVPVDSVSYISVLSACRHAGLIQEGRNIFQSMTEKHNLEPSMEH 771

Query: 484  GTGLIDMYCKLGEIDIAREVFDEMPV-LDVVAWNAMI 591
               ++D+    G  D    + D+MP   D   W A++
Sbjct: 772  YACMVDLLGCAGLFDEVLCLIDKMPTEPDAQVWGALL 808


>ref|XP_006848056.1| hypothetical protein AMTR_s00029p00196710 [Amborella trichopoda]
           gi|548851361|gb|ERN09637.1| hypothetical protein
           AMTR_s00029p00196710 [Amborella trichopoda]
          Length = 1462

 Score =  176 bits (447), Expect = 3e-42
 Identities = 90/171 (52%), Positives = 116/171 (67%)
 Frame = +1

Query: 82  YYSRLLRSCKDLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENP 261
           YY+ LL SCK+L+ L +IH  L+  GL  D      L+N YS +  S   RLIF+ ++ P
Sbjct: 52  YYTNLLSSCKNLSSLKQIHGRLIALGLESDHSLEAKLLNLYSVYHGSVGGRLIFDFSKTP 111

Query: 262 SVISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVH 441
           +VI WNSMI+ Y ++N  REAL LY  ML++ +E D YTF FVLKACTG+L L+ G  +H
Sbjct: 112 TVILWNSMIKVYNKSNLYREALVLYTDMLKQAIEPDNYTFPFVLKACTGSLCLEMGFSLH 171

Query: 442 CEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
            E+ +RG   D +I TGLIDMYCK G  + AREVF++M   DVVAWNAMIS
Sbjct: 172 GEVVKRGFGLDGYICTGLIDMYCKFGYTEFAREVFNKMSERDVVAWNAMIS 222



 Score =  101 bits (251), Expect = 2e-19
 Identities = 56/164 (34%), Positives = 87/164 (53%), Gaps = 2/164 (1%)
 Frame = +1

Query: 109 KDLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMI 288
           +D+    +IH +L+  G + D    T L+  Y+  GN + A+ +FN  EN  +++W++MI
Sbjct: 362 RDIEKGKEIHDYLIQRGTSLDIEVSTTLITMYAKCGNLNLAKELFNGIENGDLVAWSAMI 421

Query: 289 RAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIAR--RG 462
            A     H  EAL+ +  M    ++ ++ T   VL +C     LK G  +H  + +   G
Sbjct: 422 SALAHGEHPNEALQFFREMQNVNLKPNRVTIVSVLPSCAEISALKLGKSIHGYVMKVDMG 481

Query: 463 LESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           +  DV IGT L+ MY K G    A+  F EMP  DVV WNAM++
Sbjct: 482 MGLDVSIGTALVAMYVKCGCFSHAKLWFHEMPCKDVVTWNAMVN 525



 Score = 92.8 bits (229), Expect = 6e-17
 Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 5/183 (2%)
 Frame = +1

Query: 61  KATIRHDYYSR--LLRSCKD---LNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSD 225
           K  I  D Y+   +L++C     L +   +H  +V  G   D    T L++ Y  FG ++
Sbjct: 141 KQAIEPDNYTFPFVLKACTGSLCLEMGFSLHGEVVKRGFGLDGYICTGLIDMYCKFGYTE 200

Query: 226 SARLIFNNAENPSVISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACT 405
            AR +FN      V++WN+MI  Y++    +EAL+++  M   G+E +  +   +  +  
Sbjct: 201 FAREVFNKMSERDVVAWNAMISGYSQVGDPKEALKVFREMQMVGIEANSVSLLNLFPSVC 260

Query: 406 GALDLKEGVQVHCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNA 585
               L     +HC   +R  E  VF   GLID+Y K G ++ +R +FD +   D V+W +
Sbjct: 261 WLSSLVLCKCLHCFAIKREFELSVF--NGLIDLYAKCGNVEASRRIFDRLLKRDDVSWGS 318

Query: 586 MIS 594
           +IS
Sbjct: 319 LIS 321



 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 45/135 (33%), Positives = 82/135 (60%)
 Frame = +1

Query: 190 LVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRTNHNREALELYHRMLERGVEVD 369
           L++ Y+  GN +++R IF+       +SW S+I AY++  ++ EALE++  +    V ++
Sbjct: 288 LIDLYAKCGNVEASRRIFDRLLKRDDVSWGSLISAYSQNGYSVEALEIFGVLKRDKVRLN 347

Query: 370 KYTFTFVLKACTGALDLKEGVQVHCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFD 549
           +      L A T   D+++G ++H  + +RG   D+ + T LI MY K G +++A+E+F+
Sbjct: 348 QVQIVGALLAATDLRDIEKGKEIHDYLIQRGTSLDIEVSTTLITMYAKCGNLNLAKELFN 407

Query: 550 EMPVLDVVAWNAMIS 594
            +   D+VAW+AMIS
Sbjct: 408 GIENGDLVAWSAMIS 422



 Score = 85.9 bits (211), Expect = 8e-15
 Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 5/172 (2%)
 Frame = +1

