BLASTX nr result
ID: Cocculus23_contig00053574
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00053574
(516 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002524665.1| pentatricopeptide repeat-containing protein,... 108 8e-22
ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245... 104 1e-20
emb|CBI34885.3| unnamed protein product [Vitis vinifera] 104 1e-20
emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera] 104 1e-20
ref|XP_006470277.1| PREDICTED: pentatricopeptide repeat-containi... 103 3e-20
ref|XP_007031543.1| Pentatricopeptide repeat superfamily protein... 94 3e-17
gb|EPS64538.1| hypothetical protein M569_10241, partial [Genlise... 87 2e-15
ref|XP_004233703.1| PREDICTED: uncharacterized protein LOC101251... 75 7e-12
ref|XP_006446557.1| hypothetical protein CICLE_v10017927mg, part... 73 5e-11
ref|XP_007214997.1| hypothetical protein PRUPE_ppa002316mg [Prun... 73 5e-11
ref|XP_006849644.1| hypothetical protein AMTR_s00024p00225420 [A... 72 8e-11
emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera] 58 1e-06
ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containi... 58 2e-06
ref|XP_007032546.1| Pentatricopeptide repeat (PPR) superfamily p... 55 8e-06
>ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536026|gb|EEF37684.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 2000
Score = 108 bits (270), Expect = 8e-22
Identities = 48/99 (48%), Positives = 71/99 (71%)
Frame = -2
Query: 302 VKRAVRSLSSINTRTALKSYKENCIFLLKACSNQGWVSGGRNLHGHLIKMGISSDRYVAV 123
+K +++L +IN T K+Y + C+ LLK +NQG + G LH HL K GISS++Y+++
Sbjct: 1 MKNTLKTLLAINPATHFKTYAQTCVSLLKNLTNQGLIRDGSALHAHLFKTGISSEQYISI 60
Query: 122 KILLMYLNFKKHVEVDEIISEFGGFDLVVWNCMISARLE 6
K+L+MYLN++K E D+I +F GFDLVV NCMISA ++
Sbjct: 61 KLLIMYLNYRKSAEADQISKDFDGFDLVVHNCMISANVQ 99
>ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 104 bits (259), Expect = 1e-20
Identities = 47/94 (50%), Positives = 69/94 (73%)
Frame = -2
Query: 287 RSLSSINTRTALKSYKENCIFLLKACSNQGWVSGGRNLHGHLIKMGISSDRYVAVKILLM 108
R+L +I+ + + ++Y + C+ LLK SNQG ++ G LH HLIK G SS RY+A+K+L++
Sbjct: 6 RTLLAIDPKKSFRAYAQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLIL 65
Query: 107 YLNFKKHVEVDEIISEFGGFDLVVWNCMISARLE 6
YLN +K E+D+I+ EF G DLVV NCMISA ++
Sbjct: 66 YLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQ 99
>emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 104 bits (259), Expect = 1e-20
Identities = 47/94 (50%), Positives = 69/94 (73%)
Frame = -2
Query: 287 RSLSSINTRTALKSYKENCIFLLKACSNQGWVSGGRNLHGHLIKMGISSDRYVAVKILLM 108
R+L +I+ + + ++Y + C+ LLK SNQG ++ G LH HLIK G SS RY+A+K+L++
Sbjct: 6 RTLLAIDPKKSFRAYAQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLIL 65
Query: 107 YLNFKKHVEVDEIISEFGGFDLVVWNCMISARLE 6
YLN +K E+D+I+ EF G DLVV NCMISA ++
Sbjct: 66 YLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQ 99
>emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 104 bits (259), Expect = 1e-20
