BLASTX nr result
ID: Cocculus23_contig00052883
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00052883
(274 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006648347.1| PREDICTED: pentatricopeptide repeat-containi... 69 9e-10
dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containi... 69 9e-10
gb|EEE56380.1| hypothetical protein OsJ_05522 [Oryza sativa Japo... 69 9e-10
ref|NP_001046005.1| Os02g0167200 [Oryza sativa Japonica Group] g... 69 9e-10
ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containi... 68 2e-09
emb|CBI31095.3| unnamed protein product [Vitis vinifera] 68 2e-09
ref|XP_004951798.1| PREDICTED: pentatricopeptide repeat-containi... 66 4e-09
ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containi... 66 6e-09
ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [S... 65 7e-09
gb|EMT12842.1| hypothetical protein F775_12293 [Aegilops tauschii] 65 1e-08
gb|AFW70245.1| hypothetical protein ZEAMMB73_875976 [Zea mays] 65 1e-08
ref|NP_001130303.1| uncharacterized protein LOC100191397 [Zea ma... 65 1e-08
ref|XP_006853296.1| hypothetical protein AMTR_s00032p00029450 [A... 59 7e-07
gb|ADE77782.1| unknown [Picea sitchensis] 57 3e-06
gb|ADE77505.1| unknown [Picea sitchensis] 57 3e-06
gb|ADE76509.1| unknown [Picea sitchensis] 56 6e-06
ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containi... 55 8e-06
>ref|XP_006648347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Oryza brachyantha]
Length = 668
Score = 68.6 bits (166), Expect = 9e-10
Identities = 34/47 (72%), Positives = 37/47 (78%)
Frame = +1
Query: 4 IYAALGRWDDASAVRALMCNRGVVKHPAYSWTEYKDGVQAFMVDEDL 144
IYA+LGR DASAVRALM NRGVVK YSW + KDGV AFMV +DL
Sbjct: 592 IYASLGRHSDASAVRALMSNRGVVKGRGYSWIDQKDGVHAFMVADDL 638
>dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group] gi|218190136|gb|EEC72563.1|
hypothetical protein OsI_05996 [Oryza sativa Indica
Group]
Length = 803
Score = 68.6 bits (166), Expect = 9e-10
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = +1
Query: 4 IYAALGRWDDASAVRALMCNRGVVKHPAYSWTEYKDGVQAFMVDEDL 144
IYA+LGR DASAVRALM NRGVVK YSW + KDGV+AFMV +DL
Sbjct: 730 IYASLGRHGDASAVRALMSNRGVVKGRGYSWIDQKDGVRAFMVADDL 776
>gb|EEE56380.1| hypothetical protein OsJ_05522 [Oryza sativa Japonica Group]
Length = 518
Score = 68.6 bits (166), Expect = 9e-10
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = +1
Query: 4 IYAALGRWDDASAVRALMCNRGVVKHPAYSWTEYKDGVQAFMVDEDL 144
IYA+LGR DASAVRALM NRGVVK YSW + KDGV+AFMV +DL
Sbjct: 437 IYASLGRHGDASAVRALMSNRGVVKGRGYSWIDQKDGVRAFMVADDL 483
>ref|NP_001046005.1| Os02g0167200 [Oryza sativa Japonica Group]
gi|113535536|dbj|BAF07919.1| Os02g0167200, partial
[Oryza sativa Japonica Group]
Length = 526
Score = 68.6 bits (166), Expect = 9e-10
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = +1
Query: 4 IYAALGRWDDASAVRALMCNRGVVKHPAYSWTEYKDGVQAFMVDEDL 144
IYA+LGR DASAVRALM NRGVVK YSW + KDGV+AFMV +DL
Sbjct: 453 IYASLGRHGDASAVRALMSNRGVVKGRGYSWIDQKDGVRAFMVADDL 499
>ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Vitis vinifera]
Length = 847
Score = 67.8 bits (164), Expect = 2e-09
Identities = 30/46 (65%), Positives = 37/46 (80%)
Frame = +1
Query: 4 IYAALGRWDDASAVRALMCNRGVVKHPAYSWTEYKDGVQAFMVDED 141
IY++LGRWDDA AVR LM VVK P YSW E+K+G+QAFMVD++
Sbjct: 732 IYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIEHKNGMQAFMVDDN 777
>emb|CBI31095.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 67.8 bits (164), Expect = 2e-09
Identities = 30/46 (65%), Positives = 37/46 (80%)
Frame = +1
Query: 4 IYAALGRWDDASAVRALMCNRGVVKHPAYSWTEYKDGVQAFMVDED 141
IY++LGRWDDA AVR LM VVK P YSW E+K+G+QAFMVD++
Sbjct: 703 IYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIEHKNGMQAFMVDDN 748
>ref|XP_004951798.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Setaria italica]
Length = 807
Score = 66.2 bits (160), Expect = 4e-09
Identities = 32/47 (68%), Positives = 38/47 (80%)