Query: 94  LLRSCKDLNLLL---KIHAHL--VVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAEN 258
           +L SC +++ L     IH ++  V  G+  D    T LV  Y   G    A+L F+    
Sbjct: 455 VLPSCAEISALKLGKSIHGYVMKVDMGMGLDVSIGTALVAMYVKCGCFSHAKLWFHEMPC 514

Query: 259 PSVISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQV 438
             V++WN+M+  Y +  H  +A+E +  M   G+++D  T   +L +C     +  G  +
Sbjct: 515 KDVVTWNAMVNGYAQMGHAHKAMETFRHMQSVGLKLDSSTLVGLLPSCALLKAINNGNCI 574

Query: 439 HCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           H    + G ESD+ +    IDMY K G I  A ++F+   V D ++WN MI+
Sbjct: 575 HGHAIKLGFESDLHVMNATIDMYAKCGCIGHAEKLFETEFVKDEISWNTMIA 626


>ref|NP_181492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75099847|sp|O80647.1|PP195_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g39620 gi|3355489|gb|AAC27851.1| hypothetical protein
           [Arabidopsis thaliana] gi|330254604|gb|AEC09698.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 836

 Score =  174 bits (440), Expect = 2e-41
 Identities = 84/168 (50%), Positives = 118/168 (70%), Gaps = 1/168 (0%)
 Frame = +1

Query: 94  LLRSCKDLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVIS 273
           +LR CK+   LL++H  L+VSGL   +     L+N+YS F   D +R+IF++  +P V+ 
Sbjct: 11  MLRECKNFRCLLQVHGSLIVSGLKPHN----QLINAYSLFQRQDLSRVIFDSVRDPGVVL 66

Query: 274 WNSMIRAYTRTNHNREALELYHRMLE-RGVEVDKYTFTFVLKACTGALDLKEGVQVHCEI 450
           WNSMIR YTR   +REAL  +  M E +G++ DKY+FTF LKAC G++D K+G+++H  I
Sbjct: 67  WNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLI 126

Query: 451 ARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           A  GLESDV+IGT L++MYCK  ++  AR+VFD+M V DVV WN M+S
Sbjct: 127 AEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVS 174



 Score =  101 bits (251), Expect = 2e-19
 Identities = 52/159 (32%), Positives = 85/159 (53%)
 Frame = +1

Query: 112 DLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIR 291
           DL   + IH + V  GL  D    T L++ YS  G  + A  +F N E+  V+SW++MI 
Sbjct: 315 DLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIA 374

Query: 292 AYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLES 471
           +Y +   + EA+ L+  M+   ++ +  T T VL+ C G    + G  +HC   +  +ES
Sbjct: 375 SYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIES 434

Query: 472 DVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAM 588
           ++   T +I MY K G    A + F+ +P+ D VA+NA+
Sbjct: 435 ELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNAL 473



 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 43/135 (31%), Positives = 70/135 (51%)
 Frame = +1

Query: 190 LVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRTNHNREALELYHRMLERGVEVD 369
           L++ Y +  +  +A  +F         SW +M+ AY       E LEL+  M    V ++
Sbjct: 240 LIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMN 299

Query: 370 KYTFTFVLKACTGALDLKEGVQVHCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFD 549
           K      L+A     DL +G+ +H    ++GL  DV + T L+ MY K GE++IA ++F 
Sbjct: 300 KVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFI 359

Query: 550 EMPVLDVVAWNAMIS 594
            +   DVV+W+AMI+
Sbjct: 360 NIEDRDVVSWSAMIA 374



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 1/164 (0%)
 Frame = +1

Query: 106  CKDLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAE-NPSVISWNS 282
            C D      ++  ++  G   +      L+N ++      +A ++F+      S +SWN 
Sbjct: 515  CSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNI 574

Query: 283  MIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRG 462
            M+  Y       EA+  + +M     + +  TF  +++A      L+ G+ VH  + + G
Sbjct: 575  MMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCG 634

Query: 463  LESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
              S   +G  L+DMY K G I+ + + F E+    +V+WN M+S
Sbjct: 635  FCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLS 678



 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 4/170 (2%)
 Frame = +1

Query: 97  LRSCK---DLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSV 267
           L++C    D    L+IH  +   GL  D    T LV  Y    +  SAR +F+      V
Sbjct: 107 LKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDV 166

Query: 268 ISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCE 447
           ++WN+M+    +   +  AL L+H M    V++D  +   ++ A +          +H  
Sbjct: 167 VTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGL 226

Query: 448 IARRGLESDVF-IGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           + ++G    +F   +GLIDMYC   ++  A  VF+E+   D  +W  M++
Sbjct: 227 VIKKGF---IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMA 273



 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 46/175 (26%), Positives = 84/175 (48%), Gaps = 5/175 (2%)
 Frame = +1

Query: 85   YSRLLRSCKDLNLL---LKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAE 255
            +  ++R+  +L+ L   + +H+ L+  G          LV+ Y+  G  +S+   F    
Sbjct: 607  FVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEIS 666

Query: 256  NPSVISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQ 435
            N  ++SWN+M+ AY        A+ L+  M E  ++ D  +F  VL AC  A  ++EG +
Sbjct: 667  NKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKR 726