Identities = 47/94 (50%), Positives = 69/94 (73%)
Frame = -2
Query: 287 RSLSSINTRTALKSYKENCIFLLKACSNQGWVSGGRNLHGHLIKMGISSDRYVAVKILLM 108
R+L +I+ + + ++Y + C+ LLK SNQG ++ G LH HLIK G SS RY+A+K+L++
Sbjct: 6 RTLLAIDPKKSFRAYAQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLIL 65
Query: 107 YLNFKKHVEVDEIISEFGGFDLVVWNCMISARLE 6
YLN +K E+D+I+ EF G DLVV NCMISA ++
Sbjct: 66 YLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQ 99
>ref|XP_006470277.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Citrus sinensis]
Length = 734
Score = 103 bits (256), Expect = 3e-20
Identities = 49/99 (49%), Positives = 69/99 (69%)
Frame = -2
Query: 302 VKRAVRSLSSINTRTALKSYKENCIFLLKACSNQGWVSGGRNLHGHLIKMGISSDRYVAV 123
+K ++RSL SIN T+ SY E C+ LLK ++Q V GR LHGHLIK GI +RY+
Sbjct: 1 MKASLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTT 60
Query: 122 KILLMYLNFKKHVEVDEIISEFGGFDLVVWNCMISARLE 6
++L+MYL +K +E +EI+ + GFDLVV NCMI+A ++
Sbjct: 61 RLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANVQ 99
>ref|XP_007031543.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
gi|508710572|gb|EOY02469.1| Pentatricopeptide repeat
superfamily protein [Theobroma cacao]
Length = 728
Score = 93.6 bits (231), Expect = 3e-17
Identities = 45/96 (46%), Positives = 66/96 (68%)
Frame = -2
Query: 293 AVRSLSSINTRTALKSYKENCIFLLKACSNQGWVSGGRNLHGHLIKMGISSDRYVAVKIL 114
A+++L + R SY C LLK S++G VSGG LHG L K G+ S+R++A+K+L
Sbjct: 4 ALKALFLTDPRKNFNSYVHKCASLLKNFSDKGLVSGGTLLHGLLFKKGVFSERFIAIKLL 63
Query: 113 LMYLNFKKHVEVDEIISEFGGFDLVVWNCMISARLE 6
+MYLNF+K E ++I+ E GFDLVV NC+I+A ++
Sbjct: 64 IMYLNFRKLPEANQIVKELDGFDLVVRNCLINANVQ 99
>gb|EPS64538.1| hypothetical protein M569_10241, partial [Genlisea aurea]
Length = 683
Score = 87.0 bits (214), Expect = 2e-15
Identities = 42/93 (45%), Positives = 63/93 (67%)
Frame = -2
Query: 284 SLSSINTRTALKSYKENCIFLLKACSNQGWVSGGRNLHGHLIKMGISSDRYVAVKILLMY 105
SL S+N+R LK + I LL N+ + G+ H HLIK G+SS+ Y+AVK+L+MY
Sbjct: 5 SLFSLNSRNKLKDFVSKSIALLDFYKNEKLIGHGKAFHCHLIKSGLSSENYLAVKLLIMY 64
Query: 104 LNFKKHVEVDEIISEFGGFDLVVWNCMISARLE 6
++ ++ EV +++ EF GF+LVV NC+ISA L+
Sbjct: 65 IDCRRFNEVGQMLKEFDGFNLVVHNCLISAHLQ 97
>ref|XP_004233703.1| PREDICTED: uncharacterized protein LOC101251951 [Solanum
lycopersicum]
Length = 1933
Score = 75.5 bits (184), Expect = 7e-12
Identities = 38/99 (38%), Positives = 61/99 (61%)
Frame = -2
Query: 302 VKRAVRSLSSINTRTALKSYKENCIFLLKACSNQGWVSGGRNLHGHLIKMGISSDRYVAV 123
++ +RSL S NTR K + +L + + G HGHLIK G+SS + +A
Sbjct: 1 MRSVMRSLLS-NTRENFKDNVHKIVSILNDFIEKRLIVEGAMFHGHLIKKGVSSQKNIAA 59
Query: 122 KILLMYLNFKKHVEVDEIISEFGGFDLVVWNCMISARLE 6
K+L+MYL +K E+++++ EF GF+LV+ NC+I+A +E
Sbjct: 60 KLLIMYLKSRKPNEINQMLKEFEGFNLVIHNCLITANIE 98
>ref|XP_006446557.1| hypothetical protein CICLE_v10017927mg, partial [Citrus clementina]
gi|557549168|gb|ESR59797.1| hypothetical protein
CICLE_v10017927mg, partial [Citrus clementina]
Length = 735
