BLASTX nr result

ID: Cocculus23_contig00052446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00052446
         (437 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300416.2| hypothetical protein POPTR_0001s38460g [Popu...    57   3e-06

>ref|XP_002300416.2| hypothetical protein POPTR_0001s38460g [Populus trichocarpa]
           gi|550349181|gb|EEE85221.2| hypothetical protein
           POPTR_0001s38460g [Populus trichocarpa]
          Length = 413

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 44/153 (28%), Positives = 65/153 (42%), Gaps = 9/153 (5%)
 Frame = +2

Query: 2   QAKIPQRGLGVEKLEKIRLEEQRKNGITAR-------PIXXXXXXXXXXXXXXTSSSITV 160
           Q K+PQRGLGV +LEKIRLEEQ+KN ++                          S S ++
Sbjct: 36  QKKVPQRGLGVAQLEKIRLEEQQKNDVSVNLPSPASISQIKPSNLSMPIPNVYESRSTSI 95

Query: 161 PHLDLFGPPPPLLTXXXXXXXXXXXVINAAFGNVSSQSVFGWSGPVMADGYGCVPSTWNA 340
           P+L      P L +           +IN+    + S++  GW    +  G   VP  WN+
Sbjct: 96  PYL------PDLSSPNSMFRPQNIELINSN-STIPSENSVGWQSAAV-QGQKNVPKMWNS 147

Query: 341 QELTHDLEHTRIDS--EFTIGLNSQSDLKPNWP 433
            +   + E+  +D    F   LN   +  P WP
Sbjct: 148 SDYNLEKENCGVDPALAFRSNLNLPYESNPIWP 180


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