Query: 436  VHCEIA-RRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPV-LDVVAWNAMIS 594
            +  E+  R  +E++V     ++D+  K G    A E+   M V   V  W A+++
Sbjct: 727  IFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLN 781


>ref|XP_004492098.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Cicer arietinum]
          Length = 858

 Score =  166 bits (419), Expect = 6e-39
 Identities = 86/173 (49%), Positives = 110/173 (63%)
 Frame = +1

Query: 76  HDYYSRLLRSCKDLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAE 255
           H++Y +L+RSCK  N LL+IHAH +V+                                 
Sbjct: 34  HNHYLQLIRSCKHFNPLLQIHAHFLVT--------------------------------- 60

Query: 256 NPSVISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQ 435
           NPS+I WNS+IRAY+R     +A+ LYH ML+ G+E DKYTFTFVLKACT ALD  EGV 
Sbjct: 61  NPSLILWNSLIRAYSRFLKFHKAINLYHTMLQIGLEPDKYTFTFVLKACTCALDFHEGVS 120

Query: 436 VHCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           V+ +I  +GLE DVFIGT L++M+CK+G +D AR+VFD+MP  DV  WNAMIS
Sbjct: 121 VYKDIVLKGLECDVFIGTSLVNMFCKMGHLDSARKVFDKMPKKDVTTWNAMIS 173



 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 55/173 (31%), Positives = 93/173 (53%), Gaps = 3/173 (1%)
 Frame = +1

Query: 85  YSRLLRSCK---DLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAE 255
           ++ +L++C    D +  + ++  +V+ GL  D    T LVN +   G+ DSAR +F+   
Sbjct: 102 FTFVLKACTCALDFHEGVSVYKDIVLKGLECDVFIGTSLVNMFCKMGHLDSARKVFDKMP 161

Query: 256 NPSVISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQ 435
              V +WN+MI   +++ +  E +E++ RM   GVEVD  +   +  A +   D      
Sbjct: 162 KKDVTTWNAMISGLSQSLNPCEGMEMFWRMQVEGVEVDTVSILNLAPAVSRLEDFGCCKS 221

Query: 436 VHCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           +H  + RRG+     +   LIDMY K GE+ +AR +FD M V+D V+W  M++
Sbjct: 222 IHGYVVRRGICG--VVSNSLIDMYSKCGEVYLARRIFDRMRVMDDVSWATMMA 272



 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 4/171 (2%)
 Frame = +1

Query: 94  LLRSCKDL-NLLL--KIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPS 264
           L+ +C ++ NL L   +H++ + + +  D   +T LV+ Y  F     A  +FN      
Sbjct: 406 LVSACSEISNLRLGKTLHSYAITADMVSDIFAVTTLVSMYMKFELFIYAMTLFNGMHYKD 465

Query: 265 VISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHC 444
           V+ WN++I  +T+      A E++ R+   G++ D  T   ++ AC+   DL  G   H 
Sbjct: 466 VVVWNTLINGFTKYGDPHVAFEMFRRLQLSGIQPDSGTMVGLVSACSILDDLDLGTCFHG 525

Query: 445 EIARRGLESDVFIGTGLIDMYCKLGEI-DIAREVFDEMPVLDVVAWNAMIS 594
            I + G ES++ I   L+DMY K G +  + +  F    + D V+WN MI+
Sbjct: 526 NIEKCGFESNIHIKIALMDMYAKCGSLCSVEKFFFLTKHLKDEVSWNVMIA 576



 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 47/162 (29%), Positives = 83/162 (51%)
 Frame = +1

Query: 109 KDLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMI 288
           +D      IH ++V  G+    +    L++ YS  G    AR IF+       +SW +M+
Sbjct: 214 EDFGCCKSIHGYVVRRGIC--GVVSNSLIDMYSKCGEVYLARRIFDRMRVMDDVSWATMM 271

Query: 289 RAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLE 468
             Y +     E L+L  +M ++ V+++K      L A +   DL++G ++H    + G+ 
Sbjct: 272 AGYVQHGCYFEVLQLLDKMKQKNVKMNKVAIVNALLAASEMRDLEKGKEIHDCALQLGIM 331

Query: 469 SDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           SD+ + T ++ MY K GE+  A+E+F  +   D VAW+A +S
Sbjct: 332 SDIVVATPVVSMYAKCGELKKAKELFLSLEGRDSVAWSAFLS 373



 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 45/162 (27%), Positives = 80/162 (49%)
 Frame = +1

Query: 109 KDLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMI 288
           +DL    +IH   +  G+  D +  T +V+ Y+  G    A+ +F + E    ++W++ +
Sbjct: 313 RDLEKGKEIHDCALQLGIMSDIVVATPVVSMYAKCGELKKAKELFLSLEGRDSVAWSAFL 372

Query: 289 RAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLE 468
            A  +  + REAL ++  M   G++  K   T ++ AC+   +L+ G  +H       + 
Sbjct: 373 SALVQAGYPREALSIFPEMHHEGLKPGKAIVTILVSACSEISNLRLGKTLHSYAITADMV 432

Query: 469 SDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           SD+F  T L+ MY K      A  +F+ M   DVV WN +I+
Sbjct: 433 SDIFAVTTLVSMYMKFELFIYAMTLFNGMHYKDVVVWNTLIN 474