Frame = +1
Query: 4 IYAALGRWDDASAVRALMCNRGVVKHPAYSWTEYKDGVQAFMVDEDL 144
IYA+LGR DASAVRALM +RGVVK YSW ++KDG +AFMV +DL
Sbjct: 731 IYASLGRHGDASAVRALMSSRGVVKGRGYSWIDHKDGARAFMVADDL 777
>ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Brachypodium distachyon]
Length = 805
Score = 65.9 bits (159), Expect = 6e-09
Identities = 32/47 (68%), Positives = 37/47 (78%)
Frame = +1
Query: 4 IYAALGRWDDASAVRALMCNRGVVKHPAYSWTEYKDGVQAFMVDEDL 144
IYA+LGR DAS VRALM +RGVVK YSW ++KDGV AFMV +DL
Sbjct: 729 IYASLGRHGDASGVRALMSSRGVVKGRGYSWIDHKDGVHAFMVADDL 775
>ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
gi|241933187|gb|EES06332.1| hypothetical protein
SORBIDRAFT_04g004500 [Sorghum bicolor]
Length = 807
Score = 65.5 bits (158), Expect = 7e-09
Identities = 32/47 (68%), Positives = 36/47 (76%)
Frame = +1
Query: 4 IYAALGRWDDASAVRALMCNRGVVKHPAYSWTEYKDGVQAFMVDEDL 144
IYA LGR DASAVRALM +RGVVK YSW +KDG +AFMV +DL
Sbjct: 731 IYATLGRHGDASAVRALMSSRGVVKGRGYSWVNHKDGARAFMVADDL 777
>gb|EMT12842.1| hypothetical protein F775_12293 [Aegilops tauschii]
Length = 805
Score = 65.1 bits (157), Expect = 1e-08
Identities = 31/54 (57%), Positives = 39/54 (72%)
Frame = +1
Query: 4 IYAALGRWDDASAVRALMCNRGVVKHPAYSWTEYKDGVQAFMVDEDLTRIENSS 165
IYA+LGR DAS +RALM +RGVVK YSW ++KD V+AFMV +DL + S
Sbjct: 729 IYASLGRHGDASGIRALMISRGVVKGRGYSWIDHKDDVRAFMVADDLQTVSGES 782
>gb|AFW70245.1| hypothetical protein ZEAMMB73_875976 [Zea mays]
Length = 807
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/47 (68%), Positives = 36/47 (76%)
Frame = +1
Query: 4 IYAALGRWDDASAVRALMCNRGVVKHPAYSWTEYKDGVQAFMVDEDL 144
IYA LGR DASAVRALM +RGVVK YSW +KDG +AFMV +DL
Sbjct: 731 IYATLGRHGDASAVRALMSSRGVVKGRGYSWVNHKDGSRAFMVADDL 777
>ref|NP_001130303.1| uncharacterized protein LOC100191397 [Zea mays]
gi|194688792|gb|ACF78480.1| unknown [Zea mays]
Length = 706
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/47 (68%), Positives = 36/47 (76%)
Frame = +1
Query: 4 IYAALGRWDDASAVRALMCNRGVVKHPAYSWTEYKDGVQAFMVDEDL 144
IYA LGR DASAVRALM +RGVVK YSW +KDG +AFMV +DL
Sbjct: 630 IYATLGRHGDASAVRALMSSRGVVKGRGYSWVNHKDGSRAFMVADDL 676
>ref|XP_006853296.1| hypothetical protein AMTR_s00032p00029450 [Amborella trichopoda]
gi|548856949|gb|ERN14763.1| hypothetical protein
AMTR_s00032p00029450 [Amborella trichopoda]
Length = 841
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/59 (52%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
Frame = +1
Query: 4 IYAALGRWDDASAVRALMCNRGVVKHPAYSWTEYKDGVQA------FMVDEDLTRIENS 162
IYA +GRWD A AVR LM RGVVK+P SW E + G++A FM+ +D R ENS
Sbjct: 781 IYAEIGRWDVALAVRKLMRERGVVKNPGRSWIEVRSGIRALSVDDSFMMADDELRCENS 839
>gb|ADE77782.1| unknown [Picea sitchensis]
Length = 210
Score = 57.0 bits (136), Expect = 3e-06
Identities = 26/45 (57%), Positives = 32/45 (71%)
Frame = +1
Query: 4 IYAALGRWDDASAVRALMCNRGVVKHPAYSWTEYKDGVQAFMVDE 138
IYAA G+WDDA+ VR LM +RGV+K P YSW E K + AF+ E
Sbjct: 50 IYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGE 94
>gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 57.0 bits (136), Expect = 3e-06
Identities = 26/45 (57%), Positives = 32/45 (71%)
Frame = +1
Query: 4 IYAALGRWDDASAVRALMCNRGVVKHPAYSWTEYKDGVQAFMVDE 138
IYAA G+WDDA+ VR LM +RGV+K P YSW E K + AF+ E
Sbjct: 354 IYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGE 398
>gb|ADE76509.1| unknown [Picea sitchensis]
Length = 246
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +1
Query: 4 IYAALGRWDDASAVRALMCNRGVVKHPAYSWTEYKDGVQAFMVDE 138
IYAA GRWDD + VR +M +RGV K P SW E K+ V FMV++
Sbjct: 86 IYAAAGRWDDVAKVRKIMKDRGVQKQPGCSWIEVKNKVHTFMVED 130
>ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 55.5 bits (132), Expect = 8e-06
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +1
Query: 4 IYAALGRWDDASAVRALMCNRGVVKHPAYSWTEYKDGVQAFMVDE 138
+YA+LGRW+D + R LM +RGV K PA SWTE ++ V F+VD+
Sbjct: 637 MYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFLVDD 681