Score = 72.8 bits (177), Expect = 5e-11
Identities = 31/59 (52%), Positives = 44/59 (74%)
Frame = -2
Query: 182 RNLHGHLIKMGISSDRYVAVKILLMYLNFKKHVEVDEIISEFGGFDLVVWNCMISARLE 6
R LHGHLIK GI +RY+ ++L+MYL +K +E +EI+ + GFDLVV NCMI+A ++
Sbjct: 1 RALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 59
>ref|XP_007214997.1| hypothetical protein PRUPE_ppa002316mg [Prunus persica]
gi|462411147|gb|EMJ16196.1| hypothetical protein
PRUPE_ppa002316mg [Prunus persica]
Length = 688
Score = 72.8 bits (177), Expect = 5e-11
Identities = 30/57 (52%), Positives = 45/57 (78%)
Frame = -2
Query: 176 LHGHLIKMGISSDRYVAVKILLMYLNFKKHVEVDEIISEFGGFDLVVWNCMISARLE 6
LH HLIKMG+SS+RY+A+++L+MYL+ +K +V EI+ F GFD V NC+I+A ++
Sbjct: 3 LHNHLIKMGLSSERYIAIRLLIMYLDSRKSAQVSEIVKGFDGFDPTVHNCLINANIQ 59
>ref|XP_006849644.1| hypothetical protein AMTR_s00024p00225420 [Amborella trichopoda]
gi|548853219|gb|ERN11225.1| hypothetical protein
AMTR_s00024p00225420 [Amborella trichopoda]
Length = 784
Score = 72.0 bits (175), Expect = 8e-11
Identities = 34/100 (34%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Frame = -2
Query: 308 DNVKRAVRSLSSINTRTALKSYKENCIFLLKACSNQGWVSGGRNLHGHLIKMGISSDRYV 129
D +K A+++LSS + ++ +Y C LL AC+ G+ +H HL K+G S R++
Sbjct: 14 DQLKSALKTLSSTHPSSSFNAYSNACASLLNACATNASTKHGKVIHAHLTKLGFLSHRFL 73
Query: 128 AVKILLMYLNFKKHVEVDEIISEFG--GFDLVVWNCMISA 15
++K+L+MY+ + + + +E G DL+ NCMISA
Sbjct: 74 SLKLLIMYVRCNSFHDANSLFNEMGDRSSDLIASNCMISA 113
>emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = -2
Query: 224 LLKACSNQGWVSGGRNLHGHLIKMGISSDRYVAVKILLMYLNFKKHVEVDEIISEFGG-F 48
+LKACS+ G V+ G +H HL+K G+ D ++ + MY +F + VE I+ + GG
Sbjct: 144 VLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEV 203
Query: 47 DLVVWNCMISARL 9
D V WN MI L
Sbjct: 204 DAVCWNAMIDGYL 216
>ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 57.8 bits (138), Expect = 2e-06
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = -2
Query: 224 LLKACSNQGWVSGGRNLHGHLIKMGISSDRYVAVKILLMYLNFKKHVEVDEIISEFGG-F 48
+LKACS+ G V+ G +H HL+K G+ D ++ + MY +F + VE I+ + GG
Sbjct: 143 VLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEV 202
Query: 47 DLVVWNCMISARL 9
D V WN MI L
Sbjct: 203 DAVCWNAMIDGYL 215
>ref|XP_007032546.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao] gi|508711575|gb|EOY03472.1| Pentatricopeptide
repeat (PPR) superfamily protein [Theobroma cacao]
Length = 480
Score = 55.5 bits (132), Expect = 8e-06
Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
Frame = -2
Query: 365 THQSL-RSFSSTTSTVSLRI------DNVKRAVRSLSSINTRTALKSYKENCIFLLKACS 207
TH L S +ST ST ++ I D ++A+ L + R L+ K F+LKAC+
Sbjct: 63 THTLLVNSLNSTPSTWNILIRGYASSDTPQKAIWVLKEMRKR-GLQRNKLTYPFVLKACA 121
Query: 206 NQGWVSGGRNLHGHLIKMGISSDRYVAVKILLMYLNFKKHVEVDEIISEFGGFDLVVWNC 27
++ GR +HG + K G+ D YV ++ Y KK ++ ++ G +V WN
Sbjct: 122 RGEALAEGRQVHGEIFKHGLDDDVYVENNLVHFYGCCKKIIDAKQVFDGMGERTVVSWNA 181
Query: 26 MISARLE 6
++SA +E
Sbjct: 182 VLSACVE 188