 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 51/162 (31%), Positives = 74/162 (45%), Gaps = 1/162 (0%)
 Frame = +1

Query: 112  DLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSA-RLIFNNAENPSVISWNSMI 288
            DL+L    H ++   G   +      L++ Y+  G+  S  +  F        +SWN MI
Sbjct: 516  DLDLGTCFHGNIEKCGFESNIHIKIALMDMYAKCGSLCSVEKFFFLTKHLKDEVSWNVMI 575

Query: 289  RAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLE 468
              Y       EA+  + RM    V  +  TF  VL A +    L+E +  H  I R G  
Sbjct: 576  AGYLHNGCANEAISTFRRMKLENVRPNLVTFVTVLPAVSYLTVLREAMAFHACIVRTGFL 635

Query: 469  SDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
            S   IG  LIDMY K G++  + + F EM   D ++WNAM+S
Sbjct: 636  SSTLIGNSLIDMYAKCGQLSYSEKCFHEMENKDSISWNAMLS 677



 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 2/157 (1%)
 Frame = +1

Query: 127  LKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRT 306
            +  HA +V +G     +    L++ Y+  G    +   F+  EN   ISWN+M+  Y   
Sbjct: 623  MAFHACIVRTGFLSSTLIGNSLIDMYAKCGQLSYSEKCFHEMENKDSISWNAMLSGYAMH 682

Query: 307  NHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIA-RRGLESDVFI 483
                 A+ L+  M +  V VD  ++  VL AC  A  ++EG  V   ++ +  +E ++  
Sbjct: 683  GQGELAITLFSHMQQTNVHVDSISYISVLSACRHAGLIQEGRNVFASMSEKHHVEPNMEH 742

Query: 484  GTGLIDMYCKLGEIDIAREVFDEMPV-LDVVAWNAMI 591
               ++D+  + G  D    +  +MP   D   W A++
Sbjct: 743  YACMVDLLGRAGLFDEVLSLIKKMPTEPDAQVWGALL 779


>ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355488067|gb|AES69270.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 944

 Score =  151 bits (381), Expect = 2e-34
 Identities = 79/183 (43%), Positives = 111/183 (60%)
 Frame = +1

Query: 46  NLFSSKATIRHDYYSRLLRSCKDLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSD 225
           ++F  +    +++Y +L+ SCK +N LL+IH H                           
Sbjct: 23  HIFPIQQQNNNNHYLKLINSCKYINPLLQIHTH--------------------------- 55

Query: 226 SARLIFNNAENPSVISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACT 405
                F   +NPS+I +NS I+AY++ +H  +A+ LYH +L+ G++ DK+TF FVLKACT
Sbjct: 56  -----FLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACT 110

Query: 406 GALDLKEGVQVHCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNA 585
            ALD  EGV ++ +I   GLE DV+IGT LIDM+CK+G +D AR VFD+MPV D V WNA
Sbjct: 111 SALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNA 170

Query: 586 MIS 594
           MIS
Sbjct: 171 MIS 173



 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 44/162 (27%), Positives = 83/162 (51%)
 Frame = +1

Query: 109 KDLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMI 288
           +DL    +I+ + +  GL  D +  T +V  Y+  G    AR +F + E   +++W++ +
Sbjct: 313 RDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFL 372

Query: 289 RAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLE 468
            A   T + RE L ++  M   G++ DK   + ++  CT   ++  G  +HC   +  +E
Sbjct: 373 SALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADME 432

Query: 469 SDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           SD+ + T L+ MY +      A  +F+ M + D+V WN +I+
Sbjct: 433 SDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLIN 474



 Score = 85.9 bits (211), Expect = 8e-15
 Identities = 53/173 (30%), Positives = 91/173 (52%), Gaps = 3/173 (1%)
 Frame = +1

Query: 85  YSRLLRSCK---DLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAE 255
           ++ +L++C    D +  + I+  +V +GL  D    T L++ +   G  D+AR +F+   
Sbjct: 102 FNFVLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMP 161

Query: 256 NPSVISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQ 435
               + WN+MI   +++ +  EALE++ RM   G EVDK +   +  A +   D+     
Sbjct: 162 VKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKS 221

Query: 436 VHCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           +H  + RR +     +   LIDMYCK G++  A+ VFD M V D V+W  M++
Sbjct: 222 IHGYVVRRSICG--VVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMA 272



 Score = 85.9 bits (211), Expect = 8e-15
 Identities = 52/162 (32%), Positives = 79/162 (48%), Gaps = 1/162 (0%)
 Frame = +1

Query: 112  DLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAEN-PSVISWNSMI 288
            DL+L   +H  +  SG   D      L++ Y+  G+  S   +F   ++    +SWN MI
Sbjct: 516  DLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMI 575

Query: 289  RAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLE 468
              Y    ++ EA+  + RM    V  +  TF  +L A +    L+E +  H  I R G  
Sbjct: 576  AGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMGFL 635

Query: 469  SDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
            S   IG  LIDMY K G++  + + F EM   D ++WNAM+S
Sbjct: 636  SCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLS 677



 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 1/155 (0%)
 Frame = +1

Query: 133 IHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRTNH 312
           +H + + + +  D   +T LV+ Y  F     A  +FN  +   ++ WN++I  +T+   
Sbjct: 422 MHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGD 481

Query: 313 NREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLESDVFIGTG 492
              ALE+++R+   G+  D  T   +  AC    DL  G  +H  I + G ESD+ +   
Sbjct: 482 PHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVA 541

Query: 493 LIDMYCKLGEI-DIAREVFDEMPVLDVVAWNAMIS 594
           L+DMY K G +  + R       V D V+WN MI+
Sbjct: 542 LMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIA 576



 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 45/161 (27%), Positives = 81/161 (50%)
 Frame = +1

Query: 112 DLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIR 291
           D+     IH ++V   +    +    L++ Y   G+  SA+ +F+       +SW +M+ 
Sbjct: 215 DVGCCKSIHGYVVRRSIC--GVVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMA 272

Query: 292 AYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLES 471
            Y +     E L+L H+M    V+++K      L       DL++G +++    + GL S
Sbjct: 273 GYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMS 332

Query: 472 DVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           D+ + T ++ MY K GE+  ARE+F  +   D+VAW+A +S
Sbjct: 333 DIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLS 373


>gb|EMT01370.1| hypothetical protein F775_14713 [Aegilops tauschii]
          Length = 637

 Score =  144 bits (363), Expect = 2e-32
 Identities = 77/200 (38%), Positives = 113/200 (56%), Gaps = 3/200 (1%)
 Frame = +1

Query: 4   PFNSLAMATAPEITNLFSSKATIRHDYYSRLLRSCKDLNLLL---KIHAHLVVSGLAQDD 174
           P  ++A++  P  TN   + +   +  Y+ +L+SC     L    K+H  L+VSGL  D 
Sbjct: 38  PTTAIALSPPPPSTNSHLASSPHSYHRYASILQSCVAAGSLRAGRKLHGRLLVSGLGPDT 97

Query: 175 ITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRTNHNREALELYHRMLER 354
           +  T LV+ Y++ G+   AR +F+     +V  WN +IRAY R      A++LY  M E 
Sbjct: 98  VLSTKLVDLYAACGHVGQARRLFDGMPKRNVFLWNVLIRAYAREGPREAAVQLYRGMAEH 157

Query: 355 GVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLESDVFIGTGLIDMYCKLGEIDIA 534
           GVE D +T+  VLKAC   LDL+ G +VH  ++      DVF+  G++DMY K G +D A
Sbjct: 158 GVEPDNFTYPLVLKACAALLDLETGREVHEHVSGTRWGQDVFVCAGVVDMYAKCGCVDDA 217

Query: 535 REVFDEMPVLDVVAWNAMIS 594
           R VFD + V D V WN+MI+
Sbjct: 218 RAVFDGIAVRDAVVWNSMIA 237



 Score = 90.1 bits (222), Expect = 4e-16
 Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 3/172 (1%)
 Frame = +1

Query: 85  YSRLLRSCK---DLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAE 255
           Y  +L++C    DL    ++H H+  +   QD      +V+ Y+  G  D AR +F+   
Sbjct: 166 YPLVLKACAALLDLETGREVHEHVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIA 225

Query: 256 NPSVISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQ 435
               + WNSMI AY +     EAL L   M   GV     T    + A   A  L  G +
Sbjct: 226 VRDAVVWNSMIAAYGQNGRPMEALSLCRDMASNGVGPTIATLVSTISAAADAAALPRGRE 285

Query: 436 VHCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMI 591
           +H    RRG      + T L+DMY K G + +AR +F+++   ++V+WNAMI
Sbjct: 286 LHGFGWRRGFGGQDKLKTSLVDMYAKSGWLHVARVLFEQLMKRELVSWNAMI 337


>ref|XP_006418855.1| hypothetical protein EUTSA_v10002433mg [Eutrema salsugineum]
           gi|557096783|gb|ESQ37291.1| hypothetical protein
           EUTSA_v10002433mg [Eutrema salsugineum]
          Length = 659

 Score =  144 bits (362), Expect = 2e-32
 Identities = 73/190 (38%), Positives = 111/190 (58%), Gaps = 8/190 (4%)
 Frame = +1

Query: 49  LFSSKATIRHDYYSRLLRSC---KDLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGN 219
           + S +++     Y  L+R C     L+  L++H H++ +G  QD    T L+  YS  G+
Sbjct: 69  VLSQESSPSQQTYELLIRCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGS 128

Query: 220 SDSARLIFNNAENPSVISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKA 399
            D AR +F+     ++  WN++ RA T   H  E L LY +M   GVE D++T+T+VLKA
Sbjct: 129 VDHARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKA 188

Query: 400 CTGALD-----LKEGVQVHCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVL 564
           C  + +     L +G ++H  + RRG  S V+I T L+DMY + G +D A  VFDEMPV 
Sbjct: 189 CVASPECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLLDMYARFGCVDYASHVFDEMPVR 248

Query: 565 DVVAWNAMIS 594
           +VV+W+AMI+
Sbjct: 249 NVVSWSAMIA 258



 Score = 96.7 bits (239), Expect = 4e-18
 Identities = 53/157 (33%), Positives = 86/157 (54%), Gaps = 2/157 (1%)
 Frame = +1

Query: 130 KIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRTN 309
           +IHAHL   G       +T L++ Y+ FG  D A  +F+     +V+SW++MI  Y +  
Sbjct: 205 EIHAHLTRRGYNSHVYIMTTLLDMYARFGCVDYASHVFDEMPVRNVVSWSAMIACYAKNG 264

Query: 310 HNREALELYHRMLE--RGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLESDVFI 483
              EAL  +  M+   +    +  T   VL+AC     L++G  +H  I RRGL+S + +
Sbjct: 265 KAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPV 324

Query: 484 GTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
            + L+ MY + G +++ + VFD M   DVV+WN++IS
Sbjct: 325 ISALVTMYGRCGRLEVGQRVFDRMHERDVVSWNSLIS 361



 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 4/158 (2%)
 Frame = +1

Query: 94  LLRSCKDLNLLLK---IHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPS 264
           +L++C  L  L +   IH +++  GL      I+ LV  Y   G  +  + +F+      
Sbjct: 293 VLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGRLEVGQRVFDRMHERD 352

Query: 265 VISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHC 444
           V+SWNS+I +Y    + R+A++++  ML  G      TF  VL AC+    ++EG ++  
Sbjct: 353 VVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFE 412

Query: 445 EIAR-RGLESDVFIGTGLIDMYCKLGEIDIAREVFDEM 555
            + R  G++  V     ++D+  +   +D A ++  +M
Sbjct: 413 SMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDM 450



 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 33/114 (28%), Positives = 60/114 (52%)
 Frame = +1

Query: 247 NAENPSVISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKE 426
           +A + +  S N +I++  +  + ++AL    R+L +     + T+  +++ C     L +
Sbjct: 41  SASDGAKASNNQLIQSLCKEGNLKQAL----RVLSQESSPSQQTYELLIRCCGHRSSLSD 96

Query: 427 GVQVHCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAM 588
            ++VH  I   G + D F+ T LI MY  LG +D AR+VFD+     +  WNA+
Sbjct: 97  ALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDHARKVFDKTRKRTIYVWNAL 150


>ref|XP_006844721.1| hypothetical protein AMTR_s00016p00252780 [Amborella trichopoda]
           gi|548847192|gb|ERN06396.1| hypothetical protein
           AMTR_s00016p00252780 [Amborella trichopoda]
          Length = 428

 Score =  142 bits (359), Expect = 5e-32
 Identities = 71/180 (39%), Positives = 108/180 (60%)
 Frame = +1

Query: 55  SSKATIRHDYYSRLLRSCKDLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSAR 234
           SS  +  H     LL+ C   N LL+IHAHL  +GL +D I IT L+N  S     D A 
Sbjct: 24  SSNPSFSHYQALSLLQKCSTSNHLLQIHAHLFRTGLHRDYILITKLINLCSIHQKIDHAT 83

Query: 235 LIFNNAENPSVISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGAL 414
           L+FN  ENP   +WN+MIRAY ++N+  EA+ +Y+ M+  G   DK+T+ FV+KAC    
Sbjct: 84  LVFNQIENPLTFTWNTMIRAYFKSNYPEEAILMYNLMVIHGFLPDKFTYPFVIKACVAFS 143

Query: 415 DLKEGVQVHCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
            L++G ++H    + G+  D+F+   L+++Y K  E  +A ++FD+M V  VV+W  M++
Sbjct: 144 SLEKGKEIHGRAIKAGMVPDIFLQNTLMELYMKCNEKTLAHKLFDKMSVKSVVSWTTMVA 203



 Score =  105 bits (261), Expect = 1e-20
 Identities = 60/167 (35%), Positives = 87/167 (52%)
 Frame = +1

Query: 94  LLRSCKDLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVIS 273
           L   C +  L  K+   + V  +    ++ T +V    S G+  SAR +F+     +V+S
Sbjct: 173 LYMKCNEKTLAHKLFDKMSVKSV----VSWTTMVAGLVSHGDMASARRVFDEMPERNVVS 228

Query: 274 WNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIA 453
           W +MI  Y R N   EALEL+  ML   V  +++T   +L  CT    L+ G  VH  +A
Sbjct: 229 WTAMIHGYVRNNQPHEALELFILMLRANVRPNEFTIVSLLLVCTSLNSLRLGRWVHEFMA 288

Query: 454 RRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           + G E  V++GT LIDMY   G I+ A+ VFD M    V  WN+MI+
Sbjct: 289 KSGFELSVYLGTALIDMYSNCGSINDAKNVFDGMSERSVATWNSMIT 335


>ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 637

 Score =  139 bits (351), Expect = 5e-31
 Identities = 74/198 (37%), Positives = 114/198 (57%), Gaps = 3/198 (1%)
 Frame = +1

Query: 10  NSLAMATAPEITNLFSSKATIRHDYYSRLLRSC---KDLNLLLKIHAHLVVSGLAQDDIT 180
           N+ A A++P  +N   + +   + +Y+ +L+SC   + L    ++H  L+VSGL  D + 
Sbjct: 40  NAAAAASSPPSSNSHIASSPNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVL 99

Query: 181 ITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRTNHNREALELYHRMLERGV 360
            T LV+ Y++ G    AR +F+     +V  WN +IRAY R   +  A++LY  M++ GV
Sbjct: 100 ATKLVDLYAACGLVGHARRLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGV 159

Query: 361 EVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLESDVFIGTGLIDMYCKLGEIDIARE 540
           E D +T+   LKAC   LDL+ G +VH  +       D+F+  GL+DMY K G +D AR 
Sbjct: 160 EPDNFTYPLALKACAALLDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARA 219

Query: 541 VFDEMPVLDVVAWNAMIS 594
           VFD + V D V WN+MI+
Sbjct: 220 VFDRIRVRDSVVWNSMIA 237



 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 3/172 (1%)
 Frame = +1

Query: 85  YSRLLRSCK---DLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAE 255
           Y   L++C    DL    ++H  ++ +   +D      LV+ Y+  G  D AR +F+   
Sbjct: 166 YPLALKACAALLDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIR 225

Query: 256 NPSVISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQ 435
               + WNSMI AY +     EAL L   M   GV     T    + A   A  L  G +
Sbjct: 226 VRDSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRE 285

Query: 436 VHCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMI 591
           +H    RRG +    + T L+DMY K G + +AR +F+++   ++V+WNAMI
Sbjct: 286 LHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMI 337



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
 Frame = +1

Query: 157 GLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRTNHNREALELY 336
           G  + D   T LV+ Y+  G    AR++F       ++SWN+MI  Y    H  EAL+L+
Sbjct: 294 GFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLF 353

Query: 337 HRM-LERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLESDVFI-------GTG 492
           ++M +E  V  D  TF  VL AC     +KE  +        GL  DV+         T 
Sbjct: 354 NKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFF------GLMVDVYSIKPTVQHFTC 407

Query: 493 LIDMYCKLGEIDIAREVFDEMPVL-DVVAWNAMIS 594
           L+D+    G  + A ++   MP+  D   W A+++
Sbjct: 408 LVDVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLN 442


>dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 637

 Score =  138 bits (347), Expect = 1e-30
 Identities = 75/200 (37%), Positives = 110/200 (55%), Gaps = 3/200 (1%)
 Frame = +1

Query: 4   PFNSLAMATAPEITNLFSSKATIRHDYYSRLLRSCK---DLNLLLKIHAHLVVSGLAQDD 174
           P    A +  P  TN   + +   + +++ +L+SC     L    ++H  L+VSGL  D 
Sbjct: 38  PNTGFAASPPPPSTNPRLASSPHAYHHHTSILQSCVASGSLRAGRQLHGRLLVSGLGPDT 97

Query: 175 ITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRTNHNREALELYHRMLER 354
           +  T LV+ Y++ G    AR +F+     +V  WN +IRAY R      A+ LY  M+E 
Sbjct: 98  VLSTKLVDLYAACGQVGHARRLFDGMPKRNVFLWNVLIRAYAREGPREAAVRLYRGMVEH 157

Query: 355 GVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLESDVFIGTGLIDMYCKLGEIDIA 534
           GVE D +T+  VLKAC   LDL+ G +VH  ++      DVF+  G++DMY K G +D A
Sbjct: 158 GVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDA 217

Query: 535 REVFDEMPVLDVVAWNAMIS 594
           R VFD + V D V WN+MI+
Sbjct: 218 RAVFDGIAVRDAVVWNSMIA 237



 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 3/172 (1%)
 Frame = +1

Query: 85  YSRLLRSCK---DLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAE 255
           Y  +L++C    DL    ++H  +  +   QD      +V+ Y+  G  D AR +F+   
Sbjct: 166 YPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIA 225

Query: 256 NPSVISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQ 435
               + WNSMI AY +     EAL L   M   G+     T    + A   A  L  G +
Sbjct: 226 VRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRE 285

Query: 436 VHCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMI 591
           +H    RRG      + T L+DMY K G + +AR +F+++   ++V+WNAMI
Sbjct: 286 LHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMI 337


>ref|XP_002520500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540342|gb|EEF41913.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 414

 Score =  138 bits (347), Expect = 1e-30
 Identities = 75/190 (39%), Positives = 110/190 (57%), Gaps = 7/190 (3%)
 Frame = +1

Query: 46  NLFSSKATIRHDYYSRLLRSCKDLNLLLK---IHAHLVVSGLAQDDITITHLVNSYSSFG 216
           NL  ++       Y  LL SC   N  L    +H HL+ +G  QD    T L+N YSSFG
Sbjct: 61  NLLCNEPDPAQHTYELLLLSCTHQNSFLDAQFVHQHLLDNGFDQDPFLATKLINMYSSFG 120

Query: 217 NSDSARLIFNNAENPSVISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLK 396
           + D+AR +F+   + ++  +N++ RA T   +  E L LY RM   G+  D++T+T+VLK
Sbjct: 121 SIDNARKVFDKTRSRTLYVYNALFRALTLVGNGEEVLRLYRRMNSIGMPSDRFTYTYVLK 180

Query: 397 ACTGALD----LKEGVQVHCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVL 564
           AC  +      LK+G ++H +I RRG E+ V I T L+DMY + G +  A  VF EM V 
Sbjct: 181 ACVASNSLLSLLKKGKEIHAQILRRGYEAHVHIMTTLVDMYARFGYVSYASCVFSEMSVK 240

Query: 565 DVVAWNAMIS 594
           +VV+W+AMI+
Sbjct: 241 NVVSWSAMIA 250



 Score =  104 bits (259), Expect = 2e-20
 Identities = 60/179 (33%), Positives = 100/179 (55%), Gaps = 9/179 (5%)
 Frame = +1

Query: 85  YSRLLRSCKDLNLLL-------KIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIF 243
           Y+ +L++C   N LL       +IHA ++  G       +T LV+ Y+ FG    A  +F
Sbjct: 175 YTYVLKACVASNSLLSLLKKGKEIHAQILRRGYEAHVHIMTTLVDMYARFGYVSYASCVF 234

Query: 244 NNAENPSVISWNSMIRAYTRTNHNREALELYHRMLERGVEV--DKYTFTFVLKACTGALD 417
           +     +V+SW++MI  Y +     EALEL+  M+    ++  +  T   VL+AC     
Sbjct: 235 SEMSVKNVVSWSAMIACYAKNGRPFEALELFREMMLETKDMCPNSVTMVSVLQACAALAA 294

Query: 418 LKEGVQVHCEIARRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           L++G  +H  I RRGL+S + + + L+ MY + G++ +A+ VFD+M   DVV+WN++IS
Sbjct: 295 LEQGKLLHGYILRRGLDSILPVISSLVTMYARCGKLQLAQHVFDQMDKRDVVSWNSLIS 353


>ref|XP_006468953.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
           chloroplastic-like isoform X1 [Citrus sinensis]
           gi|568829286|ref|XP_006468954.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g26630,
           chloroplastic-like isoform X2 [Citrus sinensis]
           gi|568829288|ref|XP_006468955.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g26630,
           chloroplastic-like isoform X3 [Citrus sinensis]
          Length = 435

 Score =  136 bits (343), Expect = 4e-30
 Identities = 67/167 (40%), Positives = 103/167 (61%)
 Frame = +1

Query: 94  LLRSCKDLNLLLKIHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPSVIS 273
           LLR C++   L  IHA ++  GL+ D + +  L++  S +G +D A L+F+  + P V +
Sbjct: 36  LLRKCRNFGQLKLIHAKIIRHGLSNDQLLVRKLLDLCSFYGKTDHALLVFSQIQCPHVFT 95

Query: 274 WNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEGVQVHCEIA 453
           WN MIRA T    +++AL LY+ M+  G   DK+TF FV+KAC  +L +++G +VH    
Sbjct: 96  WNLMIRALTINGSSQQALLLYNLMICNGFRPDKFTFPFVIKACVASLAIEKGKEVHGLAV 155

Query: 454 RRGLESDVFIGTGLIDMYCKLGEIDIAREVFDEMPVLDVVAWNAMIS 594
           + G   D+F+   L+D+Y K G++D  R VFD+M V  VV+W  MIS
Sbjct: 156 KAGFSRDMFVQNTLMDLYFKCGDVDGGRMVFDKMRVRSVVSWTTMIS 202



 Score =  110 bits (274), Expect = 4e-22
 Identities = 52/140 (37%), Positives = 86/140 (61%)
 Frame = +1

Query: 175 ITITHLVNSYSSFGNSDSARLIFNNAENPSVISWNSMIRAYTRTNHNREALELYHRMLER 354
           ++ T +++  ++ G+ D+AR +F   +  +V+SW +MI AY R    +EA EL+ RML  
Sbjct: 195 VSWTTMISGLAASGDLDAARRVFEQMQTRNVVSWTAMINAYVRNERAQEAFELFQRMLLD 254

Query: 355 GVEVDKYTFTFVLKACTGALDLKEGVQVHCEIARRGLESDVFIGTGLIDMYCKLGEIDIA 534
            V  +++T   +L+ACT    LK G  +H    + G    V++GT LIDMY K G ++ A
Sbjct: 255 NVRPNEFTLVSLLQACTELRSLKLGNWIHDFALKNGFVLGVYLGTALIDMYSKCGSLEDA 314

Query: 535 REVFDEMPVLDVVAWNAMIS 594
           R+VFD+M + ++  WN+MI+
Sbjct: 315 RKVFDKMEIKNLATWNSMIT 334



 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
 Frame = +1

Query: 94  LLRSCKDLNLLLK---IHAHLVVSGLAQDDITITHLVNSYSSFGNSDSARLIFNNAENPS 264
           LL++C +L  L     IH   + +G        T L++ YS  G+ + AR +F+  E  +
Sbjct: 266 LLQACTELRSLKLGNWIHDFALKNGFVLGVYLGTALIDMYSKCGSLEDARKVFDKMEIKN 325

Query: 265 VISWNSMIRAYTRTNHNREALELYHRMLERGVEVDKYTFTFVLKACTGALDLKEG 429
           + +WNSMI +     H  EAL L+ +M    V  D  TF  VL AC    ++ EG
Sbjct: 326 LATWNSMITSLGVHGHGEEALALFAQMENANVHPDAITFVGVLCACVHENNVNEG 380